RNA–Protein interactions for RNA: ENST00000455814.2

LYRM4-202, Transcript of LYR motif containing 4, humanhuman

TSL 3

Gene LYRM4, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM4-202ENST00000455814 ZNF777Q9ULD5 760 aaPredicted RBP13.85□□□□□ -0.19
LYRM4-202ENST00000455814 ZNF518AQ6AHZ1 1483 aa13.85□□□□□ -0.19
LYRM4-202ENST00000455814 CEP162Q5TB80 1403 aa13.84□□□□□ -0.19
LYRM4-202ENST00000455814 AFAP1Q8N556 730 aa13.84□□□□□ -0.19
LYRM4-202ENST00000455814 ZFYVE16Q7Z3T8 1539 aa13.84□□□□□ -0.19
LYRM4-202ENST00000455814 MYO5CQ9NQX4 1742 aa13.84□□□□□ -0.19
LYRM4-202ENST00000455814 CCNB3Q8WWL7 1395 aa13.83□□□□□ -0.19
LYRM4-202ENST00000455814 PCF11O94913 1555 aaKnown RBP13.83□□□□□ -0.19
LYRM4-202ENST00000455814 ATP10AO60312 1499 aa13.83□□□□□ -0.2
LYRM4-202ENST00000455814 ZMYM4Q5VZL5 1548 aa13.83□□□□□ -0.2
LYRM4-202ENST00000455814 APLP2Q06481 763 aa13.82□□□□□ -0.2
LYRM4-202ENST00000455814 MLECQ14165 292 aa13.81□□□□□ -0.2
LYRM4-202ENST00000455814 ARHGEF40Q8TER5 1519 aa13.8□□□□□ -0.2
LYRM4-202ENST00000455814 C9orf84Q5VXU9 1444 aa13.8□□□□□ -0.2
LYRM4-202ENST00000455814 PLEKHH2Q8IVE3 1493 aa13.8□□□□□ -0.2
LYRM4-202ENST00000455814 FRMPD1Q5SYB0 1578 aa13.79□□□□□ -0.2
LYRM4-202ENST00000455814 RICTORQ6R327 1708 aa13.79□□□□□ -0.2
LYRM4-202ENST00000455814 LOC105371045A0A1W2PR82 267 aa13.79□□□□□ -0.2
LYRM4-202ENST00000455814 RSPH4AQ5TD94 716 aa13.79□□□□□ -0.2
LYRM4-202ENST00000455814 PTPRMP28827 1452 aa13.79□□□□□ -0.2
LYRM4-202ENST00000455814 YEATS2Q9ULM3 1422 aa13.78□□□□□ -0.2
LYRM4-202ENST00000455814 SPAG9O60271 1321 aaKnown RBP13.77□□□□□ -0.21
LYRM4-202ENST00000455814 MLH3Q9UHC1 1453 aa13.76□□□□□ -0.21
LYRM4-202ENST00000455814 KIAA1107Q9UPP5 1409 aa13.76□□□□□ -0.21
LYRM4-202ENST00000455814 GPATCH8Q9UKJ3 1502 aaKnown RBP13.75□□□□□ -0.21
LYRM4-202ENST00000455814 HNRNPMP52272 730 aaKnown RBP eCLIP13.75□□□□□ -0.21
LYRM4-202ENST00000455814 PLPPR3Q6T4P5 718 aa13.75□□□□□ -0.21
LYRM4-202ENST00000455814 ADAMTSL3P82987 1691 aa13.75□□□□□ -0.21
LYRM4-202ENST00000455814 BCORL1Q5H9F3 1711 aa13.74□□□□□ -0.21
LYRM4-202ENST00000455814 PREX2Q70Z35 1606 aa13.73□□□□□ -0.21
LYRM4-202ENST00000455814 EHBP1L1Q8N3D4 1523 aa13.72□□□□□ -0.21
LYRM4-202ENST00000455814 VPS8Q8N3P4 1428 aa13.72□□□□□ -0.21
LYRM4-202ENST00000455814 TRAPPC8Q9Y2L5 1435 aa13.72□□□□□ -0.21
LYRM4-202ENST00000455814 KDM5CP41229 1560 aa13.71□□□□□ -0.21
LYRM4-202ENST00000455814 ABCC1P33527 1531 aa13.71□□□□□ -0.21
LYRM4-202ENST00000455814 LRRIQ1Q96JM4 1722 aa13.71□□□□□ -0.21
LYRM4-202ENST00000455814 TSPY4P0CV99 314 aa13.71□□□□□ -0.21
LYRM4-202ENST00000455814 TSPY10P0CW01 314 aa13.71□□□□□ -0.21
LYRM4-202ENST00000455814 PPP6R1Q9UPN7 881 aa13.7□□□□□ -0.22
LYRM4-202ENST00000455814 HECW2Q9P2P5 1572 aa13.7□□□□□ -0.22
LYRM4-202ENST00000455814 CDC42BPBQ9Y5S2 1711 aa13.7□□□□□ -0.22
LYRM4-202ENST00000455814 MADDQ8WXG6 1647 aa13.68□□□□□ -0.22
LYRM4-202ENST00000455814 CNTLNQ9NXG0 1405 aa13.67□□□□□ -0.22
LYRM4-202ENST00000455814 ARHGEF12Q9NZN5 1544 aa13.67□□□□□ -0.22
LYRM4-202ENST00000455814 REREQ9P2R6 1566 aa13.66□□□□□ -0.22
LYRM4-202ENST00000455814 AGLP35573 1532 aa13.66□□□□□ -0.22
LYRM4-202ENST00000455814 DMRT2Q9Y5R5 561 aa13.66□□□□□ -0.22
LYRM4-202ENST00000455814 CDC42BPAQ5VT25 1732 aa13.66□□□□□ -0.22
LYRM4-202ENST00000455814 RTEL1-TNFRSF6BF6WH68 1400 aa13.64□□□□□ -0.23
LYRM4-202ENST00000455814 RIMS1Q86UR5 1692 aaKnown RBP13.64□□□□□ -0.23
LYRM4-202ENST00000455814 ITSN2Q9NZM3 1697 aa13.64□□□□□ -0.23
LYRM4-202ENST00000455814 NCOA2Q15596 1464 aa13.64□□□□□ -0.23
LYRM4-202ENST00000455814 MAP3K1Q13233 1512 aa13.64□□□□□ -0.23
LYRM4-202ENST00000455814 SYCP2Q9BX26 1530 aa13.64□□□□□ -0.23
LYRM4-202ENST00000455814 SAMD9LQ8IVG5 1584 aa13.63□□□□□ -0.23
LYRM4-202ENST00000455814 CEBPAP49715 358 aaPredicted RBP13.63□□□□□ -0.23
LYRM4-202ENST00000455814 GGT6Q6P531 493 aa13.63□□□□□ -0.23
LYRM4-202ENST00000455814 ZNF644Q9H582 1327 aaPredicted RBP13.63□□□□□ -0.23
LYRM4-202ENST00000455814 DIP2CQ9Y2E4 1556 aa13.62□□□□□ -0.23
LYRM4-202ENST00000455814 SUPT6HQ7KZ85 1726 aaKnown RBP13.62□□□□□ -0.23
LYRM4-202ENST00000455814 A2MP01023 1474 aa13.61□□□□□ -0.23
LYRM4-202ENST00000455814 LRRC9Q6ZRR7 1453 aa13.61□□□□□ -0.23
LYRM4-202ENST00000455814 TIAM1Q13009 1591 aa13.61□□□□□ -0.23
LYRM4-202ENST00000455814 ATP7AQ04656 1500 aa13.59□□□□□ -0.23
LYRM4-202ENST00000455814 UHRF1BP1Q6BDS2 1440 aa13.59□□□□□ -0.23
LYRM4-202ENST00000455814 FER1L4A9Z1Z3 1794 aa13.59□□□□□ -0.23
LYRM4-202ENST00000455814 HSPA2P54652 639 aa13.59□□□□□ -0.23
LYRM4-202ENST00000455814 DHX29Q7Z478 1369 aaKnown RBP13.58□□□□□ -0.23
LYRM4-202ENST00000455814 MIA2Q96PC5 1412 aa13.58□□□□□ -0.24
LYRM4-202ENST00000455814 ABCA6Q8N139 1617 aa13.58□□□□□ -0.24
LYRM4-202ENST00000455814 CCDC141Q6ZP82 1450 aa13.58□□□□□ -0.24
LYRM4-202ENST00000455814 LMTK3Q96Q04 1460 aa13.58□□□□□ -0.24
LYRM4-202ENST00000455814 MBD5Q9P267 1494 aa13.58□□□□□ -0.24
LYRM4-202ENST00000455814 KIF3BO15066 747 aa13.57□□□□□ -0.24
LYRM4-202ENST00000455814 KANK4Q5T7N3 995 aaPredicted RBP13.57□□□□□ -0.24
LYRM4-202ENST00000455814 KIDINS220Q9ULH0 1771 aa13.57□□□□□ -0.24
LYRM4-202ENST00000455814 ZMYM3Q14202 1370 aa13.57□□□□□ -0.24
LYRM4-202ENST00000455814 CAMSAP2Q08AD1 1489 aa13.55□□□□□ -0.24
LYRM4-202ENST00000455814 WASHC2CQ9Y4E1 1318 aa13.54□□□□□ -0.24
LYRM4-202ENST00000455814 NPATQ14207 1427 aa13.54□□□□□ -0.24
LYRM4-202ENST00000455814 MYOM3Q5VTT5 1437 aa13.54□□□□□ -0.24
LYRM4-202ENST00000455814 SETD1BQ9UPS6 1966 aaKnown RBP13.53□□□□□ -0.24
LYRM4-202ENST00000455814 ILDR1Q86SU0 546 aaPredicted RBP13.53□□□□□ -0.24
LYRM4-202ENST00000455814 SIGLEC1Q9BZZ2 1709 aa13.51□□□□□ -0.25
LYRM4-202ENST00000455814 INO80Q9ULG1 1556 aaPredicted RBP13.51□□□□□ -0.25
LYRM4-202ENST00000455814 FBXO41Q8TF61 875 aa13.51□□□□□ -0.25
LYRM4-202ENST00000455814 ADGBQ8N7X0 1667 aa13.5□□□□□ -0.25
LYRM4-202ENST00000455814 ARHGEF5Q12774 1597 aa13.5□□□□□ -0.25
LYRM4-202ENST00000455814 PREX1Q8TCU6 1659 aa13.49□□□□□ -0.25
LYRM4-202ENST00000455814 PLXNC1O60486 1568 aa13.48□□□□□ -0.25
LYRM4-202ENST00000455814 PKD2Q13563 968 aa13.47□□□□□ -0.25
LYRM4-202ENST00000455814 FAM135AQ9P2D6 1515 aa13.46□□□□□ -0.25
LYRM4-202ENST00000455814 MROH2AA6NES4 1674 aa13.45□□□□□ -0.26
LYRM4-202ENST00000455814 C3P01024 1663 aa13.44□□□□□ -0.26
LYRM4-202ENST00000455814 FAM50AQ14320 339 aaKnown RBP13.44□□□□□ -0.26
LYRM4-202ENST00000455814 THEMISQ8N1K5 641 aaPredicted RBP13.44□□□□□ -0.26
LYRM4-202ENST00000455814 CERKQ8TCT0 537 aa13.44□□□□□ -0.26
LYRM4-202ENST00000455814 ANKRD30AQ9BXX3 1397 aa13.44□□□□□ -0.26
LYRM4-202ENST00000455814 PTPRTO14522 1441 aa13.43□□□□□ -0.26
LYRM4-202ENST00000455814 PTPRKQ15262 1439 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms