RNA–Protein interactions for RNA: ENST00000462725.6

PDCD10-203, Transcript of programmed cell death 10, humanhuman

TSL 5

Gene PDCD10, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD10-203ENST00000462725 ZFYVE16Q7Z3T8 1539 aa29.88■■■□□ 2.37
PDCD10-203ENST00000462725 ILDR1Q86SU0 546 aaPredicted RBP29.88■■■□□ 2.37
PDCD10-203ENST00000462725 CDK11AQ9UQ88 783 aaPredicted RBP29.87■■■□□ 2.37
PDCD10-203ENST00000462725 PCF11O94913 1555 aaKnown RBP29.86■■■□□ 2.37
PDCD10-203ENST00000462725 MYO5CQ9NQX4 1742 aa29.85■■■□□ 2.37
PDCD10-203ENST00000462725 EFCAB2Q5VUJ9 269 aa29.83■■■□□ 2.37
PDCD10-203ENST00000462725 RIMS1Q86UR5 1692 aaKnown RBP29.82■■■□□ 2.36
PDCD10-203ENST00000462725 MAGI2Q86UL8 1455 aa29.8■■■□□ 2.36
PDCD10-203ENST00000462725 CASKIN1Q8WXD9 1431 aa29.8■■■□□ 2.36
PDCD10-203ENST00000462725 ARHGAP5Q13017 1502 aa29.77■■■□□ 2.36
PDCD10-203ENST00000462725 MLECQ14165 292 aa29.77■■■□□ 2.36
PDCD10-203ENST00000462725 CLIP1P30622 1438 aa29.77■■■□□ 2.36
PDCD10-203ENST00000462725 PLPPR3Q6T4P5 718 aa29.75■■■□□ 2.35
PDCD10-203ENST00000462725 AFAP1Q8N556 730 aa29.75■■■□□ 2.35
PDCD10-203ENST00000462725 LMTK3Q96Q04 1460 aa29.73■■■□□ 2.35
PDCD10-203ENST00000462725 CDC42BPBQ9Y5S2 1711 aa29.71■■■□□ 2.35
PDCD10-203ENST00000462725 CCDC18Q5T9S5 1454 aa29.71■■■□□ 2.35
PDCD10-203ENST00000462725 ATP10AO60312 1499 aa29.7■■■□□ 2.35
PDCD10-203ENST00000462725 KDM5CP41229 1560 aa29.68■■■□□ 2.34
PDCD10-203ENST00000462725 ZNF518AQ6AHZ1 1483 aa29.68■■■□□ 2.34
PDCD10-203ENST00000462725 ARHGEF12Q9NZN5 1544 aa29.67■■■□□ 2.34
PDCD10-203ENST00000462725 C9orf84Q5VXU9 1444 aa29.67■■■□□ 2.34
PDCD10-203ENST00000462725 FYCO1Q9BQS8 1478 aa29.66■■■□□ 2.34
PDCD10-203ENST00000462725 PREX2Q70Z35 1606 aa29.65■■■□□ 2.34
PDCD10-203ENST00000462725 TRAPPC8Q9Y2L5 1435 aa29.63■■■□□ 2.33
PDCD10-203ENST00000462725 FER1L4A9Z1Z3 1794 aa29.62■■■□□ 2.33
PDCD10-203ENST00000462725 HSPA2P54652 639 aa29.61■■■□□ 2.33
PDCD10-203ENST00000462725 ABCC1P33527 1531 aa29.61■■■□□ 2.33
PDCD10-203ENST00000462725 DIP2CQ9Y2E4 1556 aa29.6■■■□□ 2.33
PDCD10-203ENST00000462725 CDC42BPAQ5VT25 1732 aa29.58■■■□□ 2.33
PDCD10-203ENST00000462725 MYT1LQ9UL68 1186 aa29.57■■■□□ 2.32
PDCD10-203ENST00000462725 ABCA6Q8N139 1617 aa29.56■■■□□ 2.32
PDCD10-203ENST00000462725 CEBPAP49715 358 aaPredicted RBP29.55■■■□□ 2.32
PDCD10-203ENST00000462725 ITSN2Q9NZM3 1697 aa29.54■■■□□ 2.32
PDCD10-203ENST00000462725 MLH3Q9UHC1 1453 aa29.54■■■□□ 2.32
PDCD10-203ENST00000462725 GPATCH8Q9UKJ3 1502 aaKnown RBP29.51■■■□□ 2.32
PDCD10-203ENST00000462725 ZNF777Q9ULD5 760 aaPredicted RBP29.5■■■□□ 2.31
PDCD10-203ENST00000462725 SAMD9LQ8IVG5 1584 aa29.49■■■□□ 2.31
PDCD10-203ENST00000462725 REREQ9P2R6 1566 aa29.47■■■□□ 2.31
PDCD10-203ENST00000462725 KIDINS220Q9ULH0 1771 aa29.46■■■□□ 2.31
PDCD10-203ENST00000462725 SYCP2Q9BX26 1530 aa29.45■■■□□ 2.3
PDCD10-203ENST00000462725 HNRNPMP52272 730 aaKnown RBP eCLIP29.43■■■□□ 2.32e-6■■■■□ 23.4
PDCD10-203ENST00000462725 CEP162Q5TB80 1403 aa29.39■■■□□ 2.3
PDCD10-203ENST00000462725 AGLP35573 1532 aa29.39■■■□□ 2.3
PDCD10-203ENST00000462725 MTUS2Q5JR59 1369 aa29.38■■■□□ 2.29
PDCD10-203ENST00000462725 CFDP1Q9UEE9 299 aaPredicted RBP29.37■■■□□ 2.29
PDCD10-203ENST00000462725 CCNB3Q8WWL7 1395 aa29.36■■■□□ 2.29
PDCD10-203ENST00000462725 PREX1Q8TCU6 1659 aa29.35■■■□□ 2.29
PDCD10-203ENST00000462725 FBXO41Q8TF61 875 aa29.35■■■□□ 2.29
PDCD10-203ENST00000462725 ZNF644Q9H582 1327 aaPredicted RBP29.33■■■□□ 2.29
PDCD10-203ENST00000462725 SPAG9O60271 1321 aaKnown RBP29.32■■■□□ 2.28
PDCD10-203ENST00000462725 C3P01024 1663 aa29.31■■■□□ 2.28
PDCD10-203ENST00000462725 TIAM1Q13009 1591 aa29.3■■■□□ 2.28
PDCD10-203ENST00000462725 KIAA1107Q9UPP5 1409 aa29.3■■■□□ 2.28
PDCD10-203ENST00000462725 ATP7AQ04656 1500 aa29.27■■■□□ 2.28
PDCD10-203ENST00000462725 EHBP1L1Q8N3D4 1523 aa29.27■■■□□ 2.28
PDCD10-203ENST00000462725 INO80Q9ULG1 1556 aaPredicted RBP29.26■■■□□ 2.28
PDCD10-203ENST00000462725 LOC105371045A0A1W2PR82 267 aa29.25■■■□□ 2.27
PDCD10-203ENST00000462725 UHRF1BP1Q6BDS2 1440 aa29.25■■■□□ 2.27
PDCD10-203ENST00000462725 PLEKHH2Q8IVE3 1493 aa29.24■■■□□ 2.27
PDCD10-203ENST00000462725 SUPT6HQ7KZ85 1726 aaKnown RBP29.23■■■□□ 2.27
PDCD10-203ENST00000462725 ESF1Q9H501 851 aaKnown RBP29.23■■■□□ 2.27
PDCD10-203ENST00000462725 STRCQ7RTU9 1775 aa29.21■■■□□ 2.27
PDCD10-203ENST00000462725 MBD5Q9P267 1494 aa29.21■■■□□ 2.27
PDCD10-203ENST00000462725 PLXNC1O60486 1568 aa29.21■■■□□ 2.27
PDCD10-203ENST00000462725 A2MP01023 1474 aa29.19■■■□□ 2.26
PDCD10-203ENST00000462725 CNTLNQ9NXG0 1405 aa29.17■■■□□ 2.26
PDCD10-203ENST00000462725 SETD1BQ9UPS6 1966 aaKnown RBP29.17■■■□□ 2.26
PDCD10-203ENST00000462725 NCOA2Q15596 1464 aa29.15■■■□□ 2.26
PDCD10-203ENST00000462725 CERKQ8TCT0 537 aa29.14■■■□□ 2.26
PDCD10-203ENST00000462725 ZMYM3Q14202 1370 aa29.13■■■□□ 2.25
PDCD10-203ENST00000462725 GGT6Q6P531 493 aa29.11■■■□□ 2.25
PDCD10-203ENST00000462725 CLTCQ00610 1675 aaKnown RBP29.1■■■□□ 2.25
PDCD10-203ENST00000462725 MROH2AA6NES4 1674 aa29.09■■■□□ 2.25
PDCD10-203ENST00000462725 CAMSAP2Q08AD1 1489 aa29.06■■■□□ 2.24
PDCD10-203ENST00000462725 VPS8Q8N3P4 1428 aa29.06■■■□□ 2.24
PDCD10-203ENST00000462725 ADGBQ8N7X0 1667 aa29.05■■■□□ 2.24
PDCD10-203ENST00000462725 NPATQ14207 1427 aa29.05■■■□□ 2.24
PDCD10-203ENST00000462725 RTEL1-TNFRSF6BF6WH68 1400 aa29.04■■■□□ 2.24
PDCD10-203ENST00000462725 DMRT2Q9Y5R5 561 aa29.02■■■□□ 2.24
PDCD10-203ENST00000462725 CCDC141Q6ZP82 1450 aa29.02■■■□□ 2.24
PDCD10-203ENST00000462725 PTPRKQ15262 1439 aa29.02■■■□□ 2.24
PDCD10-203ENST00000462725 NCOA1Q15788 1441 aa29.02■■■□□ 2.24
PDCD10-203ENST00000462725 DHX29Q7Z478 1369 aaKnown RBP29.01■■■□□ 2.23
PDCD10-203ENST00000462725 LRRC9Q6ZRR7 1453 aa29■■■□□ 2.23
PDCD10-203ENST00000462725 KANK4Q5T7N3 995 aaPredicted RBP29■■■□□ 2.23
PDCD10-203ENST00000462725 PTPRTO14522 1441 aa28.99■■■□□ 2.23
PDCD10-203ENST00000462725 CAMSAP1Q5T5Y3 1602 aa28.98■■■□□ 2.23
PDCD10-203ENST00000462725 MYO3AQ8NEV4 1616 aa28.95■■■□□ 2.23
PDCD10-203ENST00000462725 KIF3BO15066 747 aa28.93■■■□□ 2.22
PDCD10-203ENST00000462725 NCKAP5LQ9HCH0 1330 aa28.93■■■□□ 2.22
PDCD10-203ENST00000462725 PPP6R1Q9UPN7 881 aa28.91■■■□□ 2.22
PDCD10-203ENST00000462725 ARHGEF5Q12774 1597 aa28.9■■■□□ 2.22
PDCD10-203ENST00000462725 LTBP4Q8N2S1 1624 aa28.9■■■□□ 2.22
PDCD10-203ENST00000462725 CEP170BQ9Y4F5 1589 aaPredicted RBP28.89■■■□□ 2.22
PDCD10-203ENST00000462725 ZNF142P52746 1687 aaPredicted RBP28.89■■■□□ 2.21
PDCD10-203ENST00000462725 RSPH4AQ5TD94 716 aa28.88■■■□□ 2.21
PDCD10-203ENST00000462725 FBXO31Q5XUX0 539 aaPredicted RBP28.88■■■□□ 2.21
PDCD10-203ENST00000462725 MAP3K1Q13233 1512 aa28.84■■■□□ 2.21
PDCD10-203ENST00000462725 TSPY4P0CV99 314 aa28.82■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms