RNA–Protein interactions for RNA: ENST00000460469.1

NMD3-202, Transcript of NMD3 ribosome export adaptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NMD3, Length 3,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3-202ENST00000460469 ANP32EQ9BTT0 268 aa24.06■■□□□ 1.44
NMD3-202ENST00000460469 MRS2Q9HD23 443 aa24.05■■□□□ 1.44
NMD3-202ENST00000460469 TCOF1Q13428 1488 aaKnown RBP24.03■■□□□ 1.44
NMD3-202ENST00000460469 PRKRIP1Q9H875 184 aaPredicted RBP24.02■■□□□ 1.44
NMD3-202ENST00000460469 HECW1Q76N89 1606 aa24.02■■□□□ 1.44
NMD3-202ENST00000460469 ABCC5O15440 1437 aa23.99■■□□□ 1.43
NMD3-202ENST00000460469 DAPK1P53355 1430 aa23.98■■□□□ 1.43
NMD3-202ENST00000460469 CCDC7Q96M83 1385 aa23.98■■□□□ 1.43
NMD3-202ENST00000460469 ANKRD30BQ9BXX2 1392 aa23.98■■□□□ 1.43
NMD3-202ENST00000460469 PRG4Q92954 1404 aaPredicted RBP23.98■■□□□ 1.43
NMD3-202ENST00000460469 KIF7Q2M1P5 1343 aa23.98■■□□□ 1.43
NMD3-202ENST00000460469 WDR62O43379 1518 aa23.97■■□□□ 1.43
NMD3-202ENST00000460469 PBRM1Q86U86 1689 aa23.97■■□□□ 1.43
NMD3-202ENST00000460469 CFDP1Q9UEE9 299 aaPredicted RBP23.97■■□□□ 1.43
NMD3-202ENST00000460469 CNTLNQ9NXG0 1405 aa23.95■■□□□ 1.42
NMD3-202ENST00000460469 MIA2Q96PC5 1412 aa23.95■■□□□ 1.42
NMD3-202ENST00000460469 ADAMTS12P58397 1594 aa23.94■■□□□ 1.42
NMD3-202ENST00000460469 GCC2Q8IWJ2 1684 aa23.93■■□□□ 1.42
NMD3-202ENST00000460469 NUP153P49790 1475 aaKnown RBP23.92■■□□□ 1.42
NMD3-202ENST00000460469 B4GALNT3Q6L9W6 998 aa23.92■■□□□ 1.42
NMD3-202ENST00000460469 DISP1Q96F81 1524 aa23.9■■□□□ 1.42
NMD3-202ENST00000460469 MSH5O43196 834 aa23.9■■□□□ 1.42
NMD3-202ENST00000460469 NCOA1Q15788 1441 aa23.9■■□□□ 1.42
NMD3-202ENST00000460469 PKD2Q13563 968 aa23.89■■□□□ 1.41
NMD3-202ENST00000460469 CHMP7Q8WUX9 453 aaPredicted RBP23.89■■□□□ 1.41
NMD3-202ENST00000460469 RPRD2Q5VT52 1461 aaKnown RBP23.87■■□□□ 1.41
NMD3-202ENST00000460469 PLB1Q6P1J6 1458 aa23.87■■□□□ 1.41
NMD3-202ENST00000460469 KDM2AQ9Y2K7 1162 aa23.87■■□□□ 1.41
NMD3-202ENST00000460469 CDK11AQ9UQ88 783 aaPredicted RBP23.87■■□□□ 1.41
NMD3-202ENST00000460469 MRC2Q9UBG0 1479 aa23.86■■□□□ 1.41
NMD3-202ENST00000460469 AKNAQ7Z591 1439 aa23.85■■□□□ 1.41
NMD3-202ENST00000460469 TEX14Q8IWB6 1497 aa23.85■■□□□ 1.41
NMD3-202ENST00000460469 KIAA0586Q9BVV6 1533 aa23.8■■□□□ 1.4
NMD3-202ENST00000460469 KIAA0556O60303 1618 aa23.79■■□□□ 1.4
NMD3-202ENST00000460469 ROCK1Q13464 1354 aa23.79■■□□□ 1.4
NMD3-202ENST00000460469 SPATA31E1Q6ZUB1 1445 aa23.78■■□□□ 1.4
NMD3-202ENST00000460469 PZPP20742 1482 aa23.77■■□□□ 1.4
NMD3-202ENST00000460469 DNMT1P26358 1616 aaKnown RBP23.75■■□□□ 1.39
NMD3-202ENST00000460469 CAMSAP2Q08AD1 1489 aa23.75■■□□□ 1.39
NMD3-202ENST00000460469 GRIN2AQ12879 1464 aa23.74■■□□□ 1.39
NMD3-202ENST00000460469 USP47Q96K76 1375 aa23.74■■□□□ 1.39
NMD3-202ENST00000460469 JPH4Q96JJ6 628 aa23.74■■□□□ 1.39
NMD3-202ENST00000460469 HNRNPMP52272 730 aaKnown RBP eCLIP23.73■■□□□ 1.39
NMD3-202ENST00000460469 ZBED9Q6R2W3 1325 aa23.72■■□□□ 1.39
NMD3-202ENST00000460469 PPP4R2Q9NY27 417 aa23.72■■□□□ 1.39
NMD3-202ENST00000460469 RAPGEF6Q8TEU7 1601 aa23.72■■□□□ 1.39
NMD3-202ENST00000460469 SALL2Q9Y467 1007 aaPredicted RBP23.72■■□□□ 1.39
NMD3-202ENST00000460469 GPATCH8Q9UKJ3 1502 aaKnown RBP23.72■■□□□ 1.39
NMD3-202ENST00000460469 KIF14Q15058 1648 aa23.71■■□□□ 1.39
NMD3-202ENST00000460469 IFT140Q96RY7 1462 aa23.71■■□□□ 1.39
NMD3-202ENST00000460469 TROQ12816 1431 aaPredicted RBP23.71■■□□□ 1.39
NMD3-202ENST00000460469 NUP155O75694 1391 aa23.7■■□□□ 1.38
NMD3-202ENST00000460469 CARD11Q9BXL7 1154 aa23.69■■□□□ 1.38
NMD3-202ENST00000460469 DCAF11Q8TEB1 546 aa23.68■■□□□ 1.38
NMD3-202ENST00000460469 DHX29Q7Z478 1369 aaKnown RBP23.66■■□□□ 1.38
NMD3-202ENST00000460469 ST20-MTHFSA0A0A6YYL1 179 aa23.66■■□□□ 1.38
NMD3-202ENST00000460469 PLEKHD1A6NEE1 506 aa23.66■■□□□ 1.38
NMD3-202ENST00000460469 RGL3Q3MIN7 710 aa23.65■■□□□ 1.38
NMD3-202ENST00000460469 EIF4G3O43432 1585 aaKnown RBP23.64■■□□□ 1.38
NMD3-202ENST00000460469 ANKRD50Q9ULJ7 1429 aa23.64■■□□□ 1.38
NMD3-202ENST00000460469 KIAA1107Q9UPP5 1409 aa23.64■■□□□ 1.38
NMD3-202ENST00000460469 ERCC6Q03468 1493 aa23.63■■□□□ 1.37
NMD3-202ENST00000460469 BCORL1Q5H9F3 1711 aa23.62■■□□□ 1.37
NMD3-202ENST00000460469 ANKRD30AQ9BXX3 1397 aa23.62■■□□□ 1.37
NMD3-202ENST00000460469 TMC1Q8TDI8 760 aa23.61■■□□□ 1.37
NMD3-202ENST00000460469 CEP170Q5SW79 1584 aa23.6■■□□□ 1.37
NMD3-202ENST00000460469 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.6■■□□□ 1.371e-7■■■□□ 19.2
NMD3-202ENST00000460469 TSPY4P0CV99 314 aa23.59■■□□□ 1.37
NMD3-202ENST00000460469 TSPY10P0CW01 314 aa23.59■■□□□ 1.37
NMD3-202ENST00000460469 ERICH6Q7L0X2 663 aa23.54■■□□□ 1.36
NMD3-202ENST00000460469 PNISRQ8TF01 805 aaKnown RBP23.54■■□□□ 1.36
NMD3-202ENST00000460469 MBD5Q9P267 1494 aa23.53■■□□□ 1.36
NMD3-202ENST00000460469 NBPF1Q3BBV0 1214 aa23.52■■□□□ 1.36
NMD3-202ENST00000460469 C9orf84Q5VXU9 1444 aa23.52■■□□□ 1.36
NMD3-202ENST00000460469 NUDCQ9Y266 331 aa23.51■■□□□ 1.35
NMD3-202ENST00000460469 FANCIQ9NVI1 1328 aa23.5■■□□□ 1.35
NMD3-202ENST00000460469 CARMIL2Q6F5E8 1435 aa23.5■■□□□ 1.35
NMD3-202ENST00000460469 ATP10BO94823 1461 aa23.49■■□□□ 1.35
NMD3-202ENST00000460469 KIF15Q9NS87 1388 aa23.49■■□□□ 1.35
NMD3-202ENST00000460469 CCDC136Q96JN2 1154 aa23.48■■□□□ 1.35
NMD3-202ENST00000460469 SYNJ2O15056 1496 aa23.48■■□□□ 1.35
NMD3-202ENST00000460469 ERICH6BQ5W0A0 696 aa23.46■■□□□ 1.35
NMD3-202ENST00000460469 ROCK2O75116 1388 aaKnown RBP23.45■■□□□ 1.34
NMD3-202ENST00000460469 MAGI1Q96QZ7 1491 aaPredicted RBP23.44■■□□□ 1.34
NMD3-202ENST00000460469 ADGRL2O95490 1459 aa23.44■■□□□ 1.34
NMD3-202ENST00000460469 KDM5CP41229 1560 aa23.44■■□□□ 1.34
NMD3-202ENST00000460469 CC2D1BQ5T0F9 858 aaKnown RBP23.43■■□□□ 1.34
NMD3-202ENST00000460469 SMG6Q86US8 1419 aaKnown RBP23.42■■□□□ 1.34
NMD3-202ENST00000460469 ITSN2Q9NZM3 1697 aa23.41■■□□□ 1.34
NMD3-202ENST00000460469 PAK3O75914 559 aaPredicted RBP23.39■■□□□ 1.34
NMD3-202ENST00000460469 ADGBQ8N7X0 1667 aa23.39■■□□□ 1.34
NMD3-202ENST00000460469 ABCC10Q5T3U5 1492 aa23.39■■□□□ 1.33
NMD3-202ENST00000460469 CDCA7LQ96GN5 454 aa23.38■■□□□ 1.33
NMD3-202ENST00000460469 BCL11AQ9H165 835 aa23.38■■□□□ 1.33
NMD3-202ENST00000460469 CDC42BPAQ5VT25 1732 aa23.37■■□□□ 1.33
NMD3-202ENST00000460469 NBR1Q14596 966 aa23.36■■□□□ 1.33
NMD3-202ENST00000460469 RALGAPBQ86X10 1494 aa23.35■■□□□ 1.33
NMD3-202ENST00000460469 NUP160Q12769 1436 aa23.35■■□□□ 1.33
NMD3-202ENST00000460469 POLR1AO95602 1720 aaPredicted RBP23.35■■□□□ 1.33
NMD3-202ENST00000460469 CROCC2H7BZ55 1655 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms