RNA–Protein interactions for RNA: ENST00000461120.1

CHRD-209, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 683 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-209ENST00000461120 MTUS2Q5JR59 1369 aa21.63■■□□□ 1.05
CHRD-209ENST00000461120 RIMS1Q86UR5 1692 aaKnown RBP21.62■■□□□ 1.05
CHRD-209ENST00000461120 KIF14Q15058 1648 aa21.62■■□□□ 1.05
CHRD-209ENST00000461120 ABCA9Q8IUA7 1624 aa21.62■■□□□ 1.05
CHRD-209ENST00000461120 EHBP1L1Q8N3D4 1523 aa21.61■■□□□ 1.05
CHRD-209ENST00000461120 ARAP3Q8WWN8 1544 aa21.6■■□□□ 1.05
CHRD-209ENST00000461120 LRRC9Q6ZRR7 1453 aa21.6■■□□□ 1.05
CHRD-209ENST00000461120 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.6■■□□□ 1.05
CHRD-209ENST00000461120 KANK4Q5T7N3 995 aaPredicted RBP21.58■■□□□ 1.05
CHRD-209ENST00000461120 DMRT2Q9Y5R5 561 aa21.58■■□□□ 1.05
CHRD-209ENST00000461120 TTC37Q6PGP7 1564 aa21.57■■□□□ 1.04
CHRD-209ENST00000461120 PLPPR3Q6T4P5 718 aa21.53■■□□□ 1.04
CHRD-209ENST00000461120 SUPT6HQ7KZ85 1726 aaKnown RBP21.51■■□□□ 1.03
CHRD-209ENST00000461120 PHLDB1Q86UU1 1377 aa21.5■■□□□ 1.03
CHRD-209ENST00000461120 NCOA2Q15596 1464 aa21.49■■□□□ 1.03
CHRD-209ENST00000461120 MYO5CQ9NQX4 1742 aa21.48■■□□□ 1.03
CHRD-209ENST00000461120 PLCH2O75038 1416 aa21.47■■□□□ 1.03
CHRD-209ENST00000461120 CCNB3Q8WWL7 1395 aa21.45■■□□□ 1.02
CHRD-209ENST00000461120 CDC42BPAQ5VT25 1732 aa21.44■■□□□ 1.02
CHRD-209ENST00000461120 GPATCH8Q9UKJ3 1502 aaKnown RBP21.44■■□□□ 1.02
CHRD-209ENST00000461120 PREX2Q70Z35 1606 aa21.44■■□□□ 1.02
CHRD-209ENST00000461120 POGZQ7Z3K3 1410 aa21.42■■□□□ 1.02
CHRD-209ENST00000461120 YEATS2Q9ULM3 1422 aa21.42■■□□□ 1.02
CHRD-209ENST00000461120 CDC42BPBQ9Y5S2 1711 aa21.41■■□□□ 1.02
CHRD-209ENST00000461120 FANCAO15360 1455 aa21.41■■□□□ 1.02
CHRD-209ENST00000461120 ARHGAP5Q13017 1502 aa21.4■■□□□ 1.02
CHRD-209ENST00000461120 NEO1Q92859 1461 aa21.4■■□□□ 1.02
CHRD-209ENST00000461120 PPARGC1BQ86YN6 1023 aaKnown RBP21.4■■□□□ 1.02
CHRD-209ENST00000461120 RAPGEF3O95398 923 aa21.39■■□□□ 1.01
CHRD-209ENST00000461120 EFCAB2Q5VUJ9 269 aa21.39■■□□□ 1.01
CHRD-209ENST00000461120 PREX1Q8TCU6 1659 aa21.39■■□□□ 1.01
CHRD-209ENST00000461120 ITSN2Q9NZM3 1697 aa21.38■■□□□ 1.01
CHRD-209ENST00000461120 CFAP74Q9C0B2 1584 aa21.38■■□□□ 1.01
CHRD-209ENST00000461120 IQSEC2Q5JU85 1478 aa21.38■■□□□ 1.01
CHRD-209ENST00000461120 CFDP1Q9UEE9 299 aaPredicted RBP21.36■■□□□ 1.01
CHRD-209ENST00000461120 AKNAQ7Z591 1439 aa21.36■■□□□ 1.01
CHRD-209ENST00000461120 STRCQ7RTU9 1775 aa21.36■■□□□ 1.01
CHRD-209ENST00000461120 MYOM3Q5VTT5 1437 aa21.35■■□□□ 1.01
CHRD-209ENST00000461120 FER1L4A9Z1Z3 1794 aa21.33■■□□□ 1
CHRD-209ENST00000461120 ZNF777Q9ULD5 760 aaPredicted RBP21.31■■□□□ 1
CHRD-209ENST00000461120 SAMD9LQ8IVG5 1584 aa21.31■■□□□ 1
CHRD-209ENST00000461120 MIA2Q96PC5 1412 aa21.29■■□□□ 1
CHRD-209ENST00000461120 ARHGEF40Q8TER5 1519 aa21.29■■□□□ 1
CHRD-209ENST00000461120 SETD1BQ9UPS6 1966 aaKnown RBP21.28■■□□□ 1
CHRD-209ENST00000461120 ABCC1P33527 1531 aa21.28■■□□□ 1
CHRD-209ENST00000461120 SCAPERQ9BY12 1400 aa21.28■■□□□ 1
CHRD-209ENST00000461120 ZNF644Q9H582 1327 aaPredicted RBP21.27■□□□□ 0.99
CHRD-209ENST00000461120 FGD6Q6ZV73 1430 aa21.26■□□□□ 0.99
CHRD-209ENST00000461120 DENND4BO75064 1496 aaPredicted RBP21.26■□□□□ 0.99
CHRD-209ENST00000461120 PLEKHH2Q8IVE3 1493 aa21.26■□□□□ 0.99
CHRD-209ENST00000461120 PTPRTO14522 1441 aa21.25■□□□□ 0.99
CHRD-209ENST00000461120 CAMSAP2Q08AD1 1489 aa21.25■□□□□ 0.99
CHRD-209ENST00000461120 ARHGEF12Q9NZN5 1544 aa21.24■□□□□ 0.99
CHRD-209ENST00000461120 FRMPD1Q5SYB0 1578 aa21.24■□□□□ 0.99
CHRD-209ENST00000461120 KIAA1107Q9UPP5 1409 aa21.24■□□□□ 0.99
CHRD-209ENST00000461120 SYCP2Q9BX26 1530 aa21.23■□□□□ 0.99
CHRD-209ENST00000461120 PTPN23Q9H3S7 1636 aa21.22■□□□□ 0.99
CHRD-209ENST00000461120 RICTORQ6R327 1708 aa21.21■□□□□ 0.99
CHRD-209ENST00000461120 TCOF1Q13428 1488 aaKnown RBP21.2■□□□□ 0.98
CHRD-209ENST00000461120 LTBP4Q8N2S1 1624 aa21.2■□□□□ 0.98
CHRD-209ENST00000461120 UBAP1LF5GYI3 381 aa21.2■□□□□ 0.98
CHRD-209ENST00000461120 HNRNPMP52272 730 aaKnown RBP eCLIP21.2■□□□□ 0.98
CHRD-209ENST00000461120 MLECQ14165 292 aa21.2■□□□□ 0.98
CHRD-209ENST00000461120 TRAPPC8Q9Y2L5 1435 aa21.2■□□□□ 0.98
CHRD-209ENST00000461120 UHRF1BP1Q6BDS2 1440 aa21.19■□□□□ 0.98
CHRD-209ENST00000461120 MBD5Q9P267 1494 aa21.19■□□□□ 0.98
CHRD-209ENST00000461120 ZNF518AQ6AHZ1 1483 aa21.18■□□□□ 0.98
CHRD-209ENST00000461120 MED1Q15648 1581 aaPredicted RBP21.18■□□□□ 0.98
CHRD-209ENST00000461120 PHF23Q9BUL5 403 aaPredicted RBP21.17■□□□□ 0.98
CHRD-209ENST00000461120 AFAP1Q8N556 730 aa21.16■□□□□ 0.98
CHRD-209ENST00000461120 KDM5CP41229 1560 aa21.14■□□□□ 0.98
CHRD-209ENST00000461120 ARHGEF5Q12774 1597 aa21.14■□□□□ 0.98
CHRD-209ENST00000461120 ZMYM4Q5VZL5 1548 aa21.14■□□□□ 0.98
CHRD-209ENST00000461120 CCDC141Q6ZP82 1450 aa21.13■□□□□ 0.97
CHRD-209ENST00000461120 RRBP1Q9P2E9 1410 aaKnown RBP21.12■□□□□ 0.97
CHRD-209ENST00000461120 FAM50AQ14320 339 aaKnown RBP21.12■□□□□ 0.97
CHRD-209ENST00000461120 RSPH4AQ5TD94 716 aa21.12■□□□□ 0.97
CHRD-209ENST00000461120 ZFYVE16Q7Z3T8 1539 aa21.09■□□□□ 0.97
CHRD-209ENST00000461120 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.09■□□□□ 0.97
CHRD-209ENST00000461120 MAGI2Q86UL8 1455 aa21.08■□□□□ 0.97
CHRD-209ENST00000461120 MLH3Q9UHC1 1453 aa21.08■□□□□ 0.97
CHRD-209ENST00000461120 DNMT1P26358 1616 aaKnown RBP21.08■□□□□ 0.97
CHRD-209ENST00000461120 SPAG9O60271 1321 aaKnown RBP21.07■□□□□ 0.96
CHRD-209ENST00000461120 ABCC5O15440 1437 aa21.07■□□□□ 0.96
CHRD-209ENST00000461120 DAPK1P53355 1430 aa21.06■□□□□ 0.96
CHRD-209ENST00000461120 SIGLEC1Q9BZZ2 1709 aa21.06■□□□□ 0.96
CHRD-209ENST00000461120 CEBPAP49715 358 aaPredicted RBP21.05■□□□□ 0.96
CHRD-209ENST00000461120 INO80Q9ULG1 1556 aaPredicted RBP21.05■□□□□ 0.96
CHRD-209ENST00000461120 TSPY4P0CV99 314 aa21.04■□□□□ 0.96
CHRD-209ENST00000461120 TSPY10P0CW01 314 aa21.04■□□□□ 0.96
CHRD-209ENST00000461120 MYT1LQ9UL68 1186 aa21.04■□□□□ 0.96
CHRD-209ENST00000461120 CROCC2H7BZ55 1655 aa21.04■□□□□ 0.96
CHRD-209ENST00000461120 KIDINS220Q9ULH0 1771 aa21.04■□□□□ 0.96
CHRD-209ENST00000461120 ATP7AQ04656 1500 aa21.04■□□□□ 0.96
CHRD-209ENST00000461120 RTEL1-TNFRSF6BF6WH68 1400 aa21.03■□□□□ 0.96
CHRD-209ENST00000461120 MAST1Q9Y2H9 1570 aa21.02■□□□□ 0.96
CHRD-209ENST00000461120 SHANK2Q9UPX8 1470 aa21.02■□□□□ 0.96
CHRD-209ENST00000461120 C9orf84Q5VXU9 1444 aa21.02■□□□□ 0.96
CHRD-209ENST00000461120 SCAF1Q9H7N4 1312 aaKnown RBP21.01■□□□□ 0.95
CHRD-209ENST00000461120 ABCA6Q8N139 1617 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms