RNA–Protein interactions for RNA: ENST00000454704.5

GTF3C2-206, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 1 (best)

Gene GTF3C2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-206ENST00000454704 ARHGEF40Q8TER5 1519 aa15.53■□□□□ 0.08
GTF3C2-206ENST00000454704 MADDQ8WXG6 1647 aa15.52■□□□□ 0.08
GTF3C2-206ENST00000454704 RICTORQ6R327 1708 aa15.51■□□□□ 0.07
GTF3C2-206ENST00000454704 TTC37Q6PGP7 1564 aa15.5■□□□□ 0.07
GTF3C2-206ENST00000454704 FYCO1Q9BQS8 1478 aa15.5■□□□□ 0.07
GTF3C2-206ENST00000454704 ARID4BQ4LE39 1312 aaPredicted RBP15.5■□□□□ 0.07
GTF3C2-206ENST00000454704 CFAP74Q9C0B2 1584 aa15.49■□□□□ 0.07
GTF3C2-206ENST00000454704 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.49■□□□□ 0.07
GTF3C2-206ENST00000454704 LRRC9Q6ZRR7 1453 aa15.49■□□□□ 0.07
GTF3C2-206ENST00000454704 PLEKHD1A6NEE1 506 aa15.49■□□□□ 0.07
GTF3C2-206ENST00000454704 FANCAO15360 1455 aa15.48■□□□□ 0.07
GTF3C2-206ENST00000454704 DENND4BO75064 1496 aaPredicted RBP15.48■□□□□ 0.07
GTF3C2-206ENST00000454704 AKNAQ7Z591 1439 aa15.47■□□□□ 0.07
GTF3C2-206ENST00000454704 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.47■□□□□ 0.07
GTF3C2-206ENST00000454704 KANK4Q5T7N3 995 aaPredicted RBP15.47■□□□□ 0.07
GTF3C2-206ENST00000454704 RIMS1Q86UR5 1692 aaKnown RBP15.47■□□□□ 0.07
GTF3C2-206ENST00000454704 PCF11O94913 1555 aaKnown RBP15.46■□□□□ 0.07
GTF3C2-206ENST00000454704 CDK13Q14004 1512 aaKnown RBP15.46■□□□□ 0.07
GTF3C2-206ENST00000454704 ZMYM4Q5VZL5 1548 aa15.44■□□□□ 0.06
GTF3C2-206ENST00000454704 LMTK3Q96Q04 1460 aa15.44■□□□□ 0.06
GTF3C2-206ENST00000454704 SIGLEC1Q9BZZ2 1709 aa15.43■□□□□ 0.06
GTF3C2-206ENST00000454704 CASKIN1Q8WXD9 1431 aa15.43■□□□□ 0.06
GTF3C2-206ENST00000454704 NEUROD1Q13562 356 aa15.43■□□□□ 0.06
GTF3C2-206ENST00000454704 ZFYVE16Q7Z3T8 1539 aa15.43■□□□□ 0.06
GTF3C2-206ENST00000454704 FMN1Q68DA7 1419 aa15.41■□□□□ 0.06
GTF3C2-206ENST00000454704 YEATS2Q9ULM3 1422 aa15.41■□□□□ 0.06
GTF3C2-206ENST00000454704 HECW1Q76N89 1606 aa15.39■□□□□ 0.05
GTF3C2-206ENST00000454704 POGZQ7Z3K3 1410 aa15.39■□□□□ 0.05
GTF3C2-206ENST00000454704 FBXO41Q8TF61 875 aa15.38■□□□□ 0.05
GTF3C2-206ENST00000454704 PLPPR3Q6T4P5 718 aa15.37■□□□□ 0.05
GTF3C2-206ENST00000454704 SETD5Q9C0A6 1442 aa15.37■□□□□ 0.05
GTF3C2-206ENST00000454704 MAGI2Q86UL8 1455 aa15.37■□□□□ 0.05
GTF3C2-206ENST00000454704 PLCH2O75038 1416 aa15.36■□□□□ 0.05
GTF3C2-206ENST00000454704 SCAPERQ9BY12 1400 aa15.36■□□□□ 0.05
GTF3C2-206ENST00000454704 FER1L4A9Z1Z3 1794 aa15.36■□□□□ 0.05
GTF3C2-206ENST00000454704 MYO5CQ9NQX4 1742 aa15.36■□□□□ 0.05
GTF3C2-206ENST00000454704 KIF14Q15058 1648 aa15.35■□□□□ 0.05
GTF3C2-206ENST00000454704 ATP1B4Q9UN42 357 aaPredicted RBP15.34■□□□□ 0.05
GTF3C2-206ENST00000454704 TIMELESSQ9UNS1 1208 aa15.34■□□□□ 0.05
GTF3C2-206ENST00000454704 MLECQ14165 292 aa15.34■□□□□ 0.05
GTF3C2-206ENST00000454704 HSPA2P54652 639 aa15.33■□□□□ 0.04
GTF3C2-206ENST00000454704 RAB3GAP2Q9H2M9 1393 aa15.32■□□□□ 0.04
GTF3C2-206ENST00000454704 C9orf84Q5VXU9 1444 aa15.3■□□□□ 0.04
GTF3C2-206ENST00000454704 LRRIQ1Q96JM4 1722 aa15.3■□□□□ 0.04
GTF3C2-206ENST00000454704 GTF3C3Q9Y5Q9 886 aa15.29■□□□□ 0.04
GTF3C2-206ENST00000454704 ATP10AO60312 1499 aa15.29■□□□□ 0.04
GTF3C2-206ENST00000454704 ARHGEF12Q9NZN5 1544 aa15.29■□□□□ 0.04
GTF3C2-206ENST00000454704 SUPT6HQ7KZ85 1726 aaKnown RBP15.28■□□□□ 0.04
GTF3C2-206ENST00000454704 ARHGAP5Q13017 1502 aa15.28■□□□□ 0.04
GTF3C2-206ENST00000454704 EHBP1L1Q8N3D4 1523 aa15.28■□□□□ 0.04
GTF3C2-206ENST00000454704 TROQ12816 1431 aaPredicted RBP15.28■□□□□ 0.04
GTF3C2-206ENST00000454704 EFCAB2Q5VUJ9 269 aa15.28■□□□□ 0.04
GTF3C2-206ENST00000454704 MIER1Q8N108 512 aa15.28■□□□□ 0.04
GTF3C2-206ENST00000454704 CDK11AQ9UQ88 783 aaPredicted RBP15.27■□□□□ 0.04
GTF3C2-206ENST00000454704 ZNF518AQ6AHZ1 1483 aa15.27■□□□□ 0.03
GTF3C2-206ENST00000454704 KDM5CP41229 1560 aa15.26■□□□□ 0.03
GTF3C2-206ENST00000454704 CCDC18Q5T9S5 1454 aa15.26■□□□□ 0.03
GTF3C2-206ENST00000454704 PREX1Q8TCU6 1659 aa15.24■□□□□ 0.03
GTF3C2-206ENST00000454704 FGD6Q6ZV73 1430 aa15.23■□□□□ 0.03
GTF3C2-206ENST00000454704 DIP2CQ9Y2E4 1556 aa15.23■□□□□ 0.03
GTF3C2-206ENST00000454704 CDC42BPBQ9Y5S2 1711 aa15.23■□□□□ 0.03
GTF3C2-206ENST00000454704 AFAP1Q8N556 730 aa15.22■□□□□ 0.03
GTF3C2-206ENST00000454704 ABCA6Q8N139 1617 aa15.21■□□□□ 0.03
GTF3C2-206ENST00000454704 CEBPAP49715 358 aaPredicted RBP15.21■□□□□ 0.03
GTF3C2-206ENST00000454704 PREX2Q70Z35 1606 aa15.21■□□□□ 0.02
GTF3C2-206ENST00000454704 ABCC1P33527 1531 aa15.19■□□□□ 0.02
GTF3C2-206ENST00000454704 MYT1LQ9UL68 1186 aa15.19■□□□□ 0.02
GTF3C2-206ENST00000454704 REREQ9P2R6 1566 aa15.19■□□□□ 0.02
GTF3C2-206ENST00000454704 ITSN2Q9NZM3 1697 aa15.19■□□□□ 0.02
GTF3C2-206ENST00000454704 MTUS2Q5JR59 1369 aa15.17■□□□□ 0.02
GTF3C2-206ENST00000454704 GCC2Q8IWJ2 1684 aa15.17■□□□□ 0.02
GTF3C2-206ENST00000454704 PTPN23Q9H3S7 1636 aa15.17■□□□□ 0.02
GTF3C2-206ENST00000454704 HFM1A2PYH4 1435 aa15.17■□□□□ 0.02
GTF3C2-206ENST00000454704 MYOM3Q5VTT5 1437 aa15.17■□□□□ 0.02
GTF3C2-206ENST00000454704 TRAPPC8Q9Y2L5 1435 aa15.17■□□□□ 0.02
GTF3C2-206ENST00000454704 MLH3Q9UHC1 1453 aa15.17■□□□□ 0.02
GTF3C2-206ENST00000454704 CERKQ8TCT0 537 aa15.17■□□□□ 0.02
GTF3C2-206ENST00000454704 CDC42BPAQ5VT25 1732 aa15.15■□□□□ 0.02
GTF3C2-206ENST00000454704 STRCQ7RTU9 1775 aa15.15■□□□□ 0.02
GTF3C2-206ENST00000454704 C3P01024 1663 aa15.15■□□□□ 0.02
GTF3C2-206ENST00000454704 UHRF1BP1Q6BDS2 1440 aa15.15■□□□□ 0.02
GTF3C2-206ENST00000454704 NCOA2Q15596 1464 aa15.14■□□□□ 0.01
GTF3C2-206ENST00000454704 FAM50AQ14320 339 aaKnown RBP15.14■□□□□ 0.01
GTF3C2-206ENST00000454704 TCOF1Q13428 1488 aaKnown RBP15.14■□□□□ 0.01
GTF3C2-206ENST00000454704 KIDINS220Q9ULH0 1771 aa15.13■□□□□ 0.01
GTF3C2-206ENST00000454704 AGLP35573 1532 aa15.13■□□□□ 0.01
GTF3C2-206ENST00000454704 SETD1BQ9UPS6 1966 aaKnown RBP15.12■□□□□ 0.01
GTF3C2-206ENST00000454704 ITGAEP38570 1179 aa15.12■□□□□ 0.01
GTF3C2-206ENST00000454704 SAMD9LQ8IVG5 1584 aa15.09■□□□□ 0.01
GTF3C2-206ENST00000454704 YTHDC1Q96MU7 727 aaKnown RBP15.09■□□□□ 0.01
GTF3C2-206ENST00000454704 MIA2Q96PC5 1412 aa15.09■□□□□ 0.01
GTF3C2-206ENST00000454704 SYCP2Q9BX26 1530 aa15.09■□□□□ 0.01
GTF3C2-206ENST00000454704 ESF1Q9H501 851 aaKnown RBP15.09■□□□□ 0.01
GTF3C2-206ENST00000454704 ZNF777Q9ULD5 760 aaPredicted RBP15.07■□□□□ 0
GTF3C2-206ENST00000454704 DMRT2Q9Y5R5 561 aa15.07■□□□□ 0
GTF3C2-206ENST00000454704 CNTLNQ9NXG0 1405 aa15.06■□□□□ 0
GTF3C2-206ENST00000454704 GPATCH8Q9UKJ3 1502 aaKnown RBP15.06■□□□□ 0
GTF3C2-206ENST00000454704 NAIPQ13075 1403 aa15.04■□□□□ -0
GTF3C2-206ENST00000454704 PTPRTO14522 1441 aa15.03■□□□□ -0
GTF3C2-206ENST00000454704 MROH2AA6NES4 1674 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 206.9 ms