RNA–Protein interactions for RNA: ENST00000461768.5

SRRM1-204, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-204ENST00000461768 CDC42BPBQ9Y5S2 1711 aa13.25□□□□□ -0.29
SRRM1-204ENST00000461768 NCOA2Q15596 1464 aa13.25□□□□□ -0.29
SRRM1-204ENST00000461768 COL17A1Q9UMD9 1497 aaPredicted RBP13.25□□□□□ -0.29
SRRM1-204ENST00000461768 ARHGAP5Q13017 1502 aa13.24□□□□□ -0.29
SRRM1-204ENST00000461768 GPATCH8Q9UKJ3 1502 aaKnown RBP13.24□□□□□ -0.29
SRRM1-204ENST00000461768 AKNAQ7Z591 1439 aa13.22□□□□□ -0.29
SRRM1-204ENST00000461768 CCNB3Q8WWL7 1395 aa13.22□□□□□ -0.29
SRRM1-204ENST00000461768 EFCAB2Q5VUJ9 269 aa13.22□□□□□ -0.29
SRRM1-204ENST00000461768 ITSN2Q9NZM3 1697 aa13.21□□□□□ -0.29
SRRM1-204ENST00000461768 ADGRL1O94910 1474 aa13.2□□□□□ -0.3
SRRM1-204ENST00000461768 CFDP1Q9UEE9 299 aaPredicted RBP13.18□□□□□ -0.3
SRRM1-204ENST00000461768 FRMPD1Q5SYB0 1578 aa13.18□□□□□ -0.3
SRRM1-204ENST00000461768 SAMD9LQ8IVG5 1584 aa13.18□□□□□ -0.3
SRRM1-204ENST00000461768 ABCC1P33527 1531 aa13.18□□□□□ -0.3
SRRM1-204ENST00000461768 DENND4BO75064 1496 aaPredicted RBP13.17□□□□□ -0.3
SRRM1-204ENST00000461768 RICTORQ6R327 1708 aa13.17□□□□□ -0.3
SRRM1-204ENST00000461768 SCAPERQ9BY12 1400 aa13.16□□□□□ -0.3
SRRM1-204ENST00000461768 MYOM3Q5VTT5 1437 aa13.15□□□□□ -0.3
SRRM1-204ENST00000461768 POGZQ7Z3K3 1410 aa13.15□□□□□ -0.3
SRRM1-204ENST00000461768 RAPGEF3O95398 923 aa13.15□□□□□ -0.3
SRRM1-204ENST00000461768 ARHGEF12Q9NZN5 1544 aa13.14□□□□□ -0.31
SRRM1-204ENST00000461768 ZNF777Q9ULD5 760 aaPredicted RBP13.14□□□□□ -0.31
SRRM1-204ENST00000461768 PLEKHH2Q8IVE3 1493 aa13.14□□□□□ -0.31
SRRM1-204ENST00000461768 MIA2Q96PC5 1412 aa13.13□□□□□ -0.31
SRRM1-204ENST00000461768 KIAA1107Q9UPP5 1409 aa13.13□□□□□ -0.31
SRRM1-204ENST00000461768 ZMYM4Q5VZL5 1548 aa13.13□□□□□ -0.31
SRRM1-204ENST00000461768 SYCP2Q9BX26 1530 aa13.13□□□□□ -0.31
SRRM1-204ENST00000461768 ZNF518AQ6AHZ1 1483 aa13.12□□□□□ -0.31
SRRM1-204ENST00000461768 ZNF644Q9H582 1327 aaPredicted RBP13.12□□□□□ -0.31
SRRM1-204ENST00000461768 KDM5CP41229 1560 aa13.11□□□□□ -0.31
SRRM1-204ENST00000461768 CAMSAP2Q08AD1 1489 aa13.11□□□□□ -0.31
SRRM1-204ENST00000461768 TRAPPC8Q9Y2L5 1435 aa13.11□□□□□ -0.31
SRRM1-204ENST00000461768 MBD5Q9P267 1494 aa13.1□□□□□ -0.31
SRRM1-204ENST00000461768 FGD6Q6ZV73 1430 aa13.09□□□□□ -0.31
SRRM1-204ENST00000461768 MAGI2Q86UL8 1455 aa13.09□□□□□ -0.31
SRRM1-204ENST00000461768 HNRNPMP52272 730 aaKnown RBP eCLIP13.08□□□□□ -0.321e-9■■■■■ 32.3
SRRM1-204ENST00000461768 PPARGC1BQ86YN6 1023 aaKnown RBP13.08□□□□□ -0.32
SRRM1-204ENST00000461768 AFAP1Q8N556 730 aa13.08□□□□□ -0.32
SRRM1-204ENST00000461768 PTPN23Q9H3S7 1636 aa13.08□□□□□ -0.32
SRRM1-204ENST00000461768 ARHGEF40Q8TER5 1519 aa13.08□□□□□ -0.32
SRRM1-204ENST00000461768 ZFYVE16Q7Z3T8 1539 aa13.07□□□□□ -0.32
SRRM1-204ENST00000461768 ARHGEF5Q12774 1597 aa13.07□□□□□ -0.32
SRRM1-204ENST00000461768 HECW2Q9P2P5 1572 aa13.07□□□□□ -0.32
SRRM1-204ENST00000461768 TCOF1Q13428 1488 aaKnown RBP13.06□□□□□ -0.32
SRRM1-204ENST00000461768 MLH3Q9UHC1 1453 aa13.06□□□□□ -0.32
SRRM1-204ENST00000461768 CCDC141Q6ZP82 1450 aa13.05□□□□□ -0.32
SRRM1-204ENST00000461768 YEATS2Q9ULM3 1422 aa13.05□□□□□ -0.32
SRRM1-204ENST00000461768 INO80Q9ULG1 1556 aaPredicted RBP13.04□□□□□ -0.32
SRRM1-204ENST00000461768 KIDINS220Q9ULH0 1771 aa13.04□□□□□ -0.32
SRRM1-204ENST00000461768 RSPH4AQ5TD94 716 aa13.03□□□□□ -0.32
SRRM1-204ENST00000461768 ATP7AQ04656 1500 aa13.03□□□□□ -0.32
SRRM1-204ENST00000461768 SPAG9O60271 1321 aaKnown RBP13.02□□□□□ -0.33
SRRM1-204ENST00000461768 DIP2CQ9Y2E4 1556 aa13.02□□□□□ -0.33
SRRM1-204ENST00000461768 ABCA6Q8N139 1617 aa13.02□□□□□ -0.33
SRRM1-204ENST00000461768 DNMT1P26358 1616 aaKnown RBP13□□□□□ -0.33
SRRM1-204ENST00000461768 ATP10AO60312 1499 aa13□□□□□ -0.33
SRRM1-204ENST00000461768 RTEL1-TNFRSF6BF6WH68 1400 aa13□□□□□ -0.33
SRRM1-204ENST00000461768 CROCC2H7BZ55 1655 aa12.99□□□□□ -0.33
SRRM1-204ENST00000461768 REREQ9P2R6 1566 aa12.99□□□□□ -0.33
SRRM1-204ENST00000461768 MAST1Q9Y2H9 1570 aa12.99□□□□□ -0.33
SRRM1-204ENST00000461768 ABCC5O15440 1437 aa12.99□□□□□ -0.33
SRRM1-204ENST00000461768 C9orf84Q5VXU9 1444 aa12.99□□□□□ -0.33
SRRM1-204ENST00000461768 SIGLEC1Q9BZZ2 1709 aa12.99□□□□□ -0.33
SRRM1-204ENST00000461768 SHANK2Q9UPX8 1470 aa12.98□□□□□ -0.33
SRRM1-204ENST00000461768 DAPK1P53355 1430 aa12.98□□□□□ -0.33
SRRM1-204ENST00000461768 RRBP1Q9P2E9 1410 aaKnown RBP12.98□□□□□ -0.33
SRRM1-204ENST00000461768 MYT1LQ9UL68 1186 aa12.98□□□□□ -0.33
SRRM1-204ENST00000461768 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.97□□□□□ -0.33
SRRM1-204ENST00000461768 TSPY4P0CV99 314 aa12.97□□□□□ -0.33
SRRM1-204ENST00000461768 TSPY10P0CW01 314 aa12.97□□□□□ -0.33
SRRM1-204ENST00000461768 FAM50AQ14320 339 aaKnown RBP12.97□□□□□ -0.33
SRRM1-204ENST00000461768 ADGBQ8N7X0 1667 aa12.96□□□□□ -0.33
SRRM1-204ENST00000461768 PLXNC1O60486 1568 aa12.94□□□□□ -0.34
SRRM1-204ENST00000461768 AGLP35573 1532 aa12.93□□□□□ -0.34
SRRM1-204ENST00000461768 A2MP01023 1474 aa12.93□□□□□ -0.34
SRRM1-204ENST00000461768 BCORL1Q5H9F3 1711 aa12.93□□□□□ -0.34
SRRM1-204ENST00000461768 ARID4BQ4LE39 1312 aaPredicted RBP12.91□□□□□ -0.34
SRRM1-204ENST00000461768 PTPRKQ15262 1439 aa12.91□□□□□ -0.34
SRRM1-204ENST00000461768 DHX29Q7Z478 1369 aaKnown RBP12.91□□□□□ -0.34
SRRM1-204ENST00000461768 ADGRL2O95490 1459 aa12.91□□□□□ -0.34
SRRM1-204ENST00000461768 ADAMTSL3P82987 1691 aa12.9□□□□□ -0.34
SRRM1-204ENST00000461768 NCOA1Q15788 1441 aa12.89□□□□□ -0.35
SRRM1-204ENST00000461768 KDM4FA0A1W2PPD8 638 aa12.89□□□□□ -0.35
SRRM1-204ENST00000461768 DUOX2Q9NRD8 1548 aa12.88□□□□□ -0.35
SRRM1-204ENST00000461768 CHIC2Q9UKJ5 165 aa12.88□□□□□ -0.35
SRRM1-204ENST00000461768 ANKRD30AQ9BXX3 1397 aa12.88□□□□□ -0.35
SRRM1-204ENST00000461768 KIF15Q9NS87 1388 aa12.88□□□□□ -0.35
SRRM1-204ENST00000461768 ROCK1Q13464 1354 aa12.87□□□□□ -0.35
SRRM1-204ENST00000461768 MADDQ8WXG6 1647 aa12.87□□□□□ -0.35
SRRM1-204ENST00000461768 RRP7BPQ9NSQ0 103 aa12.86□□□□□ -0.35
SRRM1-204ENST00000461768 EIF2AK4Q9P2K8 1649 aaKnown RBP12.86□□□□□ -0.35
SRRM1-204ENST00000461768 ITGAEP38570 1179 aa12.85□□□□□ -0.35
SRRM1-204ENST00000461768 MLECQ14165 292 aa12.85□□□□□ -0.35
SRRM1-204ENST00000461768 ERBINQ96RT1 1412 aa12.85□□□□□ -0.35
SRRM1-204ENST00000461768 FER1L4A9Z1Z3 1794 aa12.84□□□□□ -0.35
SRRM1-204ENST00000461768 RNF17Q9BXT8 1623 aaKnown RBP12.84□□□□□ -0.35
SRRM1-204ENST00000461768 RIMS1Q86UR5 1692 aaKnown RBP12.83□□□□□ -0.36
SRRM1-204ENST00000461768 KIF3BO15066 747 aa12.82□□□□□ -0.36
SRRM1-204ENST00000461768 MROH1Q8NDA8 1641 aa12.8□□□□□ -0.36
SRRM1-204ENST00000461768 ANKRD50Q9ULJ7 1429 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms