RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 CDC42BPBQ9Y5S2 1711 aa25.99■■□□□ 1.75
CPSF6-203ENST00000456847 ARHGEF40Q8TER5 1519 aa25.98■■□□□ 1.75
CPSF6-203ENST00000456847 SCAPERQ9BY12 1400 aa25.97■■□□□ 1.75
CPSF6-203ENST00000456847 ZMYM4Q5VZL5 1548 aa25.97■■□□□ 1.75
CPSF6-203ENST00000456847 POGZQ7Z3K3 1410 aa25.94■■□□□ 1.74
CPSF6-203ENST00000456847 CDC42BPAQ5VT25 1732 aa25.94■■□□□ 1.74
CPSF6-203ENST00000456847 ZFYVE16Q7Z3T8 1539 aa25.92■■□□□ 1.74
CPSF6-203ENST00000456847 MTUS2Q5JR59 1369 aa25.91■■□□□ 1.74
CPSF6-203ENST00000456847 MAGI2Q86UL8 1455 aa25.87■■□□□ 1.73
CPSF6-203ENST00000456847 EHBP1L1Q8N3D4 1523 aa25.87■■□□□ 1.73
CPSF6-203ENST00000456847 ARID4BQ4LE39 1312 aaPredicted RBP25.87■■□□□ 1.73
CPSF6-203ENST00000456847 ZNF518AQ6AHZ1 1483 aa25.86■■□□□ 1.73
CPSF6-203ENST00000456847 YEATS2Q9ULM3 1422 aa25.85■■□□□ 1.73
CPSF6-203ENST00000456847 ABCC1P33527 1531 aa25.85■■□□□ 1.73
CPSF6-203ENST00000456847 ITSN2Q9NZM3 1697 aa25.85■■□□□ 1.73
CPSF6-203ENST00000456847 BCORL1Q5H9F3 1711 aa25.84■■□□□ 1.73
CPSF6-203ENST00000456847 VPS8Q8N3P4 1428 aa25.83■■□□□ 1.72
CPSF6-203ENST00000456847 ADAMTSL3P82987 1691 aa25.82■■□□□ 1.72
CPSF6-203ENST00000456847 KDM5CP41229 1560 aa25.81■■□□□ 1.72
CPSF6-203ENST00000456847 CCNB3Q8WWL7 1395 aa25.8■■□□□ 1.72
CPSF6-203ENST00000456847 HECW2Q9P2P5 1572 aa25.8■■□□□ 1.72
CPSF6-203ENST00000456847 GPATCH8Q9UKJ3 1502 aaKnown RBP25.8■■□□□ 1.72
CPSF6-203ENST00000456847 SAMD9LQ8IVG5 1584 aa25.78■■□□□ 1.72
CPSF6-203ENST00000456847 MYT1LQ9UL68 1186 aa25.78■■□□□ 1.72
CPSF6-203ENST00000456847 ZNF777Q9ULD5 760 aaPredicted RBP25.78■■□□□ 1.72
CPSF6-203ENST00000456847 TIAM1Q13009 1591 aa25.78■■□□□ 1.72
CPSF6-203ENST00000456847 MADDQ8WXG6 1647 aa25.77■■□□□ 1.72
CPSF6-203ENST00000456847 SIGLEC1Q9BZZ2 1709 aa25.77■■□□□ 1.72
CPSF6-203ENST00000456847 AFAP1Q8N556 730 aa25.76■■□□□ 1.72
CPSF6-203ENST00000456847 ARHGEF12Q9NZN5 1544 aa25.76■■□□□ 1.71
CPSF6-203ENST00000456847 SUPT6HQ7KZ85 1726 aaKnown RBP25.75■■□□□ 1.71
CPSF6-203ENST00000456847 SYCP2Q9BX26 1530 aa25.74■■□□□ 1.71
CPSF6-203ENST00000456847 C9orf84Q5VXU9 1444 aa25.74■■□□□ 1.71
CPSF6-203ENST00000456847 TRAPPC8Q9Y2L5 1435 aa25.74■■□□□ 1.71
CPSF6-203ENST00000456847 ATP10AO60312 1499 aa25.74■■□□□ 1.71
CPSF6-203ENST00000456847 CFDP1Q9UEE9 299 aaPredicted RBP25.73■■□□□ 1.71
CPSF6-203ENST00000456847 RIMS1Q86UR5 1692 aaKnown RBP25.71■■□□□ 1.71
CPSF6-203ENST00000456847 DIP2CQ9Y2E4 1556 aa25.7■■□□□ 1.71
CPSF6-203ENST00000456847 ABCA6Q8N139 1617 aa25.7■■□□□ 1.7
CPSF6-203ENST00000456847 PTPRMP28827 1452 aa25.69■■□□□ 1.7
CPSF6-203ENST00000456847 PLEKHH2Q8IVE3 1493 aa25.69■■□□□ 1.7
CPSF6-203ENST00000456847 MLH3Q9UHC1 1453 aa25.69■■□□□ 1.7
CPSF6-203ENST00000456847 NCOA2Q15596 1464 aa25.67■■□□□ 1.7
CPSF6-203ENST00000456847 FER1L4A9Z1Z3 1794 aa25.66■■□□□ 1.7
CPSF6-203ENST00000456847 MLECQ14165 292 aa25.66■■□□□ 1.7
CPSF6-203ENST00000456847 KIDINS220Q9ULH0 1771 aa25.65■■□□□ 1.7
CPSF6-203ENST00000456847 LRRC9Q6ZRR7 1453 aa25.64■■□□□ 1.69
CPSF6-203ENST00000456847 HNRNPMP52272 730 aaKnown RBP eCLIP25.63■■□□□ 1.69
CPSF6-203ENST00000456847 KIAA1107Q9UPP5 1409 aa25.63■■□□□ 1.69
CPSF6-203ENST00000456847 REREQ9P2R6 1566 aa25.62■■□□□ 1.69
CPSF6-203ENST00000456847 MAP3K1Q13233 1512 aa25.62■■□□□ 1.69
CPSF6-203ENST00000456847 SPAG9O60271 1321 aaKnown RBP25.58■■□□□ 1.69
CPSF6-203ENST00000456847 ATP7AQ04656 1500 aa25.58■■□□□ 1.69
CPSF6-203ENST00000456847 INO80Q9ULG1 1556 aaPredicted RBP25.57■■□□□ 1.68
CPSF6-203ENST00000456847 ZNF644Q9H582 1327 aaPredicted RBP25.56■■□□□ 1.68
CPSF6-203ENST00000456847 APLP2Q06481 763 aa25.55■■□□□ 1.68
CPSF6-203ENST00000456847 PLPPR3Q6T4P5 718 aa25.55■■□□□ 1.68
CPSF6-203ENST00000456847 CAMSAP2Q08AD1 1489 aa25.54■■□□□ 1.68
CPSF6-203ENST00000456847 AGLP35573 1532 aa25.52■■□□□ 1.68
CPSF6-203ENST00000456847 KANK4Q5T7N3 995 aaPredicted RBP25.52■■□□□ 1.68
CPSF6-203ENST00000456847 MBD5Q9P267 1494 aa25.49■■□□□ 1.67
CPSF6-203ENST00000456847 ADGBQ8N7X0 1667 aa25.48■■□□□ 1.67
CPSF6-203ENST00000456847 CCDC141Q6ZP82 1450 aa25.47■■□□□ 1.67
CPSF6-203ENST00000456847 A2MP01023 1474 aa25.44■■□□□ 1.66
CPSF6-203ENST00000456847 PLXNC1O60486 1568 aa25.43■■□□□ 1.66
CPSF6-203ENST00000456847 MYOM3Q5VTT5 1437 aa25.43■■□□□ 1.66
CPSF6-203ENST00000456847 ARHGEF5Q12774 1597 aa25.43■■□□□ 1.66
CPSF6-203ENST00000456847 ESF1Q9H501 851 aaKnown RBP25.42■■□□□ 1.66
CPSF6-203ENST00000456847 RTEL1-TNFRSF6BF6WH68 1400 aa25.41■■□□□ 1.66
CPSF6-203ENST00000456847 LMTK3Q96Q04 1460 aa25.39■■□□□ 1.65
CPSF6-203ENST00000456847 MIA2Q96PC5 1412 aa25.38■■□□□ 1.65
CPSF6-203ENST00000456847 RSPH4AQ5TD94 716 aa25.38■■□□□ 1.65
CPSF6-203ENST00000456847 C3P01024 1663 aa25.37■■□□□ 1.65
CPSF6-203ENST00000456847 CEBPAP49715 358 aaPredicted RBP25.35■■□□□ 1.65
CPSF6-203ENST00000456847 PREX1Q8TCU6 1659 aa25.35■■□□□ 1.65
CPSF6-203ENST00000456847 CNTLNQ9NXG0 1405 aa25.34■■□□□ 1.65
CPSF6-203ENST00000456847 MROH2AA6NES4 1674 aa25.32■■□□□ 1.64
CPSF6-203ENST00000456847 TSPY4P0CV99 314 aa25.32■■□□□ 1.64
CPSF6-203ENST00000456847 TSPY10P0CW01 314 aa25.32■■□□□ 1.64
CPSF6-203ENST00000456847 CLTCQ00610 1675 aaKnown RBP25.31■■□□□ 1.64
CPSF6-203ENST00000456847 PTPN23Q9H3S7 1636 aa25.31■■□□□ 1.64
CPSF6-203ENST00000456847 MAST1Q9Y2H9 1570 aa25.3■■□□□ 1.64
CPSF6-203ENST00000456847 DHX29Q7Z478 1369 aaKnown RBP25.29■■□□□ 1.64
CPSF6-203ENST00000456847 GGT6Q6P531 493 aa25.28■■□□□ 1.64
CPSF6-203ENST00000456847 CROCC2H7BZ55 1655 aa25.26■■□□□ 1.63
CPSF6-203ENST00000456847 HSPA2P54652 639 aa25.25■■□□□ 1.63
CPSF6-203ENST00000456847 FGD6Q6ZV73 1430 aa25.25■■□□□ 1.63
CPSF6-203ENST00000456847 SETD1BQ9UPS6 1966 aaKnown RBP25.24■■□□□ 1.63
CPSF6-203ENST00000456847 UHRF1BP1Q6BDS2 1440 aa25.23■■□□□ 1.63
CPSF6-203ENST00000456847 KIF3BO15066 747 aa25.21■■□□□ 1.63
CPSF6-203ENST00000456847 TCOF1Q13428 1488 aaKnown RBP25.2■■□□□ 1.62
CPSF6-203ENST00000456847 DNMT1P26358 1616 aaKnown RBP25.19■■□□□ 1.62
CPSF6-203ENST00000456847 ZMYM3Q14202 1370 aa25.19■■□□□ 1.62
CPSF6-203ENST00000456847 PPP6R1Q9UPN7 881 aa25.18■■□□□ 1.62
CPSF6-203ENST00000456847 SHANK2Q9UPX8 1470 aa25.17■■□□□ 1.62
CPSF6-203ENST00000456847 ABCC5O15440 1437 aa25.16■■□□□ 1.62
CPSF6-203ENST00000456847 DAPK1P53355 1430 aa25.16■■□□□ 1.62
CPSF6-203ENST00000456847 EIF2AK4Q9P2K8 1649 aaKnown RBP25.15■■□□□ 1.62
CPSF6-203ENST00000456847 KDM5DQ9BY66 1539 aa25.15■■□□□ 1.62
CPSF6-203ENST00000456847 NPATQ14207 1427 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms