RNA–Protein interactions for RNA: ENST00000462356.5

LRRC47-202, Transcript of leucine rich repeat containing 47, humanhuman

TSL 2

Gene LRRC47, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC47-202ENST00000462356 NISCHQ9Y2I1 1504 aa32.42■■■□□ 2.78
LRRC47-202ENST00000462356 CCDC180Q9P1Z9 1646 aa28.78■■■□□ 2.2
LRRC47-202ENST00000462356 ABCC9O60706 1549 aa28.4■■■□□ 2.14
LRRC47-202ENST00000462356 DCAF8L2P0C7V8 631 aa27.33■■□□□ 1.97
LRRC47-202ENST00000462356 RB1CC1Q8TDY2 1594 aa27.17■■□□□ 1.94
LRRC47-202ENST00000462356 NACADO15069 1562 aa27.09■■□□□ 1.93
LRRC47-202ENST00000462356 ZCCHC6Q5VYS8 1495 aaKnown RBP26.98■■□□□ 1.91
LRRC47-202ENST00000462356 MYO15BQ96JP2 1530 aa26.82■■□□□ 1.88
LRRC47-202ENST00000462356 DCAF1Q9Y4B6 1507 aa26.72■■□□□ 1.87
LRRC47-202ENST00000462356 UNC13AQ9UPW8 1703 aa26.62■■□□□ 1.85
LRRC47-202ENST00000462356 PABPN1Q86U42 306 aaKnown RBP eCLIP26.59■■□□□ 1.85
LRRC47-202ENST00000462356 SCRIBQ14160 1630 aa26.41■■□□□ 1.82
LRRC47-202ENST00000462356 BICRAQ9NZM4 1560 aa26.39■■□□□ 1.82
LRRC47-202ENST00000462356 DNAJC5BQ9UF47 199 aa26.18■■□□□ 1.78
LRRC47-202ENST00000462356 SHROOM4Q9ULL8 1493 aa25.91■■□□□ 1.74
LRRC47-202ENST00000462356 EIF4G1Q04637 1599 aaKnown RBP25.69■■□□□ 1.7
LRRC47-202ENST00000462356 CC2D2AQ9P2K1 1620 aa25.63■■□□□ 1.69
LRRC47-202ENST00000462356 CECR2Q9BXF3 1484 aa25.47■■□□□ 1.67
LRRC47-202ENST00000462356 SMARCA4P51532 1647 aa25.19■■□□□ 1.62
LRRC47-202ENST00000462356 BAZ1AQ9NRL2 1556 aaPredicted RBP25.11■■□□□ 1.61
LRRC47-202ENST00000462356 ATAD2BQ9ULI0 1458 aa25.07■■□□□ 1.6
LRRC47-202ENST00000462356 MROH2BQ7Z745 1585 aa25.05■■□□□ 1.6
LRRC47-202ENST00000462356 NCAPD3P42695 1498 aa25.02■■□□□ 1.6
LRRC47-202ENST00000462356 SMARCA2P51531 1590 aa24.98■■□□□ 1.59
LRRC47-202ENST00000462356 HMGXB3Q12766 1538 aa24.86■■□□□ 1.57
LRRC47-202ENST00000462356 PEG3Q9GZU2 1588 aa24.86■■□□□ 1.57
LRRC47-202ENST00000462356 BAZ1BQ9UIG0 1483 aaKnown RBP24.86■■□□□ 1.57
LRRC47-202ENST00000462356 WIZO95785 1651 aa24.8■■□□□ 1.56
LRRC47-202ENST00000462356 RSF1Q96T23 1441 aaPredicted RBP24.71■■□□□ 1.55
LRRC47-202ENST00000462356 NESP48681 1621 aa24.57■■□□□ 1.52
LRRC47-202ENST00000462356 TOP2AP11388 1531 aaKnown RBP24.45■■□□□ 1.5
LRRC47-202ENST00000462356 ERCC6Q03468 1493 aa24.44■■□□□ 1.5
LRRC47-202ENST00000462356 LAMC3Q9Y6N6 1575 aa24.36■■□□□ 1.49
LRRC47-202ENST00000462356 CADPSQ9ULU8 1353 aa24.32■■□□□ 1.48
LRRC47-202ENST00000462356 KIF21AQ7Z4S6 1674 aa24.23■■□□□ 1.47
LRRC47-202ENST00000462356 CCDC88BA6NC98 1476 aa24.22■■□□□ 1.47
LRRC47-202ENST00000462356 PDS5BQ9NTI5 1447 aa24.22■■□□□ 1.47
LRRC47-202ENST00000462356 SUPT5HO00267 1087 aaKnown RBP24.2■■□□□ 1.46
LRRC47-202ENST00000462356 CFTRP13569 1480 aa24.14■■□□□ 1.46
LRRC47-202ENST00000462356 THOC2Q8NI27 1593 aaKnown RBP24.12■■□□□ 1.45
LRRC47-202ENST00000462356 CUX2O14529 1486 aa24.11■■□□□ 1.45
LRRC47-202ENST00000462356 FANCD2Q9BXW9 1451 aa24.07■■□□□ 1.44
LRRC47-202ENST00000462356 CEP164Q9UPV0 1460 aa24.02■■□□□ 1.44
LRRC47-202ENST00000462356 MRC2Q9UBG0 1479 aa23.99■■□□□ 1.43
LRRC47-202ENST00000462356 PRDM2Q13029 1718 aa23.93■■□□□ 1.42
LRRC47-202ENST00000462356 WDR62O43379 1518 aa23.89■■□□□ 1.42
LRRC47-202ENST00000462356 URB2Q14146 1524 aaKnown RBP23.84■■□□□ 1.41
LRRC47-202ENST00000462356 TOPBP1Q92547 1522 aa23.68■■□□□ 1.38
LRRC47-202ENST00000462356 DNMBPQ6XZF7 1577 aa23.61■■□□□ 1.37
LRRC47-202ENST00000462356 ABCC8Q09428 1581 aa23.57■■□□□ 1.36
LRRC47-202ENST00000462356 DNAJC5Q9H3Z4 198 aa23.53■■□□□ 1.36
LRRC47-202ENST00000462356 IFT140Q96RY7 1462 aa23.49■■□□□ 1.35
LRRC47-202ENST00000462356 CUX1P39880 1505 aa23.49■■□□□ 1.35
LRRC47-202ENST00000462356 ZNF608Q9ULD9 1512 aaPredicted RBP23.49■■□□□ 1.35
LRRC47-202ENST00000462356 POLA1P09884 1462 aaPredicted RBP23.46■■□□□ 1.35
LRRC47-202ENST00000462356 RAD54L2Q9Y4B4 1467 aa23.44■■□□□ 1.34
LRRC47-202ENST00000462356 FGD5Q6ZNL6 1462 aa23.42■■□□□ 1.34
LRRC47-202ENST00000462356 TARBP1Q13395 1621 aaKnown RBP23.41■■□□□ 1.34
LRRC47-202ENST00000462356 SOGA1O94964 1423 aa23.4■■□□□ 1.34
LRRC47-202ENST00000462356 AQRO60306 1485 aaKnown RBP eCLIP23.36■■□□□ 1.335e-6■■□□□ 14.3
LRRC47-202ENST00000462356 EIF4G3O43432 1585 aaKnown RBP23.34■■□□□ 1.33
LRRC47-202ENST00000462356 TDRD9Q8NDG6 1382 aaKnown RBP23.31■■□□□ 1.32
LRRC47-202ENST00000462356 WRNQ14191 1432 aaPredicted RBP eCLIP23.3■■□□□ 1.32
LRRC47-202ENST00000462356 SYNJ1O43426 1573 aa23.27■■□□□ 1.32
LRRC47-202ENST00000462356 TOP2BQ02880 1626 aa23.22■■□□□ 1.31
LRRC47-202ENST00000462356 BIVM-ERCC5R4GMW8 1640 aa23.22■■□□□ 1.31
LRRC47-202ENST00000462356 OSCARQ8IYS5 282 aa23.19■■□□□ 1.3
LRRC47-202ENST00000462356 WDR97A6NE52 1622 aa23.18■■□□□ 1.3
LRRC47-202ENST00000462356 FBLN2P98095 1184 aa23.15■■□□□ 1.3
LRRC47-202ENST00000462356 ABCA10Q8WWZ4 1543 aa23.13■■□□□ 1.29
LRRC47-202ENST00000462356 GAPVD1Q14C86 1478 aa23.1■■□□□ 1.29
LRRC47-202ENST00000462356 SNAPC4Q5SXM2 1469 aa23.1■■□□□ 1.29
LRRC47-202ENST00000462356 CHD1O14646 1710 aa23.09■■□□□ 1.29
LRRC47-202ENST00000462356 GRIN2BQ13224 1484 aa23.08■■□□□ 1.29
LRRC47-202ENST00000462356 PBRM1Q86U86 1689 aa23.06■■□□□ 1.28
LRRC47-202ENST00000462356 ABCA5Q8WWZ7 1642 aa23.05■■□□□ 1.28
LRRC47-202ENST00000462356 CHMP7Q8WUX9 453 aaPredicted RBP23■■□□□ 1.27
LRRC47-202ENST00000462356 MAGI1Q96QZ7 1491 aaPredicted RBP22.98■■□□□ 1.27
LRRC47-202ENST00000462356 SYNJ2O15056 1496 aa22.92■■□□□ 1.26
LRRC47-202ENST00000462356 TRIM41Q8WV44 630 aa22.87■■□□□ 1.25
LRRC47-202ENST00000462356 ADAMTS12P58397 1594 aa22.84■■□□□ 1.25
LRRC47-202ENST00000462356 ERICH3Q5RHP9 1530 aa22.83■■□□□ 1.25
LRRC47-202ENST00000462356 RIMBP3CA6NJZ7 1639 aa22.82■■□□□ 1.24
LRRC47-202ENST00000462356 RIMBP3BA6NNM3 1639 aa22.82■■□□□ 1.24
LRRC47-202ENST00000462356 RIMBP3Q9UFD9 1639 aa22.82■■□□□ 1.24
LRRC47-202ENST00000462356 FHAD1B1AJZ9 1412 aa22.81■■□□□ 1.24
LRRC47-202ENST00000462356 ARHGEF11O15085 1522 aa22.8■■□□□ 1.24
LRRC47-202ENST00000462356 KIF27Q86VH2 1401 aa22.8■■□□□ 1.24
LRRC47-202ENST00000462356 GRIN2AQ12879 1464 aa22.79■■□□□ 1.24
LRRC47-202ENST00000462356 CLASP1Q7Z460 1538 aa22.78■■□□□ 1.24
LRRC47-202ENST00000462356 IGF1RP08069 1367 aa22.75■■□□□ 1.23
LRRC47-202ENST00000462356 CEP170Q5SW79 1584 aa22.72■■□□□ 1.23
LRRC47-202ENST00000462356 RUSC2Q8N2Y8 1516 aa22.7■■□□□ 1.22
LRRC47-202ENST00000462356 CYB5RLQ6IPT4 315 aa22.68■■□□□ 1.22
LRRC47-202ENST00000462356 NUP160Q12769 1436 aa22.67■■□□□ 1.22
LRRC47-202ENST00000462356 ARAP1Q96P48 1450 aa22.62■■□□□ 1.21
LRRC47-202ENST00000462356 CARMIL1Q5VZK9 1371 aa22.62■■□□□ 1.21
LRRC47-202ENST00000462356 CUL7Q14999 1698 aa22.62■■□□□ 1.21
LRRC47-202ENST00000462356 ERCC6L2Q5T890 1561 aa22.57■■□□□ 1.2
LRRC47-202ENST00000462356 JPH4Q96JJ6 628 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms