RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 IRX6P78412 446 aaPredicted RBP21.22■□□□□ 0.99
LMNB1-203ENST00000460265 ABCA5Q8WWZ7 1642 aa21.21■□□□□ 0.99
LMNB1-203ENST00000460265 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.21■□□□□ 0.999e-7■■■■□ 23.3
LMNB1-203ENST00000460265 CFAP43Q8NDM7 1665 aa21.19■□□□□ 0.98
LMNB1-203ENST00000460265 EHBP1L1Q8N3D4 1523 aa21.19■□□□□ 0.98
LMNB1-203ENST00000460265 SUPT6HQ7KZ85 1726 aaKnown RBP21.18■□□□□ 0.98
LMNB1-203ENST00000460265 MRS2Q9HD23 443 aa21.17■□□□□ 0.98
LMNB1-203ENST00000460265 KIAA0586Q9BVV6 1533 aa21.15■□□□□ 0.98
LMNB1-203ENST00000460265 PLB1Q6P1J6 1458 aa21.15■□□□□ 0.98
LMNB1-203ENST00000460265 TARBP1Q13395 1621 aaKnown RBP21.13■□□□□ 0.97
LMNB1-203ENST00000460265 PTPN23Q9H3S7 1636 aa21.13■□□□□ 0.97
LMNB1-203ENST00000460265 THOC2Q8NI27 1593 aaKnown RBP21.13■□□□□ 0.97
LMNB1-203ENST00000460265 NUP155O75694 1391 aa21.11■□□□□ 0.97
LMNB1-203ENST00000460265 HECW1Q76N89 1606 aa21.11■□□□□ 0.97
LMNB1-203ENST00000460265 GRIN2AQ12879 1464 aa21.11■□□□□ 0.97
LMNB1-203ENST00000460265 MAGI3Q5TCQ9 1506 aa21.1■□□□□ 0.97
LMNB1-203ENST00000460265 MSH5O43196 834 aa21.1■□□□□ 0.97
LMNB1-203ENST00000460265 DCAF11Q8TEB1 546 aa21.09■□□□□ 0.97
LMNB1-203ENST00000460265 NBPF8Q3BBV2 869 aa21.08■□□□□ 0.97
LMNB1-203ENST00000460265 ANO8Q9HCE9 1232 aaPredicted RBP21.08■□□□□ 0.96
LMNB1-203ENST00000460265 CCER2I3L3R5 266 aa21.07■□□□□ 0.96
LMNB1-203ENST00000460265 CARD11Q9BXL7 1154 aa21.07■□□□□ 0.96
LMNB1-203ENST00000460265 WASHC2AQ641Q2 1341 aa21.07■□□□□ 0.96
LMNB1-203ENST00000460265 PTPRGP23470 1445 aa21.07■□□□□ 0.96
LMNB1-203ENST00000460265 SAMD9Q5K651 1589 aa21.06■□□□□ 0.96
LMNB1-203ENST00000460265 ANKRD30AQ9BXX3 1397 aa21.05■□□□□ 0.96
LMNB1-203ENST00000460265 SALL2Q9Y467 1007 aaPredicted RBP21.05■□□□□ 0.96
LMNB1-203ENST00000460265 ADAMTS12P58397 1594 aa21.05■□□□□ 0.96
LMNB1-203ENST00000460265 UGGT2Q9NYU1 1516 aa21.04■□□□□ 0.96
LMNB1-203ENST00000460265 MIA2Q96PC5 1412 aa21.04■□□□□ 0.96
LMNB1-203ENST00000460265 DEKP35659 375 aaKnown RBP21.03■□□□□ 0.96
LMNB1-203ENST00000460265 DAPK1P53355 1430 aa21.03■□□□□ 0.96
LMNB1-203ENST00000460265 PBRM1Q86U86 1689 aa21.01■□□□□ 0.95
LMNB1-203ENST00000460265 ABCC5O15440 1437 aa21.01■□□□□ 0.95
LMNB1-203ENST00000460265 C11orf95C9JLR9 678 aaPredicted RBP21.01■□□□□ 0.95
LMNB1-203ENST00000460265 TROQ12816 1431 aaPredicted RBP21■□□□□ 0.95
LMNB1-203ENST00000460265 NUP153P49790 1475 aaKnown RBP21■□□□□ 0.95
LMNB1-203ENST00000460265 SYNJ2O15056 1496 aa20.97■□□□□ 0.95
LMNB1-203ENST00000460265 DISP1Q96F81 1524 aa20.97■□□□□ 0.95
LMNB1-203ENST00000460265 CCDC184Q52MB2 194 aa20.96■□□□□ 0.95
LMNB1-203ENST00000460265 TMC1Q8TDI8 760 aa20.94■□□□□ 0.94
LMNB1-203ENST00000460265 WDR62O43379 1518 aa20.93■□□□□ 0.94
LMNB1-203ENST00000460265 EIF4G3O43432 1585 aaKnown RBP20.93■□□□□ 0.94
LMNB1-203ENST00000460265 ANKRD50Q9ULJ7 1429 aa20.92■□□□□ 0.94
LMNB1-203ENST00000460265 MAGI1Q96QZ7 1491 aaPredicted RBP20.91■□□□□ 0.94
LMNB1-203ENST00000460265 SENP3Q9H4L4 574 aaPredicted RBP20.9■□□□□ 0.94
LMNB1-203ENST00000460265 PRKRIP1Q9H875 184 aaPredicted RBP20.89■□□□□ 0.93
LMNB1-203ENST00000460265 ARHGEF11O15085 1522 aa20.89■□□□□ 0.93
LMNB1-203ENST00000460265 ANKRD30BQ9BXX2 1392 aa20.89■□□□□ 0.93
LMNB1-203ENST00000460265 KIAA0556O60303 1618 aa20.89■□□□□ 0.93
LMNB1-203ENST00000460265 KIF7Q2M1P5 1343 aa20.88■□□□□ 0.93
LMNB1-203ENST00000460265 ST20-MTHFSA0A0A6YYL1 179 aa20.88■□□□□ 0.93
LMNB1-203ENST00000460265 LRRIQ1Q96JM4 1722 aa20.87■□□□□ 0.93
LMNB1-203ENST00000460265 CHGAP10645 457 aaKnown RBP20.87■□□□□ 0.93
LMNB1-203ENST00000460265 KIF15Q9NS87 1388 aa20.87■□□□□ 0.93
LMNB1-203ENST00000460265 CAMSAP2Q08AD1 1489 aa20.86■□□□□ 0.93
LMNB1-203ENST00000460265 KDM6BO15054 1643 aa20.85■□□□□ 0.93
LMNB1-203ENST00000460265 NCOA1Q15788 1441 aa20.85■□□□□ 0.93
LMNB1-203ENST00000460265 RAPGEF6Q8TEU7 1601 aa20.85■□□□□ 0.93
LMNB1-203ENST00000460265 FANCIQ9NVI1 1328 aa20.85■□□□□ 0.93
LMNB1-203ENST00000460265 GPATCH8Q9UKJ3 1502 aaKnown RBP20.85■□□□□ 0.93
LMNB1-203ENST00000460265 CCDC7Q96M83 1385 aa20.85■□□□□ 0.93
LMNB1-203ENST00000460265 TCOF1Q13428 1488 aaKnown RBP20.83■□□□□ 0.93
LMNB1-203ENST00000460265 ROCK1Q13464 1354 aa20.83■□□□□ 0.92
LMNB1-203ENST00000460265 NBR1Q14596 966 aa20.82■□□□□ 0.92
LMNB1-203ENST00000460265 AKNAQ7Z591 1439 aa20.82■□□□□ 0.92
LMNB1-203ENST00000460265 USP47Q96K76 1375 aa20.81■□□□□ 0.92
LMNB1-203ENST00000460265 CCDC136Q96JN2 1154 aa20.8■□□□□ 0.92
LMNB1-203ENST00000460265 C9orf84Q5VXU9 1444 aa20.8■□□□□ 0.92
LMNB1-203ENST00000460265 EFCAB2Q5VUJ9 269 aa20.8■□□□□ 0.92
LMNB1-203ENST00000460265 ATP10BO94823 1461 aa20.79■□□□□ 0.92
LMNB1-203ENST00000460265 NPM1P06748 294 aaKnown RBP eCLIP20.79■□□□□ 0.92
LMNB1-203ENST00000460265 CEP170Q5SW79 1584 aa20.77■□□□□ 0.92
LMNB1-203ENST00000460265 ROCK2O75116 1388 aaKnown RBP20.77■□□□□ 0.92
LMNB1-203ENST00000460265 CC2D1BQ5T0F9 858 aaKnown RBP20.77■□□□□ 0.91
LMNB1-203ENST00000460265 AFAP1Q8N556 730 aa20.77■□□□□ 0.91
LMNB1-203ENST00000460265 KIAA1107Q9UPP5 1409 aa20.75■□□□□ 0.91
LMNB1-203ENST00000460265 NBPF1Q3BBV0 1214 aa20.73■□□□□ 0.91
LMNB1-203ENST00000460265 RSPH4AQ5TD94 716 aa20.73■□□□□ 0.91
LMNB1-203ENST00000460265 RPRD2Q5VT52 1461 aaKnown RBP20.72■□□□□ 0.91
LMNB1-203ENST00000460265 CNTLNQ9NXG0 1405 aa20.72■□□□□ 0.91
LMNB1-203ENST00000460265 B4GALNT3Q6L9W6 998 aa20.71■□□□□ 0.91
LMNB1-203ENST00000460265 KIF14Q15058 1648 aa20.7■□□□□ 0.9
LMNB1-203ENST00000460265 KIF3BO15066 747 aa20.69■□□□□ 0.9
LMNB1-203ENST00000460265 SPAG9O60271 1321 aaKnown RBP20.69■□□□□ 0.9
LMNB1-203ENST00000460265 NUP160Q12769 1436 aa20.69■□□□□ 0.9
LMNB1-203ENST00000460265 RTN4Q9NQC3 1192 aaKnown RBP20.68■□□□□ 0.9
LMNB1-203ENST00000460265 CCDC144AA2RUR9 1427 aa20.68■□□□□ 0.9
LMNB1-203ENST00000460265 ARHGAP5Q13017 1502 aa20.67■□□□□ 0.9
LMNB1-203ENST00000460265 DENND4BO75064 1496 aaPredicted RBP20.67■□□□□ 0.9
LMNB1-203ENST00000460265 RTL5Q5HYW3 569 aaPredicted RBP20.64■□□□□ 0.9
LMNB1-203ENST00000460265 ERICH6BQ5W0A0 696 aa20.64■□□□□ 0.9
LMNB1-203ENST00000460265 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.64■□□□□ 0.89
LMNB1-203ENST00000460265 GGT6Q6P531 493 aa20.62■□□□□ 0.89
LMNB1-203ENST00000460265 DNMT1P26358 1616 aaKnown RBP20.62■□□□□ 0.89
LMNB1-203ENST00000460265 PZPP20742 1482 aa20.61■□□□□ 0.89
LMNB1-203ENST00000460265 NOP58Q9Y2X3 529 aaKnown RBP20.57■□□□□ 0.88
LMNB1-203ENST00000460265 TMF1P82094 1093 aa20.57■□□□□ 0.88
LMNB1-203ENST00000460265 GCC2Q8IWJ2 1684 aa20.56■□□□□ 0.88
LMNB1-203ENST00000460265 PANK3Q9H999 370 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms