RNA–Protein interactions for RNA: ENST00000460215.5

SCMH1-212, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 3

Gene SCMH1, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-212ENST00000460215 MAGI2Q86UL8 1455 aa14.86□□□□□ -0.03
SCMH1-212ENST00000460215 CFAP74Q9C0B2 1584 aa14.85□□□□□ -0.03
SCMH1-212ENST00000460215 P3H3Q8IVL6 736 aa14.85□□□□□ -0.03
SCMH1-212ENST00000460215 HECW1Q76N89 1606 aa14.82□□□□□ -0.04
SCMH1-212ENST00000460215 RAPGEF6Q8TEU7 1601 aa14.81□□□□□ -0.04
SCMH1-212ENST00000460215 UBAP1LF5GYI3 381 aa14.79□□□□□ -0.04
SCMH1-212ENST00000460215 ATP10AO60312 1499 aa14.79□□□□□ -0.04
SCMH1-212ENST00000460215 C9orf84Q5VXU9 1444 aa14.79□□□□□ -0.04
SCMH1-212ENST00000460215 NUP153P49790 1475 aaKnown RBP14.77□□□□□ -0.04
SCMH1-212ENST00000460215 MED1Q15648 1581 aaPredicted RBP14.76□□□□□ -0.05
SCMH1-212ENST00000460215 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.76□□□□□ -0.05
SCMH1-212ENST00000460215 PLEKHD1A6NEE1 506 aa14.75□□□□□ -0.05
SCMH1-212ENST00000460215 NCOA1Q15788 1441 aa14.75□□□□□ -0.05
SCMH1-212ENST00000460215 SCAPERQ9BY12 1400 aa14.75□□□□□ -0.05
SCMH1-212ENST00000460215 SETD1BQ9UPS6 1966 aaKnown RBP14.74□□□□□ -0.05
SCMH1-212ENST00000460215 PRXQ9BXM0 1461 aa14.73□□□□□ -0.05
SCMH1-212ENST00000460215 SAMD9Q5K651 1589 aa14.72□□□□□ -0.05
SCMH1-212ENST00000460215 ZNF335Q9H4Z2 1342 aaPredicted RBP14.7□□□□□ -0.06
SCMH1-212ENST00000460215 C3P01024 1663 aa14.68□□□□□ -0.06
SCMH1-212ENST00000460215 TRAPPC8Q9Y2L5 1435 aa14.68□□□□□ -0.06
SCMH1-212ENST00000460215 HSPA1LP34931 641 aa14.67□□□□□ -0.06
SCMH1-212ENST00000460215 PHF23Q9BUL5 403 aaPredicted RBP14.67□□□□□ -0.06
SCMH1-212ENST00000460215 CAMSAP1Q5T5Y3 1602 aa14.66□□□□□ -0.06
SCMH1-212ENST00000460215 PLCH2O75038 1416 aa14.66□□□□□ -0.06
SCMH1-212ENST00000460215 SCAF1Q9H7N4 1312 aaKnown RBP14.66□□□□□ -0.06
SCMH1-212ENST00000460215 ESF1Q9H501 851 aaKnown RBP14.65□□□□□ -0.06
SCMH1-212ENST00000460215 ZNF518AQ6AHZ1 1483 aa14.63□□□□□ -0.07
SCMH1-212ENST00000460215 NCKAP5LQ9HCH0 1330 aa14.63□□□□□ -0.07
SCMH1-212ENST00000460215 MYT1LQ9UL68 1186 aa14.62□□□□□ -0.07
SCMH1-212ENST00000460215 DIP2CQ9Y2E4 1556 aa14.61□□□□□ -0.07
SCMH1-212ENST00000460215 PIP4K2BP78356 416 aa14.61□□□□□ -0.07
SCMH1-212ENST00000460215 EFCAB2Q5VUJ9 269 aa14.61□□□□□ -0.07
SCMH1-212ENST00000460215 KDM5CP41229 1560 aa14.6□□□□□ -0.07
SCMH1-212ENST00000460215 REREQ9P2R6 1566 aa14.6□□□□□ -0.07
SCMH1-212ENST00000460215 CNTLNQ9NXG0 1405 aa14.58□□□□□ -0.07
SCMH1-212ENST00000460215 AGLP35573 1532 aa14.58□□□□□ -0.08
SCMH1-212ENST00000460215 RANGAP1P46060 587 aaPredicted RBP14.58□□□□□ -0.08
SCMH1-212ENST00000460215 AFAP1Q8N556 730 aa14.58□□□□□ -0.08
SCMH1-212ENST00000460215 NPATQ14207 1427 aa14.58□□□□□ -0.08
SCMH1-212ENST00000460215 CDK13Q14004 1512 aaKnown RBP14.57□□□□□ -0.08
SCMH1-212ENST00000460215 ABCA6Q8N139 1617 aa14.56□□□□□ -0.08
SCMH1-212ENST00000460215 PLA2R1Q13018 1463 aa14.56□□□□□ -0.08
SCMH1-212ENST00000460215 MYO5CQ9NQX4 1742 aa14.55□□□□□ -0.08
SCMH1-212ENST00000460215 PKD2Q13563 968 aa14.55□□□□□ -0.08
SCMH1-212ENST00000460215 TOM1O60784 492 aa14.54□□□□□ -0.08
SCMH1-212ENST00000460215 PPP6R1Q9UPN7 881 aa14.54□□□□□ -0.08
SCMH1-212ENST00000460215 TCOF1Q13428 1488 aaKnown RBP14.53□□□□□ -0.08
SCMH1-212ENST00000460215 ARHGAP5Q13017 1502 aa14.52□□□□□ -0.08
SCMH1-212ENST00000460215 MLH3Q9UHC1 1453 aa14.52□□□□□ -0.08
SCMH1-212ENST00000460215 ZNF142P52746 1687 aaPredicted RBP14.5□□□□□ -0.09
SCMH1-212ENST00000460215 MYO3AQ8NEV4 1616 aa14.5□□□□□ -0.09
SCMH1-212ENST00000460215 MROH2AA6NES4 1674 aa14.49□□□□□ -0.09
SCMH1-212ENST00000460215 CEP170BQ9Y4F5 1589 aaPredicted RBP14.49□□□□□ -0.09
SCMH1-212ENST00000460215 ZMYM3Q14202 1370 aa14.48□□□□□ -0.09
SCMH1-212ENST00000460215 CPS1P31327 1500 aa14.48□□□□□ -0.09
SCMH1-212ENST00000460215 KIF14Q15058 1648 aa14.47□□□□□ -0.09
SCMH1-212ENST00000460215 SUPT6HQ7KZ85 1726 aaKnown RBP14.46□□□□□ -0.09
SCMH1-212ENST00000460215 PTPRKQ15262 1439 aa14.45□□□□□ -0.1
SCMH1-212ENST00000460215 SENP3Q9H4L4 574 aaPredicted RBP14.45□□□□□ -0.1
SCMH1-212ENST00000460215 SHANK2Q9UPX8 1470 aa14.44□□□□□ -0.1
SCMH1-212ENST00000460215 CDK11AQ9UQ88 783 aaPredicted RBP14.43□□□□□ -0.1
SCMH1-212ENST00000460215 ABCC1P33527 1531 aa14.42□□□□□ -0.1
SCMH1-212ENST00000460215 CSRNP3Q8WYN3 585 aa14.42□□□□□ -0.1
SCMH1-212ENST00000460215 RGS17Q9UGC6 210 aaPredicted RBP14.42□□□□□ -0.1
SCMH1-212ENST00000460215 ATP1B4Q9UN42 357 aaPredicted RBP14.42□□□□□ -0.1
SCMH1-212ENST00000460215 ALKQ9UM73 1620 aa14.41□□□□□ -0.1
SCMH1-212ENST00000460215 KIDINS220Q9ULH0 1771 aa14.41□□□□□ -0.1
SCMH1-212ENST00000460215 TROQ12816 1431 aaPredicted RBP14.41□□□□□ -0.1
SCMH1-212ENST00000460215 CLIP1P30622 1438 aa14.4□□□□□ -0.1
SCMH1-212ENST00000460215 CLTCQ00610 1675 aaKnown RBP14.39□□□□□ -0.11
SCMH1-212ENST00000460215 ITSN2Q9NZM3 1697 aa14.39□□□□□ -0.11
SCMH1-212ENST00000460215 A2ML1A8K2U0 1454 aa14.38□□□□□ -0.11
SCMH1-212ENST00000460215 NEURL4Q96JN8 1562 aa14.38□□□□□ -0.11
SCMH1-212ENST00000460215 CDC42BPBQ9Y5S2 1711 aa14.37□□□□□ -0.11
SCMH1-212ENST00000460215 DNMT1P26358 1616 aaKnown RBP14.36□□□□□ -0.11
SCMH1-212ENST00000460215 POLR1AO95602 1720 aaPredicted RBP14.35□□□□□ -0.11
SCMH1-212ENST00000460215 VWDEQ8N2E2 1590 aa14.35□□□□□ -0.11
SCMH1-212ENST00000460215 PREX2Q70Z35 1606 aa14.35□□□□□ -0.11
SCMH1-212ENST00000460215 FMN1Q68DA7 1419 aa14.33□□□□□ -0.11
SCMH1-212ENST00000460215 SAMD9LQ8IVG5 1584 aa14.33□□□□□ -0.12
SCMH1-212ENST00000460215 POTEAQ6S8J7 498 aa14.32□□□□□ -0.12
SCMH1-212ENST00000460215 RNF17Q9BXT8 1623 aaKnown RBP14.31□□□□□ -0.12
SCMH1-212ENST00000460215 GGT6Q6P531 493 aa14.31□□□□□ -0.12
SCMH1-212ENST00000460215 SPAG9O60271 1321 aaKnown RBP14.31□□□□□ -0.12
SCMH1-212ENST00000460215 PLXNC1O60486 1568 aa14.3□□□□□ -0.12
SCMH1-212ENST00000460215 ANKLE2Q86XL3 938 aa14.29□□□□□ -0.12
SCMH1-212ENST00000460215 A2MP01023 1474 aa14.29□□□□□ -0.12
SCMH1-212ENST00000460215 NPHP4O75161 1426 aaPredicted RBP14.28□□□□□ -0.12
SCMH1-212ENST00000460215 ATP7AQ04656 1500 aa14.28□□□□□ -0.12
SCMH1-212ENST00000460215 TNRQ92752 1358 aa14.28□□□□□ -0.12
SCMH1-212ENST00000460215 LRRC7Q96NW7 1537 aa14.28□□□□□ -0.12
SCMH1-212ENST00000460215 SYCP2Q9BX26 1530 aa14.27□□□□□ -0.12
SCMH1-212ENST00000460215 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.27□□□□□ -0.12
SCMH1-212ENST00000460215 SETD1AO15047 1707 aaKnown RBP14.27□□□□□ -0.13
SCMH1-212ENST00000460215 ZNF777Q9ULD5 760 aaPredicted RBP14.26□□□□□ -0.13
SCMH1-212ENST00000460215 SYNMO15061 1565 aa14.26□□□□□ -0.13
SCMH1-212ENST00000460215 MED14O60244 1454 aa14.25□□□□□ -0.13
SCMH1-212ENST00000460215 EEA1Q15075 1411 aa14.24□□□□□ -0.13
SCMH1-212ENST00000460215 INO80Q9ULG1 1556 aaPredicted RBP14.24□□□□□ -0.13
SCMH1-212ENST00000460215 DEPDC5O75140 1603 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms