RNA–Protein interactions for RNA: ENST00000462725.6

PDCD10-203, Transcript of programmed cell death 10, humanhuman

TSL 5

Gene PDCD10, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD10-203ENST00000462725 NISCHQ9Y2I1 1504 aa45.67■■■■■ 4.9
PDCD10-203ENST00000462725 ABCC9O60706 1549 aa40.93■■■■■ 4.14
PDCD10-203ENST00000462725 CCDC180Q9P1Z9 1646 aa40.84■■■■■ 4.13
PDCD10-203ENST00000462725 RB1CC1Q8TDY2 1594 aa38.85■■■■□ 3.81
PDCD10-203ENST00000462725 NACADO15069 1562 aa38.61■■■■□ 3.77
PDCD10-203ENST00000462725 DCAF8L2P0C7V8 631 aa38.56■■■■□ 3.76
PDCD10-203ENST00000462725 DNAJC5BQ9UF47 199 aa38.42■■■■□ 3.74
PDCD10-203ENST00000462725 PABPN1Q86U42 306 aaKnown RBP eCLIP38.17■■■■□ 3.7
PDCD10-203ENST00000462725 MYO15BQ96JP2 1530 aa38.07■■■■□ 3.69
PDCD10-203ENST00000462725 UNC13AQ9UPW8 1703 aa38.05■■■■□ 3.68
PDCD10-203ENST00000462725 ZCCHC6Q5VYS8 1495 aaKnown RBP37.88■■■■□ 3.65
PDCD10-203ENST00000462725 BICRAQ9NZM4 1560 aa37.85■■■■□ 3.65
PDCD10-203ENST00000462725 DCAF1Q9Y4B6 1507 aa37.65■■■■□ 3.62
PDCD10-203ENST00000462725 SCRIBQ14160 1630 aa37.36■■■■□ 3.57
PDCD10-203ENST00000462725 SHROOM4Q9ULL8 1493 aa37.14■■■■□ 3.54
PDCD10-203ENST00000462725 CC2D2AQ9P2K1 1620 aa36.93■■■■□ 3.5
PDCD10-203ENST00000462725 EIF4G1Q04637 1599 aaKnown RBP36.87■■■■□ 3.49
PDCD10-203ENST00000462725 CECR2Q9BXF3 1484 aa36.81■■■■□ 3.48
PDCD10-203ENST00000462725 NCAPD3P42695 1498 aa35.69■■■■□ 3.3
PDCD10-203ENST00000462725 ATAD2BQ9ULI0 1458 aa35.64■■■■□ 3.3
PDCD10-203ENST00000462725 SMARCA4P51532 1647 aa35.6■■■■□ 3.29
PDCD10-203ENST00000462725 SMARCA2P51531 1590 aa35.45■■■■□ 3.27
PDCD10-203ENST00000462725 HMGXB3Q12766 1538 aa35.4■■■■□ 3.26
PDCD10-203ENST00000462725 BAZ1AQ9NRL2 1556 aaPredicted RBP35.38■■■■□ 3.25
PDCD10-203ENST00000462725 BAZ1BQ9UIG0 1483 aaKnown RBP35.26■■■■□ 3.23
PDCD10-203ENST00000462725 MROH2BQ7Z745 1585 aa35.25■■■■□ 3.23
PDCD10-203ENST00000462725 ERCC6Q03468 1493 aa35.23■■■■□ 3.23
PDCD10-203ENST00000462725 PEG3Q9GZU2 1588 aa35.22■■■■□ 3.23
PDCD10-203ENST00000462725 NESP48681 1621 aa35.22■■■■□ 3.23
PDCD10-203ENST00000462725 CUX2O14529 1486 aa35.1■■■■□ 3.21
PDCD10-203ENST00000462725 DNAJC5Q9H3Z4 198 aa35.07■■■■□ 3.2
PDCD10-203ENST00000462725 LAMC3Q9Y6N6 1575 aa34.83■■■■□ 3.17
PDCD10-203ENST00000462725 WIZO95785 1651 aa34.82■■■■□ 3.17
PDCD10-203ENST00000462725 THOC2Q8NI27 1593 aaKnown RBP34.77■■■■□ 3.16
PDCD10-203ENST00000462725 KIF21AQ7Z4S6 1674 aa34.7■■■■□ 3.14
PDCD10-203ENST00000462725 PDS5BQ9NTI5 1447 aa34.63■■■■□ 3.13
PDCD10-203ENST00000462725 CADPSQ9ULU8 1353 aa34.62■■■■□ 3.13
PDCD10-203ENST00000462725 RSF1Q96T23 1441 aaPredicted RBP34.55■■■■□ 3.12
PDCD10-203ENST00000462725 MRC2Q9UBG0 1479 aa34.37■■■■□ 3.09
PDCD10-203ENST00000462725 TOP2AP11388 1531 aaKnown RBP34.32■■■■□ 3.08
PDCD10-203ENST00000462725 WDR62O43379 1518 aa34.29■■■■□ 3.08
PDCD10-203ENST00000462725 CFTRP13569 1480 aa34.26■■■■□ 3.07
PDCD10-203ENST00000462725 FANCD2Q9BXW9 1451 aa34.24■■■■□ 3.07
PDCD10-203ENST00000462725 CEP164Q9UPV0 1460 aa34.24■■■■□ 3.07
PDCD10-203ENST00000462725 URB2Q14146 1524 aaKnown RBP34■■■■□ 3.03
PDCD10-203ENST00000462725 CCDC88BA6NC98 1476 aa34■■■■□ 3.03
PDCD10-203ENST00000462725 PRDM2Q13029 1718 aa33.82■■■■□ 3
PDCD10-203ENST00000462725 TRIM41Q8WV44 630 aa33.63■■■□□ 2.97
PDCD10-203ENST00000462725 TOPBP1Q92547 1522 aa33.61■■■□□ 2.97
PDCD10-203ENST00000462725 ZNF608Q9ULD9 1512 aaPredicted RBP33.6■■■□□ 2.97
PDCD10-203ENST00000462725 OSCARQ8IYS5 282 aa33.55■■■□□ 2.96
PDCD10-203ENST00000462725 IFT140Q96RY7 1462 aa33.54■■■□□ 2.96
PDCD10-203ENST00000462725 DNMBPQ6XZF7 1577 aa33.46■■■□□ 2.95
PDCD10-203ENST00000462725 ABCC8Q09428 1581 aa33.41■■■□□ 2.94
PDCD10-203ENST00000462725 EIF4G3O43432 1585 aaKnown RBP33.34■■■□□ 2.93
PDCD10-203ENST00000462725 TARBP1Q13395 1621 aaKnown RBP33.31■■■□□ 2.92
PDCD10-203ENST00000462725 AQRO60306 1485 aaKnown RBP eCLIP33.3■■■□□ 2.92
PDCD10-203ENST00000462725 POLA1P09884 1462 aaPredicted RBP33.29■■■□□ 2.92
PDCD10-203ENST00000462725 RAD54L2Q9Y4B4 1467 aa33.23■■■□□ 2.91
PDCD10-203ENST00000462725 RIMBP3CA6NJZ7 1639 aa33.15■■■□□ 2.9
PDCD10-203ENST00000462725 RIMBP3BA6NNM3 1639 aa33.15■■■□□ 2.9
PDCD10-203ENST00000462725 RIMBP3Q9UFD9 1639 aa33.15■■■□□ 2.9
PDCD10-203ENST00000462725 SUPT5HO00267 1087 aaKnown RBP33.11■■■□□ 2.89
PDCD10-203ENST00000462725 CUX1P39880 1505 aa33.11■■■□□ 2.89
PDCD10-203ENST00000462725 SOGA1O94964 1423 aa33.11■■■□□ 2.89
PDCD10-203ENST00000462725 TDRD9Q8NDG6 1382 aaKnown RBP33.1■■■□□ 2.89
PDCD10-203ENST00000462725 FGD5Q6ZNL6 1462 aa33.1■■■□□ 2.89
PDCD10-203ENST00000462725 CHD1O14646 1710 aa33.07■■■□□ 2.88
PDCD10-203ENST00000462725 ARHGEF11O15085 1522 aa33.06■■■□□ 2.88
PDCD10-203ENST00000462725 FBLN2P98095 1184 aa33.01■■■□□ 2.87
PDCD10-203ENST00000462725 SNAPC4Q5SXM2 1469 aa32.92■■■□□ 2.86
PDCD10-203ENST00000462725 CYB5RLQ6IPT4 315 aa32.84■■■□□ 2.85
PDCD10-203ENST00000462725 WDR97A6NE52 1622 aa32.83■■■□□ 2.85
PDCD10-203ENST00000462725 GRIN2BQ13224 1484 aa32.79■■■□□ 2.84
PDCD10-203ENST00000462725 ARAP1Q96P48 1450 aa32.78■■■□□ 2.84
PDCD10-203ENST00000462725 MAGI1Q96QZ7 1491 aaPredicted RBP32.75■■■□□ 2.83
PDCD10-203ENST00000462725 CHMP7Q8WUX9 453 aaPredicted RBP32.74■■■□□ 2.83
PDCD10-203ENST00000462725 GAPVD1Q14C86 1478 aa32.71■■■□□ 2.83
PDCD10-203ENST00000462725 CLASP1Q7Z460 1538 aa32.71■■■□□ 2.83
PDCD10-203ENST00000462725 ABCA10Q8WWZ4 1543 aa32.68■■■□□ 2.82
PDCD10-203ENST00000462725 SYNJ2O15056 1496 aa32.67■■■□□ 2.82
PDCD10-203ENST00000462725 PBRM1Q86U86 1689 aa32.66■■■□□ 2.82
PDCD10-203ENST00000462725 ABCA5Q8WWZ7 1642 aa32.64■■■□□ 2.82
PDCD10-203ENST00000462725 SYNJ1O43426 1573 aa32.62■■■□□ 2.81
PDCD10-203ENST00000462725 WRNQ14191 1432 aaPredicted RBP eCLIP32.54■■■□□ 2.8
PDCD10-203ENST00000462725 TOP2BQ02880 1626 aa32.53■■■□□ 2.8
PDCD10-203ENST00000462725 BIVM-ERCC5R4GMW8 1640 aa32.52■■■□□ 2.8
PDCD10-203ENST00000462725 TRHP20396 242 aaPredicted RBP32.4■■■□□ 2.78
PDCD10-203ENST00000462725 GRIN2AQ12879 1464 aa32.4■■■□□ 2.78
PDCD10-203ENST00000462725 ADAMTS12P58397 1594 aa32.39■■■□□ 2.78
PDCD10-203ENST00000462725 CEP170Q5SW79 1584 aa32.32■■■□□ 2.76
PDCD10-203ENST00000462725 ERCC6L2Q5T890 1561 aa32.31■■■□□ 2.76
PDCD10-203ENST00000462725 NUP160Q12769 1436 aa32.29■■■□□ 2.76
PDCD10-203ENST00000462725 FHAD1B1AJZ9 1412 aa32.27■■■□□ 2.76
PDCD10-203ENST00000462725 ERICH3Q5RHP9 1530 aa32.24■■■□□ 2.75
PDCD10-203ENST00000462725 SHROOM2Q13796 1616 aa32.11■■■□□ 2.73
PDCD10-203ENST00000462725 PRG4Q92954 1404 aaPredicted RBP31.98■■■□□ 2.71
PDCD10-203ENST00000462725 JPH4Q96JJ6 628 aa31.95■■■□□ 2.71
PDCD10-203ENST00000462725 RUSC2Q8N2Y8 1516 aa31.94■■■□□ 2.7
PDCD10-203ENST00000462725 IGF1RP08069 1367 aa31.94■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms