RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 KANK4Q5T7N3 995 aaPredicted RBP16.95■□□□□ 0.3
SMNDC1-203ENST00000460483 CD109Q6YHK3 1445 aa16.95■□□□□ 0.3
SMNDC1-203ENST00000460483 PHLDB1Q86UU1 1377 aa16.93■□□□□ 0.3
SMNDC1-203ENST00000460483 EFCAB2Q5VUJ9 269 aa16.93■□□□□ 0.3
SMNDC1-203ENST00000460483 TEX14Q8IWB6 1497 aa16.92■□□□□ 0.3
SMNDC1-203ENST00000460483 CFDP1Q9UEE9 299 aaPredicted RBP16.91■□□□□ 0.3
SMNDC1-203ENST00000460483 DIP2BQ9P265 1576 aa16.9■□□□□ 0.3
SMNDC1-203ENST00000460483 PLCH2O75038 1416 aa16.89■□□□□ 0.29
SMNDC1-203ENST00000460483 NCOA2Q15596 1464 aa16.89■□□□□ 0.29
SMNDC1-203ENST00000460483 SUPT6HQ7KZ85 1726 aaKnown RBP16.88■□□□□ 0.29
SMNDC1-203ENST00000460483 MAGI3Q5TCQ9 1506 aa16.88■□□□□ 0.29
SMNDC1-203ENST00000460483 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.87■□□□□ 0.29
SMNDC1-203ENST00000460483 ABCA9Q8IUA7 1624 aa16.87■□□□□ 0.29
SMNDC1-203ENST00000460483 LRRIQ1Q96JM4 1722 aa16.87■□□□□ 0.29
SMNDC1-203ENST00000460483 ARAP3Q8WWN8 1544 aa16.86■□□□□ 0.29
SMNDC1-203ENST00000460483 KCNA4P22459 653 aa16.86■□□□□ 0.29
SMNDC1-203ENST00000460483 MIA2Q96PC5 1412 aa16.85■□□□□ 0.29
SMNDC1-203ENST00000460483 RSPH4AQ5TD94 716 aa16.84■□□□□ 0.29
SMNDC1-203ENST00000460483 MYOM3Q5VTT5 1437 aa16.83■□□□□ 0.28
SMNDC1-203ENST00000460483 NEO1Q92859 1461 aa16.83■□□□□ 0.28
SMNDC1-203ENST00000460483 GPATCH8Q9UKJ3 1502 aaKnown RBP16.83■□□□□ 0.28
SMNDC1-203ENST00000460483 ARHGAP5Q13017 1502 aa16.82■□□□□ 0.28
SMNDC1-203ENST00000460483 PLEKHH2Q8IVE3 1493 aa16.82■□□□□ 0.28
SMNDC1-203ENST00000460483 FANCAO15360 1455 aa16.81■□□□□ 0.28
SMNDC1-203ENST00000460483 PPARGC1BQ86YN6 1023 aaKnown RBP16.81■□□□□ 0.28
SMNDC1-203ENST00000460483 ZNF777Q9ULD5 760 aaPredicted RBP16.81■□□□□ 0.28
SMNDC1-203ENST00000460483 MAP3K4Q9Y6R4 1608 aa16.8■□□□□ 0.28
SMNDC1-203ENST00000460483 CFAP74Q9C0B2 1584 aa16.79■□□□□ 0.28
SMNDC1-203ENST00000460483 TTC37Q6PGP7 1564 aa16.78■□□□□ 0.28
SMNDC1-203ENST00000460483 U3KPZ7 1027 aaPredicted RBP16.78■□□□□ 0.28
SMNDC1-203ENST00000460483 ITSN2Q9NZM3 1697 aa16.77■□□□□ 0.28
SMNDC1-203ENST00000460483 AKNAQ7Z591 1439 aa16.77■□□□□ 0.27
SMNDC1-203ENST00000460483 KIAA1107Q9UPP5 1409 aa16.76■□□□□ 0.27
SMNDC1-203ENST00000460483 FGD6Q6ZV73 1430 aa16.75■□□□□ 0.27
SMNDC1-203ENST00000460483 MYO5CQ9NQX4 1742 aa16.75■□□□□ 0.27
SMNDC1-203ENST00000460483 TSPY4P0CV99 314 aa16.74■□□□□ 0.27
SMNDC1-203ENST00000460483 TSPY10P0CW01 314 aa16.74■□□□□ 0.27
SMNDC1-203ENST00000460483 FAM50AQ14320 339 aaKnown RBP16.74■□□□□ 0.27
SMNDC1-203ENST00000460483 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.74■□□□□ 0.27
SMNDC1-203ENST00000460483 PREX2Q70Z35 1606 aa16.74■□□□□ 0.27
SMNDC1-203ENST00000460483 ADGRL1O94910 1474 aa16.73■□□□□ 0.27
SMNDC1-203ENST00000460483 KIF13AQ9H1H9 1805 aa16.72■□□□□ 0.27
SMNDC1-203ENST00000460483 SCAPERQ9BY12 1400 aa16.71■□□□□ 0.27
SMNDC1-203ENST00000460483 DENND4BO75064 1496 aaPredicted RBP16.71■□□□□ 0.27
SMNDC1-203ENST00000460483 MYT1LQ9UL68 1186 aa16.69■□□□□ 0.26
SMNDC1-203ENST00000460483 RRBP1Q9P2E9 1410 aaKnown RBP16.68■□□□□ 0.26
SMNDC1-203ENST00000460483 ZNF518AQ6AHZ1 1483 aa16.67■□□□□ 0.26
SMNDC1-203ENST00000460483 HNRNPMP52272 730 aaKnown RBP eCLIP16.67■□□□□ 0.26
SMNDC1-203ENST00000460483 CDC42BPAQ5VT25 1732 aa16.67■□□□□ 0.26
SMNDC1-203ENST00000460483 CAMSAP2Q08AD1 1489 aa16.67■□□□□ 0.26
SMNDC1-203ENST00000460483 TCOF1Q13428 1488 aaKnown RBP16.67■□□□□ 0.26
SMNDC1-203ENST00000460483 ZNF644Q9H582 1327 aaPredicted RBP16.66■□□□□ 0.26
SMNDC1-203ENST00000460483 CAPN15O75808 1086 aa16.65■□□□□ 0.26
SMNDC1-203ENST00000460483 SPAG9O60271 1321 aaKnown RBP16.65■□□□□ 0.26
SMNDC1-203ENST00000460483 ABCC1P33527 1531 aa16.64■□□□□ 0.25
SMNDC1-203ENST00000460483 PTPN23Q9H3S7 1636 aa16.63■□□□□ 0.25
SMNDC1-203ENST00000460483 POGZQ7Z3K3 1410 aa16.63■□□□□ 0.25
SMNDC1-203ENST00000460483 CCDC141Q6ZP82 1450 aa16.63■□□□□ 0.25
SMNDC1-203ENST00000460483 CDC42BPBQ9Y5S2 1711 aa16.63■□□□□ 0.25
SMNDC1-203ENST00000460483 RAPGEF3O95398 923 aa16.63■□□□□ 0.25
SMNDC1-203ENST00000460483 MAGI2Q86UL8 1455 aa16.62■□□□□ 0.25
SMNDC1-203ENST00000460483 AFAP1Q8N556 730 aa16.62■□□□□ 0.25
SMNDC1-203ENST00000460483 TSPOAP1O95153 1857 aa16.62■□□□□ 0.25
SMNDC1-203ENST00000460483 SAMD9LQ8IVG5 1584 aa16.61■□□□□ 0.25
SMNDC1-203ENST00000460483 MBD5Q9P267 1494 aa16.61■□□□□ 0.25
SMNDC1-203ENST00000460483 TRIM26Q12899 539 aaPredicted RBP16.6■□□□□ 0.25
SMNDC1-203ENST00000460483 SPINK5Q9NQ38 1064 aaPredicted RBP16.6■□□□□ 0.25
SMNDC1-203ENST00000460483 RTEL1-TNFRSF6BF6WH68 1400 aa16.6■□□□□ 0.25
SMNDC1-203ENST00000460483 SYCP2Q9BX26 1530 aa16.6■□□□□ 0.25
SMNDC1-203ENST00000460483 ARHGEF5Q12774 1597 aa16.6■□□□□ 0.25
SMNDC1-203ENST00000460483 KDM6BO15054 1643 aa16.59■□□□□ 0.25
SMNDC1-203ENST00000460483 PPRC1Q5VV67 1664 aaKnown RBP16.59■□□□□ 0.25
SMNDC1-203ENST00000460483 ACIN1Q9UKV3 1341 aaKnown RBP16.58■□□□□ 0.24
SMNDC1-203ENST00000460483 TRAPPC8Q9Y2L5 1435 aa16.58■□□□□ 0.24
SMNDC1-203ENST00000460483 MLH3Q9UHC1 1453 aa16.57■□□□□ 0.24
SMNDC1-203ENST00000460483 SHANK2Q9UPX8 1470 aa16.57■□□□□ 0.24
SMNDC1-203ENST00000460483 DAPK1P53355 1430 aa16.57■□□□□ 0.24
SMNDC1-203ENST00000460483 ANKRD30AQ9BXX3 1397 aa16.57■□□□□ 0.24
SMNDC1-203ENST00000460483 ITGAEP38570 1179 aa16.57■□□□□ 0.24
SMNDC1-203ENST00000460483 ARHGEF12Q9NZN5 1544 aa16.55■□□□□ 0.24
SMNDC1-203ENST00000460483 ABCC5O15440 1437 aa16.55■□□□□ 0.24
SMNDC1-203ENST00000460483 C9orf84Q5VXU9 1444 aa16.54■□□□□ 0.24
SMNDC1-203ENST00000460483 ROCK1Q13464 1354 aa16.53■□□□□ 0.24
SMNDC1-203ENST00000460483 ZMYM4Q5VZL5 1548 aa16.53■□□□□ 0.24
SMNDC1-203ENST00000460483 COL17A1Q9UMD9 1497 aaPredicted RBP16.53■□□□□ 0.24
SMNDC1-203ENST00000460483 KDM5CP41229 1560 aa16.52■□□□□ 0.24
SMNDC1-203ENST00000460483 DNMT1P26358 1616 aaKnown RBP16.52■□□□□ 0.23
SMNDC1-203ENST00000460483 SLC4A2P04920 1241 aa16.51■□□□□ 0.23
SMNDC1-203ENST00000460483 CHIC2Q9UKJ5 165 aa16.51■□□□□ 0.23
SMNDC1-203ENST00000460483 ZFYVE16Q7Z3T8 1539 aa16.49■□□□□ 0.23
SMNDC1-203ENST00000460483 HECW2Q9P2P5 1572 aa16.48■□□□□ 0.23
SMNDC1-203ENST00000460483 MAST1Q9Y2H9 1570 aa16.48■□□□□ 0.23
SMNDC1-203ENST00000460483 DSG3P32926 999 aa16.48■□□□□ 0.23
SMNDC1-203ENST00000460483 RRP7BPQ9NSQ0 103 aa16.48■□□□□ 0.23
SMNDC1-203ENST00000460483 ATP7AQ04656 1500 aa16.48■□□□□ 0.23
SMNDC1-203ENST00000460483 ATP10AO60312 1499 aa16.48■□□□□ 0.23
SMNDC1-203ENST00000460483 NCOA1Q15788 1441 aa16.47■□□□□ 0.23
SMNDC1-203ENST00000460483 KIF15Q9NS87 1388 aa16.47■□□□□ 0.23
SMNDC1-203ENST00000460483 ADGRL2O95490 1459 aa16.47■□□□□ 0.23
SMNDC1-203ENST00000460483 RICTORQ6R327 1708 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms