RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 ARID3CA6NKF2 412 aa7.94□□□□□ -1.14
GTF3C3-208ENST00000455546 ECM2O94769 699 aaPredicted RBP7.94□□□□□ -1.14
GTF3C3-208ENST00000455546 KCNH8Q96L42 1107 aa7.94□□□□□ -1.14
GTF3C3-208ENST00000455546 UHRF1BP1LA0JNW5 1464 aa7.94□□□□□ -1.14
GTF3C3-208ENST00000455546 RANGAP1P46060 587 aaPredicted RBP7.93□□□□□ -1.14
GTF3C3-208ENST00000455546 CIZ1Q9ULV3 898 aaPredicted RBP7.93□□□□□ -1.14
GTF3C3-208ENST00000455546 PLB1Q6P1J6 1458 aa7.93□□□□□ -1.14
GTF3C3-208ENST00000455546 KIAA0556O60303 1618 aa7.92□□□□□ -1.14
GTF3C3-208ENST00000455546 CTTNBP2Q8WZ74 1663 aa7.92□□□□□ -1.14
GTF3C3-208ENST00000455546 FAM9AQ8IZU1 332 aaPredicted RBP7.92□□□□□ -1.14
GTF3C3-208ENST00000455546 ZCCHC11Q5TAX3 1644 aaKnown RBP7.92□□□□□ -1.14
GTF3C3-208ENST00000455546 PPRC1Q5VV67 1664 aaKnown RBP7.92□□□□□ -1.14
GTF3C3-208ENST00000455546 PRR29P0C7W0 189 aa7.91□□□□□ -1.14
GTF3C3-208ENST00000455546 KDM5BQ9UGL1 1544 aa7.91□□□□□ -1.14
GTF3C3-208ENST00000455546 EPRSP07814 1512 aaKnown RBP7.9□□□□□ -1.14
GTF3C3-208ENST00000455546 PRXQ9BXM0 1461 aa7.9□□□□□ -1.14
GTF3C3-208ENST00000455546 COL17A1Q9UMD9 1497 aaPredicted RBP7.9□□□□□ -1.14
GTF3C3-208ENST00000455546 ZBTB47Q9UFB7 747 aaPredicted RBP7.9□□□□□ -1.14
GTF3C3-208ENST00000455546 GLI2P10070 1586 aa7.89□□□□□ -1.15
GTF3C3-208ENST00000455546 PITPNM1O00562 1244 aa7.89□□□□□ -1.15
GTF3C3-208ENST00000455546 GOLGA3Q08378 1498 aa7.87□□□□□ -1.15
GTF3C3-208ENST00000455546 RGL2O15211 777 aa7.87□□□□□ -1.15
GTF3C3-208ENST00000455546 CREBZFQ9NS37 354 aa7.87□□□□□ -1.15
GTF3C3-208ENST00000455546 MAP3K4Q9Y6R4 1608 aa7.87□□□□□ -1.15
GTF3C3-208ENST00000455546 ABCA8O94911 1581 aa7.86□□□□□ -1.15
GTF3C3-208ENST00000455546 WDR7Q9Y4E6 1490 aa7.86□□□□□ -1.15
GTF3C3-208ENST00000455546 CD109Q6YHK3 1445 aa7.85□□□□□ -1.15
GTF3C3-208ENST00000455546 ATP10BO94823 1461 aa7.83□□□□□ -1.16
GTF3C3-208ENST00000455546 TEX14Q8IWB6 1497 aa7.82□□□□□ -1.16
GTF3C3-208ENST00000455546 NUBP1P53384 320 aa7.82□□□□□ -1.16
GTF3C3-208ENST00000455546 MNX1P50219 401 aaPredicted RBP7.81□□□□□ -1.16
GTF3C3-208ENST00000455546 PLCB2Q00722 1185 aa7.81□□□□□ -1.16
GTF3C3-208ENST00000455546 DCAF8Q5TAQ9 597 aa7.81□□□□□ -1.16
GTF3C3-208ENST00000455546 ADGRL1O94910 1474 aa7.81□□□□□ -1.16
GTF3C3-208ENST00000455546 CFAP43Q8NDM7 1665 aa7.8□□□□□ -1.16
GTF3C3-208ENST00000455546 CHADLQ6NUI6 762 aa7.8□□□□□ -1.16
GTF3C3-208ENST00000455546 FHOD3Q2V2M9 1422 aa7.79□□□□□ -1.16
GTF3C3-208ENST00000455546 MAGI3Q5TCQ9 1506 aa7.79□□□□□ -1.16
GTF3C3-208ENST00000455546 RAPGEF3O95398 923 aa7.79□□□□□ -1.16
GTF3C3-208ENST00000455546 UBTFP17480 764 aaKnown RBP7.79□□□□□ -1.16
GTF3C3-208ENST00000455546 SAMD9Q5K651 1589 aa7.79□□□□□ -1.16
GTF3C3-208ENST00000455546 RAPGEF6Q8TEU7 1601 aa7.78□□□□□ -1.16
GTF3C3-208ENST00000455546 ATP1B4Q9UN42 357 aaPredicted RBP7.78□□□□□ -1.16
GTF3C3-208ENST00000455546 PLEKHD1A6NEE1 506 aa7.77□□□□□ -1.17
GTF3C3-208ENST00000455546 HAP1P54257 671 aaPredicted RBP7.77□□□□□ -1.17
GTF3C3-208ENST00000455546 GSE1Q14687 1217 aa7.77□□□□□ -1.17
GTF3C3-208ENST00000455546 RASEFQ8IZ41 740 aa7.77□□□□□ -1.17
GTF3C3-208ENST00000455546 EEA1Q15075 1411 aa7.77□□□□□ -1.17
GTF3C3-208ENST00000455546 NUP153P49790 1475 aaKnown RBP7.76□□□□□ -1.17
GTF3C3-208ENST00000455546 ABCA9Q8IUA7 1624 aa7.75□□□□□ -1.17
GTF3C3-208ENST00000455546 RNF25Q96BH1 459 aaPredicted RBP7.75□□□□□ -1.17
GTF3C3-208ENST00000455546 FAM212AQ96EL1 285 aa7.75□□□□□ -1.17
GTF3C3-208ENST00000455546 KIF21BO75037 1637 aa7.74□□□□□ -1.17
GTF3C3-208ENST00000455546 ARAP3Q8WWN8 1544 aa7.74□□□□□ -1.17
GTF3C3-208ENST00000455546 CHGAP10645 457 aaKnown RBP7.74□□□□□ -1.17
GTF3C3-208ENST00000455546 ARID4BQ4LE39 1312 aaPredicted RBP7.73□□□□□ -1.17
GTF3C3-208ENST00000455546 CFAP44Q96MT7 982 aa7.72□□□□□ -1.17
GTF3C3-208ENST00000455546 PAXIP1Q6ZW49 1069 aaPredicted RBP7.71□□□□□ -1.18
GTF3C3-208ENST00000455546 ILDR1Q86SU0 546 aaPredicted RBP7.71□□□□□ -1.18
GTF3C3-208ENST00000455546 BBXQ8WY36 941 aaPredicted RBP7.71□□□□□ -1.18
GTF3C3-208ENST00000455546 CDK13Q14004 1512 aaKnown RBP7.71□□□□□ -1.18
GTF3C3-208ENST00000455546 PHLDB1Q86UU1 1377 aa7.71□□□□□ -1.18
GTF3C3-208ENST00000455546 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.7□□□□□ -1.18
GTF3C3-208ENST00000455546 PYGBP11216 843 aa7.7□□□□□ -1.18
GTF3C3-208ENST00000455546 PRKAR2AP13861 404 aaKnown RBP7.7□□□□□ -1.18
GTF3C3-208ENST00000455546 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.7□□□□□ -1.18
GTF3C3-208ENST00000455546 HECW2Q9P2P5 1572 aa7.7□□□□□ -1.18
GTF3C3-208ENST00000455546 AKNAQ7Z591 1439 aa7.69□□□□□ -1.18
GTF3C3-208ENST00000455546 NEO1Q92859 1461 aa7.69□□□□□ -1.18
GTF3C3-208ENST00000455546 ARHGAP35Q9NRY4 1499 aa7.68□□□□□ -1.18
GTF3C3-208ENST00000455546 EFCAB5A4FU69 1503 aa7.68□□□□□ -1.18
GTF3C3-208ENST00000455546 FRMPD1Q5SYB0 1578 aa7.68□□□□□ -1.18
GTF3C3-208ENST00000455546 MLECQ14165 292 aa7.68□□□□□ -1.18
GTF3C3-208ENST00000455546 TSPYL2Q9H2G4 693 aaPredicted RBP7.68□□□□□ -1.18
GTF3C3-208ENST00000455546 FANCAO15360 1455 aa7.68□□□□□ -1.18
GTF3C3-208ENST00000455546 TTC37Q6PGP7 1564 aa7.67□□□□□ -1.18
GTF3C3-208ENST00000455546 FARP1Q9Y4F1 1045 aaPredicted RBP7.67□□□□□ -1.18
GTF3C3-208ENST00000455546 DENND4BO75064 1496 aaPredicted RBP7.67□□□□□ -1.18
GTF3C3-208ENST00000455546 ADAMTSL3P82987 1691 aa7.67□□□□□ -1.18
GTF3C3-208ENST00000455546 RICTORQ6R327 1708 aa7.66□□□□□ -1.18
GTF3C3-208ENST00000455546 RIOK3O14730 519 aaKnown RBP7.66□□□□□ -1.18
GTF3C3-208ENST00000455546 PTPRMP28827 1452 aa7.66□□□□□ -1.18
GTF3C3-208ENST00000455546 LRRIQ1Q96JM4 1722 aa7.66□□□□□ -1.18
GTF3C3-208ENST00000455546 PLCH2O75038 1416 aa7.65□□□□□ -1.18
GTF3C3-208ENST00000455546 BCORL1Q5H9F3 1711 aa7.65□□□□□ -1.18
GTF3C3-208ENST00000455546 EFCAB2Q5VUJ9 269 aa7.65□□□□□ -1.18
GTF3C3-208ENST00000455546 FMN1Q68DA7 1419 aa7.65□□□□□ -1.18
GTF3C3-208ENST00000455546 SCAPERQ9BY12 1400 aa7.65□□□□□ -1.18
GTF3C3-208ENST00000455546 YEATS2Q9ULM3 1422 aa7.65□□□□□ -1.18
GTF3C3-208ENST00000455546 CDK11AQ9UQ88 783 aaPredicted RBP7.65□□□□□ -1.18
GTF3C3-208ENST00000455546 SIGLEC1Q9BZZ2 1709 aa7.64□□□□□ -1.19
GTF3C3-208ENST00000455546 FXR2P51116 673 aaKnown RBP eCLIP7.64□□□□□ -1.19
GTF3C3-208ENST00000455546 CHRDL2Q6WN34 429 aa7.64□□□□□ -1.19
GTF3C3-208ENST00000455546 AFAP1Q8N556 730 aa7.64□□□□□ -1.19
GTF3C3-208ENST00000455546 MYT1LQ9UL68 1186 aa7.64□□□□□ -1.19
GTF3C3-208ENST00000455546 KIF14Q15058 1648 aa7.63□□□□□ -1.19
GTF3C3-208ENST00000455546 MADDQ8WXG6 1647 aa7.63□□□□□ -1.19
GTF3C3-208ENST00000455546 HSPA2P54652 639 aa7.63□□□□□ -1.19
GTF3C3-208ENST00000455546 HS6ST3Q8IZP7 471 aa7.63□□□□□ -1.19
GTF3C3-208ENST00000455546 RIMS1Q86UR5 1692 aaKnown RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms