RNA–Protein interactions for RNA: ENST00000465385.5

MMP11-206, Transcript of matrix metallopeptidase 11, humanhuman

TSL 2

Gene MMP11, Length 3,823 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-206ENST00000465385 ABCA10Q8WWZ4 1543 aa18.31■□□□□ 0.52
MMP11-206ENST00000465385 ERCC6Q03468 1493 aa18.29■□□□□ 0.52
MMP11-206ENST00000465385 ZBTB47Q9UFB7 747 aaPredicted RBP18.27■□□□□ 0.52
MMP11-206ENST00000465385 DNMBPQ6XZF7 1577 aa18.26■□□□□ 0.51
MMP11-206ENST00000465385 SUPT6HQ7KZ85 1726 aaKnown RBP18.25■□□□□ 0.51
MMP11-206ENST00000465385 GAPVD1Q14C86 1478 aa18.25■□□□□ 0.51
MMP11-206ENST00000465385 NUDCQ9Y266 331 aa18.25■□□□□ 0.51
MMP11-206ENST00000465385 URB2Q14146 1524 aaKnown RBP18.24■□□□□ 0.51
MMP11-206ENST00000465385 EHBP1L1Q8N3D4 1523 aa18.23■□□□□ 0.51
MMP11-206ENST00000465385 CDK13Q14004 1512 aaKnown RBP18.23■□□□□ 0.51
MMP11-206ENST00000465385 NCOA1Q15788 1441 aa18.23■□□□□ 0.51
MMP11-206ENST00000465385 LAMC3Q9Y6N6 1575 aa18.21■□□□□ 0.51
MMP11-206ENST00000465385 KDM5BQ9UGL1 1544 aa18.21■□□□□ 0.51
MMP11-206ENST00000465385 CARD11Q9BXL7 1154 aa18.21■□□□□ 0.51
MMP11-206ENST00000465385 KDM6BO15054 1643 aa18.21■□□□□ 0.5
MMP11-206ENST00000465385 GRIN2BQ13224 1484 aa18.2■□□□□ 0.5
MMP11-206ENST00000465385 PKD2Q13563 968 aa18.2■□□□□ 0.5
MMP11-206ENST00000465385 CTTNBP2Q8WZ74 1663 aa18.2■□□□□ 0.5
MMP11-206ENST00000465385 PRDM2Q13029 1718 aa18.2■□□□□ 0.5
MMP11-206ENST00000465385 LAS1LQ9Y4W2 734 aaKnown RBP18.2■□□□□ 0.5
MMP11-206ENST00000465385 CFDP1Q9UEE9 299 aaPredicted RBP18.2■□□□□ 0.5
MMP11-206ENST00000465385 MYT1LQ9UL68 1186 aa18.18■□□□□ 0.5
MMP11-206ENST00000465385 CUL7Q14999 1698 aa18.18■□□□□ 0.5
MMP11-206ENST00000465385 CHMP7Q8WUX9 453 aaPredicted RBP18.18■□□□□ 0.5
MMP11-206ENST00000465385 MAGI3Q5TCQ9 1506 aa18.18■□□□□ 0.5
MMP11-206ENST00000465385 USP47Q96K76 1375 aa18.17■□□□□ 0.5
MMP11-206ENST00000465385 UGGT2Q9NYU1 1516 aa18.16■□□□□ 0.5
MMP11-206ENST00000465385 DENND4BO75064 1496 aaPredicted RBP18.16■□□□□ 0.5
MMP11-206ENST00000465385 ANKRD30BQ9BXX2 1392 aa18.15■□□□□ 0.5
MMP11-206ENST00000465385 IPO9Q96P70 1041 aaKnown RBP18.15■□□□□ 0.5
MMP11-206ENST00000465385 RTN4Q9NQC3 1192 aaKnown RBP18.15■□□□□ 0.5
MMP11-206ENST00000465385 EXOC6Q8TAG9 804 aa18.13■□□□□ 0.49
MMP11-206ENST00000465385 EPRSP07814 1512 aaKnown RBP18.12■□□□□ 0.49
MMP11-206ENST00000465385 RGL3Q3MIN7 710 aa18.11■□□□□ 0.49
MMP11-206ENST00000465385 DCAF11Q8TEB1 546 aa18.11■□□□□ 0.49
MMP11-206ENST00000465385 ST20-MTHFSA0A0A6YYL1 179 aa18.1■□□□□ 0.49
MMP11-206ENST00000465385 RPRD2Q5VT52 1461 aaKnown RBP18.09■□□□□ 0.49
MMP11-206ENST00000465385 DAPK1P53355 1430 aa18.09■□□□□ 0.49
MMP11-206ENST00000465385 SMG6Q86US8 1419 aaKnown RBP18.09■□□□□ 0.49
MMP11-206ENST00000465385 LRRIQ1Q96JM4 1722 aa18.08■□□□□ 0.49
MMP11-206ENST00000465385 THOC2Q8NI27 1593 aaKnown RBP18.07■□□□□ 0.48
MMP11-206ENST00000465385 PLIN1O60240 522 aa18.07■□□□□ 0.48
MMP11-206ENST00000465385 CC2D1BQ5T0F9 858 aaKnown RBP18.07■□□□□ 0.48
MMP11-206ENST00000465385 PNISRQ8TF01 805 aaKnown RBP18.07■□□□□ 0.48
MMP11-206ENST00000465385 SKAP1Q86WV1 359 aa18.06■□□□□ 0.48
MMP11-206ENST00000465385 HECW1Q76N89 1606 aa18.06■□□□□ 0.48
MMP11-206ENST00000465385 NEFMP07197 916 aa18.05■□□□□ 0.48
MMP11-206ENST00000465385 RCAN3Q9UKA8 241 aa18.05■□□□□ 0.48
MMP11-206ENST00000465385 SAMD9Q5K651 1589 aa18.05■□□□□ 0.48
MMP11-206ENST00000465385 ABCC5O15440 1437 aa18.05■□□□□ 0.48
MMP11-206ENST00000465385 MIA2Q96PC5 1412 aa18.04■□□□□ 0.48
MMP11-206ENST00000465385 MRC2Q9UBG0 1479 aa18.04■□□□□ 0.48
MMP11-206ENST00000465385 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.04■□□□□ 0.48
MMP11-206ENST00000465385 KIF21AQ7Z4S6 1674 aa18.04■□□□□ 0.48
MMP11-206ENST00000465385 RRP1P56182 461 aaKnown RBP18.03■□□□□ 0.48
MMP11-206ENST00000465385 NUP155O75694 1391 aa18.03■□□□□ 0.48
MMP11-206ENST00000465385 TCOF1Q13428 1488 aaKnown RBP18.02■□□□□ 0.48
MMP11-206ENST00000465385 TEX14Q8IWB6 1497 aa18.02■□□□□ 0.48
MMP11-206ENST00000465385 DHX29Q7Z478 1369 aaKnown RBP18.01■□□□□ 0.47
MMP11-206ENST00000465385 DAXXQ9UER7 740 aaPredicted RBP18.01■□□□□ 0.47
MMP11-206ENST00000465385 CDCA7LQ96GN5 454 aa18.01■□□□□ 0.47
MMP11-206ENST00000465385 TSPY4P0CV99 314 aa17.99■□□□□ 0.47
MMP11-206ENST00000465385 TSPY10P0CW01 314 aa17.99■□□□□ 0.47
MMP11-206ENST00000465385 GCC2Q8IWJ2 1684 aa17.99■□□□□ 0.47
MMP11-206ENST00000465385 SPATA31E1Q6ZUB1 1445 aa17.98■□□□□ 0.47
MMP11-206ENST00000465385 PDE4AP27815 886 aa17.98■□□□□ 0.47
MMP11-206ENST00000465385 PRG4Q92954 1404 aaPredicted RBP17.98■□□□□ 0.47
MMP11-206ENST00000465385 MYBBP1AQ9BQG0 1328 aaKnown RBP17.97■□□□□ 0.47
MMP11-206ENST00000465385 KIF15Q9NS87 1388 aa17.97■□□□□ 0.47
MMP11-206ENST00000465385 ZNF608Q9ULD9 1512 aaPredicted RBP17.97■□□□□ 0.47
MMP11-206ENST00000465385 ROCK2O75116 1388 aaKnown RBP17.96■□□□□ 0.47
MMP11-206ENST00000465385 IL27Q8NEV9 243 aa17.95■□□□□ 0.46
MMP11-206ENST00000465385 IQGAP2Q13576 1575 aa17.95■□□□□ 0.46
MMP11-206ENST00000465385 SLC4A3P48751 1232 aa17.95■□□□□ 0.46
MMP11-206ENST00000465385 ARHGEF11O15085 1522 aa17.94■□□□□ 0.46
MMP11-206ENST00000465385 ROCK1Q13464 1354 aa17.94■□□□□ 0.46
MMP11-206ENST00000465385 KIAA1107Q9UPP5 1409 aa17.93■□□□□ 0.46
MMP11-206ENST00000465385 ANKRD30AQ9BXX3 1397 aa17.93■□□□□ 0.46
MMP11-206ENST00000465385 TCERG1O14776 1098 aaKnown RBP17.93■□□□□ 0.46
MMP11-206ENST00000465385 HNRNPMP52272 730 aaKnown RBP eCLIP17.92■□□□□ 0.46
MMP11-206ENST00000465385 RALBP1Q15311 655 aa17.92■□□□□ 0.46
MMP11-206ENST00000465385 ABCA5Q8WWZ7 1642 aa17.92■□□□□ 0.46
MMP11-206ENST00000465385 NLRP13Q86W25 1043 aa17.91■□□□□ 0.46
MMP11-206ENST00000465385 PLEKHD1A6NEE1 506 aa17.91■□□□□ 0.46
MMP11-206ENST00000465385 KTN1Q86UP2 1357 aaKnown RBP17.91■□□□□ 0.46
MMP11-206ENST00000465385 CRBNQ96SW2 442 aa17.9■□□□□ 0.46
MMP11-206ENST00000465385 ANKRD50Q9ULJ7 1429 aa17.89■□□□□ 0.46
MMP11-206ENST00000465385 PZPP20742 1482 aa17.89■□□□□ 0.45
MMP11-206ENST00000465385 RNF123Q5XPI4 1314 aa17.88■□□□□ 0.45
MMP11-206ENST00000465385 NBPF1Q3BBV0 1214 aa17.88■□□□□ 0.45
MMP11-206ENST00000465385 RGS3P49796 1198 aa17.87■□□□□ 0.45
MMP11-206ENST00000465385 WDR62O43379 1518 aa17.87■□□□□ 0.45
MMP11-206ENST00000465385 IFT140Q96RY7 1462 aa17.87■□□□□ 0.45
MMP11-206ENST00000465385 CAMSAP2Q08AD1 1489 aa17.86■□□□□ 0.45
MMP11-206ENST00000465385 ANO8Q9HCE9 1232 aaPredicted RBP17.86■□□□□ 0.45
MMP11-206ENST00000465385 BRD4O60885 1362 aaPredicted RBP17.85■□□□□ 0.45
MMP11-206ENST00000465385 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.85■□□□□ 0.45
MMP11-206ENST00000465385 BCORL1Q5H9F3 1711 aa17.84■□□□□ 0.45
MMP11-206ENST00000465385 BACH2Q9BYV9 841 aa17.84■□□□□ 0.45
MMP11-206ENST00000465385 PANK3Q9H999 370 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms