RNA–Protein interactions for RNA: ENST00000463875.6

GTDC1-212, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene GTDC1, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-212ENST00000463875 MLECQ14165 292 aa12.12□□□□□ -0.47
GTDC1-212ENST00000463875 CFAP74Q9C0B2 1584 aa12.1□□□□□ -0.47
GTDC1-212ENST00000463875 CTTNBP2Q8WZ74 1663 aa12.1□□□□□ -0.47
GTDC1-212ENST00000463875 ARID3CA6NKF2 412 aa12.09□□□□□ -0.47
GTDC1-212ENST00000463875 UBAP1LF5GYI3 381 aa12.08□□□□□ -0.48
GTDC1-212ENST00000463875 CEBPAP49715 358 aaPredicted RBP12.08□□□□□ -0.48
GTDC1-212ENST00000463875 SIGLEC1Q9BZZ2 1709 aa12.07□□□□□ -0.48
GTDC1-212ENST00000463875 ATP10AO60312 1499 aa12.06□□□□□ -0.48
GTDC1-212ENST00000463875 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.06□□□□□ -0.48
GTDC1-212ENST00000463875 HNRNPUL2Q1KMD3 747 aaKnown RBP12.06□□□□□ -0.48
GTDC1-212ENST00000463875 MSH5O43196 834 aa12.05□□□□□ -0.48
GTDC1-212ENST00000463875 C9orf84Q5VXU9 1444 aa12.05□□□□□ -0.48
GTDC1-212ENST00000463875 MED1Q15648 1581 aaPredicted RBP12.04□□□□□ -0.48
GTDC1-212ENST00000463875 PLEKHD1A6NEE1 506 aa12.04□□□□□ -0.48
GTDC1-212ENST00000463875 NCOA1Q15788 1441 aa12.03□□□□□ -0.48
GTDC1-212ENST00000463875 HECW1Q76N89 1606 aa12.03□□□□□ -0.48
GTDC1-212ENST00000463875 TRAPPC8Q9Y2L5 1435 aa12.01□□□□□ -0.49
GTDC1-212ENST00000463875 RAPGEF6Q8TEU7 1601 aa12□□□□□ -0.49
GTDC1-212ENST00000463875 SCAPERQ9BY12 1400 aa11.99□□□□□ -0.49
GTDC1-212ENST00000463875 HSPA1LP34931 641 aa11.97□□□□□ -0.49
GTDC1-212ENST00000463875 NUP153P49790 1475 aaKnown RBP11.97□□□□□ -0.49
GTDC1-212ENST00000463875 P3H3Q8IVL6 736 aa11.97□□□□□ -0.49
GTDC1-212ENST00000463875 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.97□□□□□ -0.49
GTDC1-212ENST00000463875 ESF1Q9H501 851 aaKnown RBP11.97□□□□□ -0.49
GTDC1-212ENST00000463875 ZNF335Q9H4Z2 1342 aaPredicted RBP11.97□□□□□ -0.49
GTDC1-212ENST00000463875 PKD2Q13563 968 aa11.96□□□□□ -0.5
GTDC1-212ENST00000463875 TOM1O60784 492 aa11.95□□□□□ -0.5
GTDC1-212ENST00000463875 PLCH2O75038 1416 aa11.94□□□□□ -0.5
GTDC1-212ENST00000463875 PRXQ9BXM0 1461 aa11.94□□□□□ -0.5
GTDC1-212ENST00000463875 CNTLNQ9NXG0 1405 aa11.94□□□□□ -0.5
GTDC1-212ENST00000463875 C3P01024 1663 aa11.94□□□□□ -0.5
GTDC1-212ENST00000463875 NPATQ14207 1427 aa11.93□□□□□ -0.5
GTDC1-212ENST00000463875 CAMSAP1Q5T5Y3 1602 aa11.93□□□□□ -0.5
GTDC1-212ENST00000463875 REREQ9P2R6 1566 aa11.93□□□□□ -0.5
GTDC1-212ENST00000463875 ZNF518AQ6AHZ1 1483 aa11.92□□□□□ -0.5
GTDC1-212ENST00000463875 SAMD9Q5K651 1589 aa11.92□□□□□ -0.5
GTDC1-212ENST00000463875 AGLP35573 1532 aa11.92□□□□□ -0.5
GTDC1-212ENST00000463875 EFCAB2Q5VUJ9 269 aa11.92□□□□□ -0.5
GTDC1-212ENST00000463875 SCAF1Q9H7N4 1312 aaKnown RBP11.91□□□□□ -0.5
GTDC1-212ENST00000463875 PLA2R1Q13018 1463 aa11.91□□□□□ -0.5
GTDC1-212ENST00000463875 NCKAP5LQ9HCH0 1330 aa11.9□□□□□ -0.51
GTDC1-212ENST00000463875 PIP4K2BP78356 416 aa11.89□□□□□ -0.51
GTDC1-212ENST00000463875 KDM5CP41229 1560 aa11.88□□□□□ -0.51
GTDC1-212ENST00000463875 TCOF1Q13428 1488 aaKnown RBP11.87□□□□□ -0.51
GTDC1-212ENST00000463875 PPP6R1Q9UPN7 881 aa11.87□□□□□ -0.51
GTDC1-212ENST00000463875 CPS1P31327 1500 aa11.86□□□□□ -0.51
GTDC1-212ENST00000463875 PTPRKQ15262 1439 aa11.86□□□□□ -0.51
GTDC1-212ENST00000463875 DIP2CQ9Y2E4 1556 aa11.85□□□□□ -0.51
GTDC1-212ENST00000463875 MYT1LQ9UL68 1186 aa11.85□□□□□ -0.51
GTDC1-212ENST00000463875 MLH3Q9UHC1 1453 aa11.85□□□□□ -0.51
GTDC1-212ENST00000463875 AFAP1Q8N556 730 aa11.84□□□□□ -0.51
GTDC1-212ENST00000463875 MROH2AA6NES4 1674 aa11.83□□□□□ -0.52
GTDC1-212ENST00000463875 ZMYM3Q14202 1370 aa11.82□□□□□ -0.52
GTDC1-212ENST00000463875 ZNF142P52746 1687 aaPredicted RBP11.81□□□□□ -0.52
GTDC1-212ENST00000463875 MYO5CQ9NQX4 1742 aa11.8□□□□□ -0.52
GTDC1-212ENST00000463875 ABCA6Q8N139 1617 aa11.79□□□□□ -0.52
GTDC1-212ENST00000463875 RGS17Q9UGC6 210 aaPredicted RBP11.79□□□□□ -0.52
GTDC1-212ENST00000463875 CDK11AQ9UQ88 783 aaPredicted RBP11.79□□□□□ -0.52
GTDC1-212ENST00000463875 SHANK2Q9UPX8 1470 aa11.78□□□□□ -0.52
GTDC1-212ENST00000463875 CEP170BQ9Y4F5 1589 aaPredicted RBP11.78□□□□□ -0.52
GTDC1-212ENST00000463875 MYO3AQ8NEV4 1616 aa11.76□□□□□ -0.53
GTDC1-212ENST00000463875 ARHGAP5Q13017 1502 aa11.76□□□□□ -0.53
GTDC1-212ENST00000463875 SUPT6HQ7KZ85 1726 aaKnown RBP11.76□□□□□ -0.53
GTDC1-212ENST00000463875 CDK13Q14004 1512 aaKnown RBP11.74□□□□□ -0.53
GTDC1-212ENST00000463875 A2ML1A8K2U0 1454 aa11.73□□□□□ -0.53
GTDC1-212ENST00000463875 ALKQ9UM73 1620 aa11.73□□□□□ -0.53
GTDC1-212ENST00000463875 KIF14Q15058 1648 aa11.71□□□□□ -0.53
GTDC1-212ENST00000463875 CLIP1P30622 1438 aa11.7□□□□□ -0.54
GTDC1-212ENST00000463875 CSRNP3Q8WYN3 585 aa11.7□□□□□ -0.54
GTDC1-212ENST00000463875 KIDINS220Q9ULH0 1771 aa11.69□□□□□ -0.54
GTDC1-212ENST00000463875 DNMT1P26358 1616 aaKnown RBP11.69□□□□□ -0.54
GTDC1-212ENST00000463875 TROQ12816 1431 aaPredicted RBP11.69□□□□□ -0.54
GTDC1-212ENST00000463875 POTEAQ6S8J7 498 aa11.69□□□□□ -0.54
GTDC1-212ENST00000463875 ANKLE2Q86XL3 938 aa11.69□□□□□ -0.54
GTDC1-212ENST00000463875 ABCC1P33527 1531 aa11.68□□□□□ -0.54
GTDC1-212ENST00000463875 RANGAP1P46060 587 aaPredicted RBP11.68□□□□□ -0.54
GTDC1-212ENST00000463875 POLR1AO95602 1720 aaPredicted RBP11.68□□□□□ -0.54
GTDC1-212ENST00000463875 VWDEQ8N2E2 1590 aa11.68□□□□□ -0.54
GTDC1-212ENST00000463875 NEURL4Q96JN8 1562 aa11.68□□□□□ -0.54
GTDC1-212ENST00000463875 CLTCQ00610 1675 aaKnown RBP11.66□□□□□ -0.54
GTDC1-212ENST00000463875 MED14O60244 1454 aa11.66□□□□□ -0.54
GTDC1-212ENST00000463875 RNF17Q9BXT8 1623 aaKnown RBP11.66□□□□□ -0.54
GTDC1-212ENST00000463875 FMN1Q68DA7 1419 aa11.65□□□□□ -0.54
GTDC1-212ENST00000463875 THEMISQ8N1K5 641 aaPredicted RBP11.65□□□□□ -0.54
GTDC1-212ENST00000463875 ITSN2Q9NZM3 1697 aa11.65□□□□□ -0.55
GTDC1-212ENST00000463875 CDC42BPBQ9Y5S2 1711 aa11.64□□□□□ -0.55
GTDC1-212ENST00000463875 LRRC7Q96NW7 1537 aa11.63□□□□□ -0.55
GTDC1-212ENST00000463875 NPHP4O75161 1426 aaPredicted RBP11.63□□□□□ -0.55
GTDC1-212ENST00000463875 SPAG9O60271 1321 aaKnown RBP11.63□□□□□ -0.55
GTDC1-212ENST00000463875 SYNMO15061 1565 aa11.63□□□□□ -0.55
GTDC1-212ENST00000463875 GGT6Q6P531 493 aa11.62□□□□□ -0.55
GTDC1-212ENST00000463875 ATP1B4Q9UN42 357 aaPredicted RBP11.62□□□□□ -0.55
GTDC1-212ENST00000463875 DEPDC5O75140 1603 aa11.62□□□□□ -0.55
GTDC1-212ENST00000463875 PLXNC1O60486 1568 aa11.62□□□□□ -0.55
GTDC1-212ENST00000463875 SAMD9LQ8IVG5 1584 aa11.62□□□□□ -0.55
GTDC1-212ENST00000463875 PREX2Q70Z35 1606 aa11.62□□□□□ -0.55
GTDC1-212ENST00000463875 TNRQ92752 1358 aa11.61□□□□□ -0.55
GTDC1-212ENST00000463875 FAM135BQ49AJ0 1406 aa11.61□□□□□ -0.55
GTDC1-212ENST00000463875 A2MP01023 1474 aa11.61□□□□□ -0.55
GTDC1-212ENST00000463875 UPF1Q92900 1129 aaKnown RBP eCLIP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms