RNA–Protein interactions for RNA: ENST00000462356.5

LRRC47-202, Transcript of leucine rich repeat containing 47, humanhuman

TSL 2

Gene LRRC47, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC47-202ENST00000462356 SCAPERQ9BY12 1400 aa21.15■□□□□ 0.98
LRRC47-202ENST00000462356 KDM4FA0A1W2PPD8 638 aa21.14■□□□□ 0.97
LRRC47-202ENST00000462356 CDC42BPAQ5VT25 1732 aa21.12■□□□□ 0.97
LRRC47-202ENST00000462356 RICTORQ6R327 1708 aa21.12■□□□□ 0.97
LRRC47-202ENST00000462356 ZNF777Q9ULD5 760 aaPredicted RBP21.12■□□□□ 0.97
LRRC47-202ENST00000462356 PREX2Q70Z35 1606 aa21.11■□□□□ 0.97
LRRC47-202ENST00000462356 TIAM1Q13009 1591 aa21.1■□□□□ 0.97
LRRC47-202ENST00000462356 EHBP1L1Q8N3D4 1523 aa21.09■□□□□ 0.97
LRRC47-202ENST00000462356 GPATCH8Q9UKJ3 1502 aaKnown RBP21.09■□□□□ 0.97
LRRC47-202ENST00000462356 CCNB3Q8WWL7 1395 aa21.08■□□□□ 0.96
LRRC47-202ENST00000462356 KANK4Q5T7N3 995 aaPredicted RBP21.07■□□□□ 0.96
LRRC47-202ENST00000462356 POGZQ7Z3K3 1410 aa21.06■□□□□ 0.96
LRRC47-202ENST00000462356 AFAP1Q8N556 730 aa21.06■□□□□ 0.96
LRRC47-202ENST00000462356 CFDP1Q9UEE9 299 aaPredicted RBP21.04■□□□□ 0.96
LRRC47-202ENST00000462356 ARHGEF12Q9NZN5 1544 aa21.04■□□□□ 0.96
LRRC47-202ENST00000462356 YEATS2Q9ULM3 1422 aa21.04■□□□□ 0.96
LRRC47-202ENST00000462356 MYT1LQ9UL68 1186 aa21.03■□□□□ 0.96
LRRC47-202ENST00000462356 SAMD9LQ8IVG5 1584 aa21.02■□□□□ 0.95
LRRC47-202ENST00000462356 LRRC9Q6ZRR7 1453 aa21.01■□□□□ 0.95
LRRC47-202ENST00000462356 TRAPPC8Q9Y2L5 1435 aa21.01■□□□□ 0.95
LRRC47-202ENST00000462356 ARID4BQ4LE39 1312 aaPredicted RBP21.01■□□□□ 0.95
LRRC47-202ENST00000462356 NCOA2Q15596 1464 aa21.01■□□□□ 0.95
LRRC47-202ENST00000462356 ABCC1P33527 1531 aa21■□□□□ 0.95
LRRC47-202ENST00000462356 ZMYM4Q5VZL5 1548 aa21■□□□□ 0.95
LRRC47-202ENST00000462356 HNRNPMP52272 730 aaKnown RBP eCLIP21■□□□□ 0.95
LRRC47-202ENST00000462356 APLP2Q06481 763 aa21■□□□□ 0.95
LRRC47-202ENST00000462356 SUPT6HQ7KZ85 1726 aaKnown RBP21■□□□□ 0.95
LRRC47-202ENST00000462356 ZNF644Q9H582 1327 aaPredicted RBP21■□□□□ 0.95
LRRC47-202ENST00000462356 ZFYVE16Q7Z3T8 1539 aa20.99■□□□□ 0.95
LRRC47-202ENST00000462356 ITSN2Q9NZM3 1697 aa20.99■□□□□ 0.95
LRRC47-202ENST00000462356 ARHGEF40Q8TER5 1519 aa20.99■□□□□ 0.95
LRRC47-202ENST00000462356 ZNF518AQ6AHZ1 1483 aa20.98■□□□□ 0.95
LRRC47-202ENST00000462356 MAP3K1Q13233 1512 aa20.96■□□□□ 0.95
LRRC47-202ENST00000462356 SYCP2Q9BX26 1530 aa20.96■□□□□ 0.95
LRRC47-202ENST00000462356 SIGLEC1Q9BZZ2 1709 aa20.94■□□□□ 0.94
LRRC47-202ENST00000462356 MAGI2Q86UL8 1455 aa20.94■□□□□ 0.94
LRRC47-202ENST00000462356 KDM5CP41229 1560 aa20.93■□□□□ 0.94
LRRC47-202ENST00000462356 MLECQ14165 292 aa20.91■□□□□ 0.94
LRRC47-202ENST00000462356 HECW2Q9P2P5 1572 aa20.9■□□□□ 0.94
LRRC47-202ENST00000462356 ATP10AO60312 1499 aa20.89■□□□□ 0.94
LRRC47-202ENST00000462356 PLEKHH2Q8IVE3 1493 aa20.88■□□□□ 0.93
LRRC47-202ENST00000462356 KIAA1107Q9UPP5 1409 aa20.87■□□□□ 0.93
LRRC47-202ENST00000462356 MLH3Q9UHC1 1453 aa20.87■□□□□ 0.93
LRRC47-202ENST00000462356 BCORL1Q5H9F3 1711 aa20.87■□□□□ 0.93
LRRC47-202ENST00000462356 ABCA6Q8N139 1617 aa20.86■□□□□ 0.93
LRRC47-202ENST00000462356 SPAG9O60271 1321 aaKnown RBP20.86■□□□□ 0.93
LRRC47-202ENST00000462356 DIP2CQ9Y2E4 1556 aa20.86■□□□□ 0.93
LRRC47-202ENST00000462356 KIDINS220Q9ULH0 1771 aa20.86■□□□□ 0.93
LRRC47-202ENST00000462356 C9orf84Q5VXU9 1444 aa20.86■□□□□ 0.93
LRRC47-202ENST00000462356 CAMSAP2Q08AD1 1489 aa20.85■□□□□ 0.93
LRRC47-202ENST00000462356 ADAMTSL3P82987 1691 aa20.84■□□□□ 0.93
LRRC47-202ENST00000462356 MBD5Q9P267 1494 aa20.84■□□□□ 0.93
LRRC47-202ENST00000462356 PLPPR3Q6T4P5 718 aa20.82■□□□□ 0.92
LRRC47-202ENST00000462356 PPARGC1BQ86YN6 1023 aaKnown RBP20.82■□□□□ 0.92
LRRC47-202ENST00000462356 MADDQ8WXG6 1647 aa20.82■□□□□ 0.92
LRRC47-202ENST00000462356 MYOM3Q5VTT5 1437 aa20.81■□□□□ 0.92
LRRC47-202ENST00000462356 ATP7AQ04656 1500 aa20.79■□□□□ 0.92
LRRC47-202ENST00000462356 RIMS1Q86UR5 1692 aaKnown RBP20.77■□□□□ 0.92
LRRC47-202ENST00000462356 INO80Q9ULG1 1556 aaPredicted RBP20.77■□□□□ 0.92
LRRC47-202ENST00000462356 PTPRMP28827 1452 aa20.76■□□□□ 0.91
LRRC47-202ENST00000462356 CCDC141Q6ZP82 1450 aa20.75■□□□□ 0.91
LRRC47-202ENST00000462356 MIA2Q96PC5 1412 aa20.74■□□□□ 0.91
LRRC47-202ENST00000462356 REREQ9P2R6 1566 aa20.73■□□□□ 0.91
LRRC47-202ENST00000462356 TSPY4P0CV99 314 aa20.71■□□□□ 0.91
LRRC47-202ENST00000462356 TSPY10P0CW01 314 aa20.71■□□□□ 0.91
LRRC47-202ENST00000462356 RSPH4AQ5TD94 716 aa20.71■□□□□ 0.91
LRRC47-202ENST00000462356 FER1L4A9Z1Z3 1794 aa20.71■□□□□ 0.91
LRRC47-202ENST00000462356 PTPN23Q9H3S7 1636 aa20.71■□□□□ 0.91
LRRC47-202ENST00000462356 ARHGEF5Q12774 1597 aa20.7■□□□□ 0.9
LRRC47-202ENST00000462356 A2MP01023 1474 aa20.69■□□□□ 0.9
LRRC47-202ENST00000462356 RTEL1-TNFRSF6BF6WH68 1400 aa20.69■□□□□ 0.9
LRRC47-202ENST00000462356 FGD6Q6ZV73 1430 aa20.69■□□□□ 0.9
LRRC47-202ENST00000462356 AGLP35573 1532 aa20.68■□□□□ 0.9
LRRC47-202ENST00000462356 CEBPAP49715 358 aaPredicted RBP20.68■□□□□ 0.9
LRRC47-202ENST00000462356 ADGBQ8N7X0 1667 aa20.66■□□□□ 0.9
LRRC47-202ENST00000462356 GGT6Q6P531 493 aa20.65■□□□□ 0.9
LRRC47-202ENST00000462356 FAM50AQ14320 339 aaKnown RBP20.64■□□□□ 0.89
LRRC47-202ENST00000462356 PLXNC1O60486 1568 aa20.63■□□□□ 0.89
LRRC47-202ENST00000462356 ESF1Q9H501 851 aaKnown RBP20.63■□□□□ 0.89
LRRC47-202ENST00000462356 DHX29Q7Z478 1369 aaKnown RBP20.62■□□□□ 0.89
LRRC47-202ENST00000462356 TCOF1Q13428 1488 aaKnown RBP20.62■□□□□ 0.89
LRRC47-202ENST00000462356 ABCC5O15440 1437 aa20.61■□□□□ 0.89
LRRC47-202ENST00000462356 CHIC2Q9UKJ5 165 aa20.61■□□□□ 0.89
LRRC47-202ENST00000462356 KIF3BO15066 747 aa20.6■□□□□ 0.89
LRRC47-202ENST00000462356 DAPK1P53355 1430 aa20.59■□□□□ 0.89
LRRC47-202ENST00000462356 MAST1Q9Y2H9 1570 aa20.59■□□□□ 0.89
LRRC47-202ENST00000462356 RRP7BPQ9NSQ0 103 aa20.57■□□□□ 0.88
LRRC47-202ENST00000462356 CROCC2H7BZ55 1655 aa20.57■□□□□ 0.88
LRRC47-202ENST00000462356 DNMT1P26358 1616 aaKnown RBP20.56■□□□□ 0.88
LRRC47-202ENST00000462356 C3P01024 1663 aa20.54■□□□□ 0.88
LRRC47-202ENST00000462356 CLTCQ00610 1675 aaKnown RBP20.54■□□□□ 0.88
LRRC47-202ENST00000462356 SHANK2Q9UPX8 1470 aa20.51■□□□□ 0.87
LRRC47-202ENST00000462356 HSPA2P54652 639 aa20.51■□□□□ 0.87
LRRC47-202ENST00000462356 ZMYM3Q14202 1370 aa20.5■□□□□ 0.87
LRRC47-202ENST00000462356 KIF15Q9NS87 1388 aa20.5■□□□□ 0.87
LRRC47-202ENST00000462356 ITGAEP38570 1179 aa20.5■□□□□ 0.87
LRRC47-202ENST00000462356 CNTLNQ9NXG0 1405 aa20.5■□□□□ 0.87
LRRC47-202ENST00000462356 LMTK3Q96Q04 1460 aa20.49■□□□□ 0.87
LRRC47-202ENST00000462356 DUOX2Q9NRD8 1548 aa20.47■□□□□ 0.87
LRRC47-202ENST00000462356 PTPRKQ15262 1439 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms