RNA–Protein interactions for RNA: ENST00000459809.5

PHF1-206, Transcript of PHD finger protein 1, humanhuman

TSL 4

Gene PHF1, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-206ENST00000459809 AFAP1Q8N556 730 aa20.93■□□□□ 0.94
PHF1-206ENST00000459809 CEP162Q5TB80 1403 aa20.93■□□□□ 0.94
PHF1-206ENST00000459809 LRRIQ1Q96JM4 1722 aa20.92■□□□□ 0.94
PHF1-206ENST00000459809 MYO5CQ9NQX4 1742 aa20.92■□□□□ 0.94
PHF1-206ENST00000459809 ZFYVE16Q7Z3T8 1539 aa20.9■□□□□ 0.94
PHF1-206ENST00000459809 ARHGEF40Q8TER5 1519 aa20.9■□□□□ 0.94
PHF1-206ENST00000459809 ZNF518AQ6AHZ1 1483 aa20.9■□□□□ 0.94
PHF1-206ENST00000459809 YEATS2Q9ULM3 1422 aa20.9■□□□□ 0.94
PHF1-206ENST00000459809 LOC105371045A0A1W2PR82 267 aa20.9■□□□□ 0.94
PHF1-206ENST00000459809 ATP10AO60312 1499 aa20.88■□□□□ 0.93
PHF1-206ENST00000459809 MTUS2Q5JR59 1369 aa20.87■□□□□ 0.93
PHF1-206ENST00000459809 MYT1LQ9UL68 1186 aa20.87■□□□□ 0.93
PHF1-206ENST00000459809 PTPRMP28827 1452 aa20.87■□□□□ 0.93
PHF1-206ENST00000459809 ADAMTSL3P82987 1691 aa20.86■□□□□ 0.93
PHF1-206ENST00000459809 CFDP1Q9UEE9 299 aaPredicted RBP20.85■□□□□ 0.93
PHF1-206ENST00000459809 ZNF777Q9ULD5 760 aaPredicted RBP20.84■□□□□ 0.93
PHF1-206ENST00000459809 CCNB3Q8WWL7 1395 aa20.84■□□□□ 0.93
PHF1-206ENST00000459809 GPATCH8Q9UKJ3 1502 aaKnown RBP20.83■□□□□ 0.93
PHF1-206ENST00000459809 BCORL1Q5H9F3 1711 aa20.83■□□□□ 0.92
PHF1-206ENST00000459809 C9orf84Q5VXU9 1444 aa20.82■□□□□ 0.92
PHF1-206ENST00000459809 MLH3Q9UHC1 1453 aa20.81■□□□□ 0.92
PHF1-206ENST00000459809 CDC42BPBQ9Y5S2 1711 aa20.81■□□□□ 0.92
PHF1-206ENST00000459809 PREX2Q70Z35 1606 aa20.8■□□□□ 0.92
PHF1-206ENST00000459809 MLECQ14165 292 aa20.8■□□□□ 0.92
PHF1-206ENST00000459809 KDM5CP41229 1560 aa20.8■□□□□ 0.92
PHF1-206ENST00000459809 TRAPPC8Q9Y2L5 1435 aa20.79■□□□□ 0.92
PHF1-206ENST00000459809 ARHGEF12Q9NZN5 1544 aa20.78■□□□□ 0.92
PHF1-206ENST00000459809 KIAA1107Q9UPP5 1409 aa20.78■□□□□ 0.92
PHF1-206ENST00000459809 HNRNPMP52272 730 aaKnown RBP eCLIP20.77■□□□□ 0.92
PHF1-206ENST00000459809 ABCC1P33527 1531 aa20.77■□□□□ 0.92
PHF1-206ENST00000459809 PLEKHH2Q8IVE3 1493 aa20.75■□□□□ 0.91
PHF1-206ENST00000459809 HECW2Q9P2P5 1572 aa20.75■□□□□ 0.91
PHF1-206ENST00000459809 MADDQ8WXG6 1647 aa20.74■□□□□ 0.91
PHF1-206ENST00000459809 SPAG9O60271 1321 aaKnown RBP20.74■□□□□ 0.91
PHF1-206ENST00000459809 CDC42BPAQ5VT25 1732 aa20.73■□□□□ 0.91
PHF1-206ENST00000459809 VPS8Q8N3P4 1428 aa20.72■□□□□ 0.91
PHF1-206ENST00000459809 EHBP1L1Q8N3D4 1523 aa20.71■□□□□ 0.91
PHF1-206ENST00000459809 REREQ9P2R6 1566 aa20.69■□□□□ 0.9
PHF1-206ENST00000459809 RSPH4AQ5TD94 716 aa20.68■□□□□ 0.9
PHF1-206ENST00000459809 SAMD9LQ8IVG5 1584 aa20.68■□□□□ 0.9
PHF1-206ENST00000459809 ESF1Q9H501 851 aaKnown RBP20.67■□□□□ 0.9
PHF1-206ENST00000459809 ZNF644Q9H582 1327 aaPredicted RBP20.67■□□□□ 0.9
PHF1-206ENST00000459809 AGLP35573 1532 aa20.67■□□□□ 0.9
PHF1-206ENST00000459809 DIP2CQ9Y2E4 1556 aa20.67■□□□□ 0.9
PHF1-206ENST00000459809 ITSN2Q9NZM3 1697 aa20.67■□□□□ 0.9
PHF1-206ENST00000459809 SIGLEC1Q9BZZ2 1709 aa20.67■□□□□ 0.9
PHF1-206ENST00000459809 PLPPR3Q6T4P5 718 aa20.66■□□□□ 0.9
PHF1-206ENST00000459809 SYCP2Q9BX26 1530 aa20.65■□□□□ 0.9
PHF1-206ENST00000459809 RIMS1Q86UR5 1692 aaKnown RBP20.64■□□□□ 0.9
PHF1-206ENST00000459809 NCOA2Q15596 1464 aa20.62■□□□□ 0.89
PHF1-206ENST00000459809 TIAM1Q13009 1591 aa20.62■□□□□ 0.89
PHF1-206ENST00000459809 MAP3K1Q13233 1512 aa20.62■□□□□ 0.89
PHF1-206ENST00000459809 ABCA6Q8N139 1617 aa20.61■□□□□ 0.89
PHF1-206ENST00000459809 CEBPAP49715 358 aaPredicted RBP20.61■□□□□ 0.89
PHF1-206ENST00000459809 MBD5Q9P267 1494 aa20.61■□□□□ 0.89
PHF1-206ENST00000459809 KIDINS220Q9ULH0 1771 aa20.6■□□□□ 0.89
PHF1-206ENST00000459809 APLP2Q06481 763 aa20.6■□□□□ 0.89
PHF1-206ENST00000459809 LRRC9Q6ZRR7 1453 aa20.6■□□□□ 0.89
PHF1-206ENST00000459809 LMTK3Q96Q04 1460 aa20.6■□□□□ 0.89
PHF1-206ENST00000459809 KANK4Q5T7N3 995 aaPredicted RBP20.59■□□□□ 0.89
PHF1-206ENST00000459809 RTEL1-TNFRSF6BF6WH68 1400 aa20.59■□□□□ 0.89
PHF1-206ENST00000459809 PPP6R1Q9UPN7 881 aa20.58■□□□□ 0.89
PHF1-206ENST00000459809 CNTLNQ9NXG0 1405 aa20.57■□□□□ 0.88
PHF1-206ENST00000459809 SUPT6HQ7KZ85 1726 aaKnown RBP20.56■□□□□ 0.88
PHF1-206ENST00000459809 TSPY4P0CV99 314 aa20.56■□□□□ 0.88
PHF1-206ENST00000459809 TSPY10P0CW01 314 aa20.56■□□□□ 0.88
PHF1-206ENST00000459809 ATP7AQ04656 1500 aa20.56■□□□□ 0.88
PHF1-206ENST00000459809 FER1L4A9Z1Z3 1794 aa20.56■□□□□ 0.88
PHF1-206ENST00000459809 A2MP01023 1474 aa20.56■□□□□ 0.88
PHF1-206ENST00000459809 HSPA2P54652 639 aa20.54■□□□□ 0.88
PHF1-206ENST00000459809 DHX29Q7Z478 1369 aaKnown RBP20.52■□□□□ 0.88
PHF1-206ENST00000459809 INO80Q9ULG1 1556 aaPredicted RBP20.51■□□□□ 0.87
PHF1-206ENST00000459809 GGT6Q6P531 493 aa20.51■□□□□ 0.87
PHF1-206ENST00000459809 CAMSAP2Q08AD1 1489 aa20.5■□□□□ 0.87
PHF1-206ENST00000459809 CCDC141Q6ZP82 1450 aa20.5■□□□□ 0.87
PHF1-206ENST00000459809 ZMYM3Q14202 1370 aa20.49■□□□□ 0.87
PHF1-206ENST00000459809 MIA2Q96PC5 1412 aa20.49■□□□□ 0.87
PHF1-206ENST00000459809 MYOM3Q5VTT5 1437 aa20.46■□□□□ 0.87
PHF1-206ENST00000459809 UHRF1BP1Q6BDS2 1440 aa20.46■□□□□ 0.87
PHF1-206ENST00000459809 DMRT2Q9Y5R5 561 aa20.46■□□□□ 0.87
PHF1-206ENST00000459809 PLXNC1O60486 1568 aa20.46■□□□□ 0.87
PHF1-206ENST00000459809 ILDR1Q86SU0 546 aaPredicted RBP20.45■□□□□ 0.86
PHF1-206ENST00000459809 KIF3BO15066 747 aa20.44■□□□□ 0.86
PHF1-206ENST00000459809 NPATQ14207 1427 aa20.43■□□□□ 0.86
PHF1-206ENST00000459809 ARHGEF5Q12774 1597 aa20.42■□□□□ 0.86
PHF1-206ENST00000459809 SETD1BQ9UPS6 1966 aaKnown RBP20.42■□□□□ 0.86
PHF1-206ENST00000459809 ADGBQ8N7X0 1667 aa20.42■□□□□ 0.86
PHF1-206ENST00000459809 PREX1Q8TCU6 1659 aa20.39■□□□□ 0.86
PHF1-206ENST00000459809 C3P01024 1663 aa20.38■□□□□ 0.85
PHF1-206ENST00000459809 WASHC2CQ9Y4E1 1318 aa20.37■□□□□ 0.85
PHF1-206ENST00000459809 MROH2AA6NES4 1674 aa20.35■□□□□ 0.85
PHF1-206ENST00000459809 FBXO41Q8TF61 875 aa20.34■□□□□ 0.85
PHF1-206ENST00000459809 PTPRKQ15262 1439 aa20.34■□□□□ 0.85
PHF1-206ENST00000459809 MAST1Q9Y2H9 1570 aa20.31■□□□□ 0.84
PHF1-206ENST00000459809 FAM135AQ9P2D6 1515 aa20.3■□□□□ 0.84
PHF1-206ENST00000459809 FGD6Q6ZV73 1430 aa20.29■□□□□ 0.84
PHF1-206ENST00000459809 CLTCQ00610 1675 aaKnown RBP20.29■□□□□ 0.84
PHF1-206ENST00000459809 ABCC5O15440 1437 aa20.28■□□□□ 0.84
PHF1-206ENST00000459809 PTPRTO14522 1441 aa20.27■□□□□ 0.84
PHF1-206ENST00000459809 CERKQ8TCT0 537 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms