RNA–Protein interactions for RNA: ENST00000463009.1

ARPC1A-203, Transcript of actin related protein 2/3 complex subunit 1A, humanhuman

TSL 3

Gene ARPC1A, Length 719 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1A-203ENST00000463009 LRRC9Q6ZRR7 1453 aa17.12■□□□□ 0.33
ARPC1A-203ENST00000463009 SUPT6HQ7KZ85 1726 aaKnown RBP17.1■□□□□ 0.33
ARPC1A-203ENST00000463009 MYO5CQ9NQX4 1742 aa17.1■□□□□ 0.33
ARPC1A-203ENST00000463009 PIAS4Q8N2W9 510 aaPredicted RBP17.08■□□□□ 0.32
ARPC1A-203ENST00000463009 ARHGAP5Q13017 1502 aa17.06■□□□□ 0.32
ARPC1A-203ENST00000463009 KANK4Q5T7N3 995 aaPredicted RBP17.06■□□□□ 0.32
ARPC1A-203ENST00000463009 CFAP74Q9C0B2 1584 aa17.06■□□□□ 0.32
ARPC1A-203ENST00000463009 NCOA2Q15596 1464 aa17.05■□□□□ 0.32
ARPC1A-203ENST00000463009 CCNB3Q8WWL7 1395 aa17.05■□□□□ 0.32
ARPC1A-203ENST00000463009 PREX2Q70Z35 1606 aa17.05■□□□□ 0.32
ARPC1A-203ENST00000463009 PLCH2O75038 1416 aa17.04■□□□□ 0.32
ARPC1A-203ENST00000463009 FANCAO15360 1455 aa17.04■□□□□ 0.32
ARPC1A-203ENST00000463009 ARAP3Q8WWN8 1544 aa17.02■□□□□ 0.32
ARPC1A-203ENST00000463009 CDC42BPAQ5VT25 1732 aa17.02■□□□□ 0.32
ARPC1A-203ENST00000463009 ITSN2Q9NZM3 1697 aa17.02■□□□□ 0.32
ARPC1A-203ENST00000463009 NEO1Q92859 1461 aa17.02■□□□□ 0.32
ARPC1A-203ENST00000463009 GPATCH8Q9UKJ3 1502 aaKnown RBP17■□□□□ 0.31
ARPC1A-203ENST00000463009 CDC42BPBQ9Y5S2 1711 aa16.99■□□□□ 0.31
ARPC1A-203ENST00000463009 EFCAB2Q5VUJ9 269 aa16.99■□□□□ 0.31
ARPC1A-203ENST00000463009 AKNAQ7Z591 1439 aa16.98■□□□□ 0.31
ARPC1A-203ENST00000463009 CFDP1Q9UEE9 299 aaPredicted RBP16.97■□□□□ 0.31
ARPC1A-203ENST00000463009 ZNF777Q9ULD5 760 aaPredicted RBP16.97■□□□□ 0.31
ARPC1A-203ENST00000463009 PHLDB1Q86UU1 1377 aa16.97■□□□□ 0.31
ARPC1A-203ENST00000463009 PPARGC1BQ86YN6 1023 aaKnown RBP16.96■□□□□ 0.31
ARPC1A-203ENST00000463009 MYOM3Q5VTT5 1437 aa16.94■□□□□ 0.3
ARPC1A-203ENST00000463009 SAMD9LQ8IVG5 1584 aa16.93■□□□□ 0.3
ARPC1A-203ENST00000463009 DENND4BO75064 1496 aaPredicted RBP16.93■□□□□ 0.3
ARPC1A-203ENST00000463009 LMTK3Q96Q04 1460 aa16.93■□□□□ 0.3
ARPC1A-203ENST00000463009 ABCC1P33527 1531 aa16.92■□□□□ 0.3
ARPC1A-203ENST00000463009 SCAPERQ9BY12 1400 aa16.92■□□□□ 0.3
ARPC1A-203ENST00000463009 PLEKHH2Q8IVE3 1493 aa16.9■□□□□ 0.3
ARPC1A-203ENST00000463009 SYCP2Q9BX26 1530 aa16.9■□□□□ 0.3
ARPC1A-203ENST00000463009 POGZQ7Z3K3 1410 aa16.89■□□□□ 0.29
ARPC1A-203ENST00000463009 CAMSAP2Q08AD1 1489 aa16.89■□□□□ 0.29
ARPC1A-203ENST00000463009 RAPGEF3O95398 923 aa16.88■□□□□ 0.29
ARPC1A-203ENST00000463009 FRMPD1Q5SYB0 1578 aa16.88■□□□□ 0.29
ARPC1A-203ENST00000463009 MIA2Q96PC5 1412 aa16.87■□□□□ 0.29
ARPC1A-203ENST00000463009 PTPRMP28827 1452 aa16.86■□□□□ 0.29
ARPC1A-203ENST00000463009 RICTORQ6R327 1708 aa16.86■□□□□ 0.29
ARPC1A-203ENST00000463009 FGD6Q6ZV73 1430 aa16.86■□□□□ 0.29
ARPC1A-203ENST00000463009 ZNF518AQ6AHZ1 1483 aa16.86■□□□□ 0.29
ARPC1A-203ENST00000463009 ZNF644Q9H582 1327 aaPredicted RBP16.85■□□□□ 0.29
ARPC1A-203ENST00000463009 PTPN23Q9H3S7 1636 aa16.85■□□□□ 0.29
ARPC1A-203ENST00000463009 MYT1LQ9UL68 1186 aa16.84■□□□□ 0.29
ARPC1A-203ENST00000463009 KIAA1107Q9UPP5 1409 aa16.84■□□□□ 0.29
ARPC1A-203ENST00000463009 ARHGEF12Q9NZN5 1544 aa16.84■□□□□ 0.29
ARPC1A-203ENST00000463009 TRAPPC8Q9Y2L5 1435 aa16.83■□□□□ 0.28
ARPC1A-203ENST00000463009 HNRNPMP52272 730 aaKnown RBP eCLIP16.82■□□□□ 0.28
ARPC1A-203ENST00000463009 ADAMTSL3P82987 1691 aa16.81■□□□□ 0.28
ARPC1A-203ENST00000463009 ZMYM4Q5VZL5 1548 aa16.81■□□□□ 0.28
ARPC1A-203ENST00000463009 KDM5CP41229 1560 aa16.81■□□□□ 0.28
ARPC1A-203ENST00000463009 CCDC141Q6ZP82 1450 aa16.8■□□□□ 0.28
ARPC1A-203ENST00000463009 AFAP1Q8N556 730 aa16.8■□□□□ 0.28
ARPC1A-203ENST00000463009 ZFYVE16Q7Z3T8 1539 aa16.8■□□□□ 0.28
ARPC1A-203ENST00000463009 FAM50AQ14320 339 aaKnown RBP16.79■□□□□ 0.28
ARPC1A-203ENST00000463009 ARHGEF40Q8TER5 1519 aa16.79■□□□□ 0.28
ARPC1A-203ENST00000463009 TCOF1Q13428 1488 aaKnown RBP16.79■□□□□ 0.28
ARPC1A-203ENST00000463009 ARHGEF5Q12774 1597 aa16.77■□□□□ 0.28
ARPC1A-203ENST00000463009 MBD5Q9P267 1494 aa16.77■□□□□ 0.28
ARPC1A-203ENST00000463009 SPAG9O60271 1321 aaKnown RBP16.76■□□□□ 0.27
ARPC1A-203ENST00000463009 MAGI2Q86UL8 1455 aa16.76■□□□□ 0.27
ARPC1A-203ENST00000463009 YEATS2Q9ULM3 1422 aa16.75■□□□□ 0.27
ARPC1A-203ENST00000463009 SOCS7O14512 581 aa16.74■□□□□ 0.27
ARPC1A-203ENST00000463009 ATP7AQ04656 1500 aa16.74■□□□□ 0.27
ARPC1A-203ENST00000463009 MLH3Q9UHC1 1453 aa16.73■□□□□ 0.27
ARPC1A-203ENST00000463009 INO80Q9ULG1 1556 aaPredicted RBP16.73■□□□□ 0.27
ARPC1A-203ENST00000463009 RSPH4AQ5TD94 716 aa16.73■□□□□ 0.27
ARPC1A-203ENST00000463009 DNMT1P26358 1616 aaKnown RBP16.73■□□□□ 0.27
ARPC1A-203ENST00000463009 ABCA6Q8N139 1617 aa16.72■□□□□ 0.27
ARPC1A-203ENST00000463009 TSPY4P0CV99 314 aa16.72■□□□□ 0.27
ARPC1A-203ENST00000463009 TSPY10P0CW01 314 aa16.72■□□□□ 0.27
ARPC1A-203ENST00000463009 BCORL1Q5H9F3 1711 aa16.72■□□□□ 0.27
ARPC1A-203ENST00000463009 CROCC2H7BZ55 1655 aa16.72■□□□□ 0.27
ARPC1A-203ENST00000463009 ARID4BQ4LE39 1312 aaPredicted RBP16.71■□□□□ 0.27
ARPC1A-203ENST00000463009 DAPK1P53355 1430 aa16.71■□□□□ 0.27
ARPC1A-203ENST00000463009 C9orf84Q5VXU9 1444 aa16.71■□□□□ 0.27
ARPC1A-203ENST00000463009 MADDQ8WXG6 1647 aa16.71■□□□□ 0.27
ARPC1A-203ENST00000463009 DISP3Q9P2K9 1392 aa16.71■□□□□ 0.27
ARPC1A-203ENST00000463009 DIP2CQ9Y2E4 1556 aa16.71■□□□□ 0.27
ARPC1A-203ENST00000463009 KIDINS220Q9ULH0 1771 aa16.71■□□□□ 0.27
ARPC1A-203ENST00000463009 RRBP1Q9P2E9 1410 aaKnown RBP16.7■□□□□ 0.26
ARPC1A-203ENST00000463009 CERKQ8TCT0 537 aa16.7■□□□□ 0.26
ARPC1A-203ENST00000463009 SHANK2Q9UPX8 1470 aa16.69■□□□□ 0.26
ARPC1A-203ENST00000463009 ABCC5O15440 1437 aa16.69■□□□□ 0.26
ARPC1A-203ENST00000463009 ILDR2Q71H61 639 aa16.68■□□□□ 0.26
ARPC1A-203ENST00000463009 MAST1Q9Y2H9 1570 aa16.68■□□□□ 0.26
ARPC1A-203ENST00000463009 ATP10AO60312 1499 aa16.67■□□□□ 0.26
ARPC1A-203ENST00000463009 ITGAEP38570 1179 aa16.67■□□□□ 0.26
ARPC1A-203ENST00000463009 RTEL1-TNFRSF6BF6WH68 1400 aa16.67■□□□□ 0.26
ARPC1A-203ENST00000463009 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.65■□□□□ 0.26
ARPC1A-203ENST00000463009 HSPA2P54652 639 aa16.65■□□□□ 0.26
ARPC1A-203ENST00000463009 CHIC2Q9UKJ5 165 aa16.64■□□□□ 0.25
ARPC1A-203ENST00000463009 RIMS1Q86UR5 1692 aaKnown RBP16.64■□□□□ 0.25
ARPC1A-203ENST00000463009 ADGBQ8N7X0 1667 aa16.64■□□□□ 0.25
ARPC1A-203ENST00000463009 PLXNC1O60486 1568 aa16.64■□□□□ 0.25
ARPC1A-203ENST00000463009 A2MP01023 1474 aa16.63■□□□□ 0.25
ARPC1A-203ENST00000463009 REREQ9P2R6 1566 aa16.63■□□□□ 0.25
ARPC1A-203ENST00000463009 ANKRD30AQ9BXX3 1397 aa16.61■□□□□ 0.25
ARPC1A-203ENST00000463009 KIF15Q9NS87 1388 aa16.61■□□□□ 0.25
ARPC1A-203ENST00000463009 SIGLEC1Q9BZZ2 1709 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms