RNA–Protein interactions for RNA: ENST00000459689.1

SUPT3H-204, Transcript of SPT3 homolog, SAGA and STAGA complex component, humanhuman

TSL 2

Gene SUPT3H, Length 396 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3H-204ENST00000459689 FAM163AQ96GL9 167 aaPredicted RBP12.99□□□□□ -0.33
SUPT3H-204ENST00000459689 SNPHO15079 494 aa12.97□□□□□ -0.33
SUPT3H-204ENST00000459689 CRISPLD2Q9H0B8 497 aa12.95□□□□□ -0.34
SUPT3H-204ENST00000459689 NCKAP5LQ9HCH0 1330 aa12.94□□□□□ -0.34
SUPT3H-204ENST00000459689 CADPS2Q86UW7 1296 aa12.94□□□□□ -0.34
SUPT3H-204ENST00000459689 SPRYD3Q8NCJ5 442 aa12.93□□□□□ -0.34
SUPT3H-204ENST00000459689 GPHNQ9NQX3 736 aaPredicted RBP12.93□□□□□ -0.34
SUPT3H-204ENST00000459689 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.93□□□□□ -0.34
SUPT3H-204ENST00000459689 TMC2Q8TDI7 906 aa12.91□□□□□ -0.34
SUPT3H-204ENST00000459689 FOXK1P85037 733 aa12.9□□□□□ -0.34
SUPT3H-204ENST00000459689 PAXIP1Q6ZW49 1069 aaPredicted RBP12.9□□□□□ -0.34
SUPT3H-204ENST00000459689 POTEMA6NI47 508 aa12.88□□□□□ -0.35
SUPT3H-204ENST00000459689 DSG2Q14126 1118 aa12.88□□□□□ -0.35
SUPT3H-204ENST00000459689 DOK7Q18PE1 504 aa12.88□□□□□ -0.35
SUPT3H-204ENST00000459689 POTEGQ6S5H5 508 aa12.87□□□□□ -0.35
SUPT3H-204ENST00000459689 CFAP44Q96MT7 982 aa12.85□□□□□ -0.35
SUPT3H-204ENST00000459689 GPR153Q6NV75 609 aa12.84□□□□□ -0.35
SUPT3H-204ENST00000459689 SLC34A2O95436 690 aa12.83□□□□□ -0.36
SUPT3H-204ENST00000459689 HOXB1P14653 301 aaPredicted RBP12.83□□□□□ -0.36
SUPT3H-204ENST00000459689 MFSD10Q14728 455 aa12.82□□□□□ -0.36
SUPT3H-204ENST00000459689 PLPP6Q8IY26 295 aa12.82□□□□□ -0.36
SUPT3H-204ENST00000459689 MARVELD3Q96A59 401 aa12.82□□□□□ -0.36
SUPT3H-204ENST00000459689 ZSWIM6Q9HCJ5 1215 aa12.82□□□□□ -0.36
SUPT3H-204ENST00000459689 PDE4AP27815 886 aa12.79□□□□□ -0.36
SUPT3H-204ENST00000459689 PPP1R15BQ5SWA1 713 aa12.79□□□□□ -0.36
SUPT3H-204ENST00000459689 ZNF710Q8N1W2 664 aa12.79□□□□□ -0.36
SUPT3H-204ENST00000459689 RIMBP2O15034 1052 aa12.77□□□□□ -0.37
SUPT3H-204ENST00000459689 LARP6Q9BRS8 491 aaKnown RBP12.77□□□□□ -0.37
SUPT3H-204ENST00000459689 KHSRPQ92945 711 aaKnown RBP eCLIP12.76□□□□□ -0.378e-7■■■□□ 18.1
SUPT3H-204ENST00000459689 POTEB3A0JP26 581 aa12.75□□□□□ -0.37
SUPT3H-204ENST00000459689 ARSIQ5FYB1 569 aa12.75□□□□□ -0.37
SUPT3H-204ENST00000459689 POTEBQ6S5H4 581 aa12.75□□□□□ -0.37
SUPT3H-204ENST00000459689 PTCD2Q8WV60 388 aaKnown RBP12.74□□□□□ -0.37
SUPT3H-204ENST00000459689 DDX27Q96GQ7 796 aaKnown RBP12.74□□□□□ -0.37
SUPT3H-204ENST00000459689 PCDHGA4Q9Y5G9 962 aa12.74□□□□□ -0.37
SUPT3H-204ENST00000459689 EMP3P54852 163 aa12.73□□□□□ -0.37
SUPT3H-204ENST00000459689 KDM4FA0A1W2PPD8 638 aa12.72□□□□□ -0.37
SUPT3H-204ENST00000459689 OXER1Q8TDS5 423 aa12.7□□□□□ -0.38
SUPT3H-204ENST00000459689 PLCB2Q00722 1185 aa12.69□□□□□ -0.38
SUPT3H-204ENST00000459689 TSHZ2Q9NRE2 1034 aa12.69□□□□□ -0.38
SUPT3H-204ENST00000459689 HS3ST6Q96QI5 342 aa12.68□□□□□ -0.38
SUPT3H-204ENST00000459689 NUDT7P0C024 238 aa12.67□□□□□ -0.38
SUPT3H-204ENST00000459689 EMILIN3Q9NT22 766 aa12.67□□□□□ -0.38
SUPT3H-204ENST00000459689 FAM205CA6NFA0 338 aa12.66□□□□□ -0.38
SUPT3H-204ENST00000459689 CAMK2BQ13554 666 aa12.66□□□□□ -0.38
SUPT3H-204ENST00000459689 UPF1Q92900 1129 aaKnown RBP eCLIP12.63□□□□□ -0.39
SUPT3H-204ENST00000459689 CDAN1Q8IWY9 1227 aa12.62□□□□□ -0.39
SUPT3H-204ENST00000459689 ZNF316A6NFI3 1004 aaPredicted RBP12.61□□□□□ -0.39
SUPT3H-204ENST00000459689 VARS2Q5ST30 1063 aaKnown RBP12.6□□□□□ -0.39
SUPT3H-204ENST00000459689 ERBB3P21860 1342 aa12.6□□□□□ -0.39
SUPT3H-204ENST00000459689 PCDH10Q9P2E7 1040 aa12.59□□□□□ -0.39
SUPT3H-204ENST00000459689 LHX6Q9UPM6 363 aa12.59□□□□□ -0.39
SUPT3H-204ENST00000459689 KRTAP3-3Q9BYR6 98 aa12.57□□□□□ -0.4
SUPT3H-204ENST00000459689 KRTAP3-2Q9BYR7 98 aa12.57□□□□□ -0.4
SUPT3H-204ENST00000459689 TBC1D12O60347 775 aa12.54□□□□□ -0.4
SUPT3H-204ENST00000459689 ZNF687Q8N1G0 1237 aa12.52□□□□□ -0.41
SUPT3H-204ENST00000459689 ANO8Q9HCE9 1232 aaPredicted RBP12.52□□□□□ -0.41
SUPT3H-204ENST00000459689 POTEEQ6S8J3 1075 aa12.5□□□□□ -0.41
SUPT3H-204ENST00000459689 DPYSL4O14531 572 aa12.49□□□□□ -0.41
SUPT3H-204ENST00000459689 EVI5O60447 810 aa12.49□□□□□ -0.41
SUPT3H-204ENST00000459689 E2F4Q16254 413 aa12.49□□□□□ -0.41
SUPT3H-204ENST00000459689 ARIH1Q9Y4X5 557 aaPredicted RBP12.48□□□□□ -0.41
SUPT3H-204ENST00000459689 MAP3K9P80192 1104 aa12.47□□□□□ -0.41
SUPT3H-204ENST00000459689 WDR70Q9NW82 654 aa12.44□□□□□ -0.42
SUPT3H-204ENST00000459689 PSDA5PKW4 1024 aaPredicted RBP12.43□□□□□ -0.42
SUPT3H-204ENST00000459689 FOSBP53539 338 aa12.43□□□□□ -0.42
SUPT3H-204ENST00000459689 PDIA6Q15084 440 aa12.43□□□□□ -0.42
SUPT3H-204ENST00000459689 HAP1P54257 671 aaPredicted RBP12.41□□□□□ -0.42
SUPT3H-204ENST00000459689 KCNV2Q8TDN2 545 aa12.41□□□□□ -0.42
SUPT3H-204ENST00000459689 JPH4Q96JJ6 628 aa12.41□□□□□ -0.42
SUPT3H-204ENST00000459689 KDM2AQ9Y2K7 1162 aa12.39□□□□□ -0.43
SUPT3H-204ENST00000459689 ZNF454Q8N9F8 522 aa12.38□□□□□ -0.43
SUPT3H-204ENST00000459689 PPP4R3BQ5MIZ7 849 aa12.37□□□□□ -0.43
SUPT3H-204ENST00000459689 AXIN2Q9Y2T1 843 aa12.37□□□□□ -0.43
SUPT3H-204ENST00000459689 PCDHGA10Q9Y5H3 936 aa12.37□□□□□ -0.43
SUPT3H-204ENST00000459689 PBX2P40425 430 aa12.36□□□□□ -0.43
SUPT3H-204ENST00000459689 PTGER2P43116 358 aa12.36□□□□□ -0.43
SUPT3H-204ENST00000459689 SPNS2Q8IVW8 549 aa12.33□□□□□ -0.44
SUPT3H-204ENST00000459689 BCL2L12Q9HB09 334 aa12.33□□□□□ -0.44
SUPT3H-204ENST00000459689 SPDYE16A6NNV3 312 aaPredicted RBP12.32□□□□□ -0.44
SUPT3H-204ENST00000459689 PHF14O94880 888 aa12.32□□□□□ -0.44
SUPT3H-204ENST00000459689 LSM11P83369 360 aaKnown RBP eCLIP12.32□□□□□ -0.449e-7■■■□□ 16.4
SUPT3H-204ENST00000459689 ADAM33Q9BZ11 813 aa12.32□□□□□ -0.44
SUPT3H-204ENST00000459689 ARHGAP33O14559 1287 aa12.31□□□□□ -0.44
SUPT3H-204ENST00000459689 PSEN2P49810 448 aa12.31□□□□□ -0.44
SUPT3H-204ENST00000459689 ZDHHC16Q969W1 377 aa12.31□□□□□ -0.44
SUPT3H-204ENST00000459689 DMRTA1Q5VZB9 504 aa12.3□□□□□ -0.44
SUPT3H-204ENST00000459689 ARHGEF1Q92888 912 aaKnown RBP12.3□□□□□ -0.44
SUPT3H-204ENST00000459689 DDX12PQ92771 950 aa12.29□□□□□ -0.44
SUPT3H-204ENST00000459689 PRIM1P49642 420 aaKnown RBP12.26□□□□□ -0.45
SUPT3H-204ENST00000459689 TYW1BQ6NUM6 668 aa12.26□□□□□ -0.45
SUPT3H-204ENST00000459689 KCNK17Q96T54 332 aa12.26□□□□□ -0.45
SUPT3H-204ENST00000459689 P3H3Q8IVL6 736 aa12.25□□□□□ -0.45
SUPT3H-204ENST00000459689 PLSCR2Q9NRY7 297 aa12.25□□□□□ -0.45
SUPT3H-204ENST00000459689 VSIG10Q8N0Z9 540 aa12.24□□□□□ -0.45
SUPT3H-204ENST00000459689 FBXW7Q969H0 707 aa12.24□□□□□ -0.45
SUPT3H-204ENST00000459689 EPAS1Q99814 870 aa12.24□□□□□ -0.45
SUPT3H-204ENST00000459689 MMRN1Q13201 1228 aa12.23□□□□□ -0.45
SUPT3H-204ENST00000459689 ANKRD13DQ6ZTN6 518 aa12.22□□□□□ -0.45
SUPT3H-204ENST00000459689 PTPREP23469 700 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms