RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 GPATCH8Q9UKJ3 1502 aaKnown RBP8.25□□□□□ -1.09
RIF1-207ENST00000454583 DENND4BO75064 1496 aaPredicted RBP8.25□□□□□ -1.09
RIF1-207ENST00000454583 WDR7Q9Y4E6 1490 aa8.25□□□□□ -1.09
RIF1-207ENST00000454583 RNF17Q9BXT8 1623 aaKnown RBP8.25□□□□□ -1.09
RIF1-207ENST00000454583 UNC13BO14795 1591 aa8.25□□□□□ -1.09
RIF1-207ENST00000454583 ADGRL2O95490 1459 aa8.24□□□□□ -1.09
RIF1-207ENST00000454583 CARMIL2Q6F5E8 1435 aa8.24□□□□□ -1.09
RIF1-207ENST00000454583 EIF2AK4Q9P2K8 1649 aaKnown RBP8.24□□□□□ -1.09
RIF1-207ENST00000454583 NCOA2Q15596 1464 aa8.24□□□□□ -1.09
RIF1-207ENST00000454583 TROQ12816 1431 aaPredicted RBP8.24□□□□□ -1.09
RIF1-207ENST00000454583 SHANK2Q9UPX8 1470 aa8.23□□□□□ -1.09
RIF1-207ENST00000454583 KDM5DQ9BY66 1539 aa8.23□□□□□ -1.09
RIF1-207ENST00000454583 ABCA6Q8N139 1617 aa8.22□□□□□ -1.09
RIF1-207ENST00000454583 ZFYVE16Q7Z3T8 1539 aa8.22□□□□□ -1.09
RIF1-207ENST00000454583 PHLDB1Q86UU1 1377 aa8.22□□□□□ -1.09
RIF1-207ENST00000454583 PTPRKQ15262 1439 aa8.21□□□□□ -1.1
RIF1-207ENST00000454583 AKNAQ7Z591 1439 aa8.2□□□□□ -1.1
RIF1-207ENST00000454583 MIA2Q96PC5 1412 aa8.2□□□□□ -1.1
RIF1-207ENST00000454583 CHMP7Q8WUX9 453 aaPredicted RBP8.19□□□□□ -1.1
RIF1-207ENST00000454583 PTPRGP23470 1445 aa8.19□□□□□ -1.1
RIF1-207ENST00000454583 IFT172Q9UG01 1749 aa8.18□□□□□ -1.1
RIF1-207ENST00000454583 ASXL2Q76L83 1435 aa8.18□□□□□ -1.1
RIF1-207ENST00000454583 OSCARQ8IYS5 282 aa8.17□□□□□ -1.1
RIF1-207ENST00000454583 KANK4Q5T7N3 995 aaPredicted RBP8.17□□□□□ -1.1
RIF1-207ENST00000454583 CAMSAP2Q08AD1 1489 aa8.17□□□□□ -1.1
RIF1-207ENST00000454583 MYOM3Q5VTT5 1437 aa8.17□□□□□ -1.1
RIF1-207ENST00000454583 IQGAP3Q86VI3 1631 aa8.17□□□□□ -1.1
RIF1-207ENST00000454583 DIP2CQ9Y2E4 1556 aa8.17□□□□□ -1.1
RIF1-207ENST00000454583 MSH5O43196 834 aa8.16□□□□□ -1.1
RIF1-207ENST00000454583 PLCH2O75038 1416 aa8.16□□□□□ -1.1
RIF1-207ENST00000454583 FGD6Q6ZV73 1430 aa8.15□□□□□ -1.1
RIF1-207ENST00000454583 FAM9AQ8IZU1 332 aaPredicted RBP8.15□□□□□ -1.1
RIF1-207ENST00000454583 PIAS4Q8N2W9 510 aaPredicted RBP8.15□□□□□ -1.1
RIF1-207ENST00000454583 KIAA1107Q9UPP5 1409 aa8.14□□□□□ -1.11
RIF1-207ENST00000454583 ZC3H13Q5T200 1668 aaKnown RBP8.14□□□□□ -1.11
RIF1-207ENST00000454583 PRDM15P57071 1507 aaPredicted RBP8.14□□□□□ -1.11
RIF1-207ENST00000454583 PIK3C2BO00750 1634 aa8.14□□□□□ -1.11
RIF1-207ENST00000454583 MROH2AA6NES4 1674 aa8.14□□□□□ -1.11
RIF1-207ENST00000454583 HECW2Q9P2P5 1572 aa8.14□□□□□ -1.11
RIF1-207ENST00000454583 NEURL4Q96JN8 1562 aa8.13□□□□□ -1.11
RIF1-207ENST00000454583 SYCP2Q9BX26 1530 aa8.13□□□□□ -1.11
RIF1-207ENST00000454583 NEO1Q92859 1461 aa8.13□□□□□ -1.11
RIF1-207ENST00000454583 ARHGEF40Q8TER5 1519 aa8.13□□□□□ -1.11
RIF1-207ENST00000454583 COL17A1Q9UMD9 1497 aaPredicted RBP8.11□□□□□ -1.11
RIF1-207ENST00000454583 ABCC5O15440 1437 aa8.11□□□□□ -1.11
RIF1-207ENST00000454583 TSPOAP1O95153 1857 aa8.1□□□□□ -1.11
RIF1-207ENST00000454583 E9PCH4 1651 aa8.1□□□□□ -1.11
RIF1-207ENST00000454583 KDM5AP29375 1690 aaKnown RBP8.1□□□□□ -1.11
RIF1-207ENST00000454583 LMTK2Q8IWU2 1503 aa8.1□□□□□ -1.11
RIF1-207ENST00000454583 DNAJC5Q9H3Z4 198 aa8.1□□□□□ -1.11
RIF1-207ENST00000454583 FAM135AQ9P2D6 1515 aa8.1□□□□□ -1.11
RIF1-207ENST00000454583 ZNF518AQ6AHZ1 1483 aa8.09□□□□□ -1.11
RIF1-207ENST00000454583 CEP152O94986 1710 aa8.09□□□□□ -1.11
RIF1-207ENST00000454583 MLH3Q9UHC1 1453 aa8.09□□□□□ -1.11
RIF1-207ENST00000454583 DAPK1P53355 1430 aa8.09□□□□□ -1.11
RIF1-207ENST00000454583 SETD1AO15047 1707 aaKnown RBP8.08□□□□□ -1.12
RIF1-207ENST00000454583 ADAMTSL3P82987 1691 aa8.08□□□□□ -1.12
RIF1-207ENST00000454583 AGLP35573 1532 aa8.08□□□□□ -1.12
RIF1-207ENST00000454583 ROCK1Q13464 1354 aa8.07□□□□□ -1.12
RIF1-207ENST00000454583 POGZQ7Z3K3 1410 aa8.07□□□□□ -1.12
RIF1-207ENST00000454583 ATP7AQ04656 1500 aa8.07□□□□□ -1.12
RIF1-207ENST00000454583 RTEL1-TNFRSF6BF6WH68 1400 aa8.07□□□□□ -1.12
RIF1-207ENST00000454583 TET3O43151 1660 aa8.06□□□□□ -1.12
RIF1-207ENST00000454583 HFM1A2PYH4 1435 aa8.06□□□□□ -1.12
RIF1-207ENST00000454583 CAMSAP1Q5T5Y3 1602 aa8.06□□□□□ -1.12
RIF1-207ENST00000454583 SPHKAPQ2M3C7 1700 aa8.05□□□□□ -1.12
RIF1-207ENST00000454583 NAIPQ13075 1403 aa8.04□□□□□ -1.12
RIF1-207ENST00000454583 ZNF142P52746 1687 aaPredicted RBP8.04□□□□□ -1.12
RIF1-207ENST00000454583 UBTFP17480 764 aaKnown RBP8.03□□□□□ -1.12
RIF1-207ENST00000454583 PZPP20742 1482 aa8.03□□□□□ -1.12
RIF1-207ENST00000454583 CCDC141Q6ZP82 1450 aa8.03□□□□□ -1.12
RIF1-207ENST00000454583 TRAPPC8Q9Y2L5 1435 aa8.03□□□□□ -1.12
RIF1-207ENST00000454583 FANCAO15360 1455 aa8.02□□□□□ -1.12
RIF1-207ENST00000454583 ATP10AO60312 1499 aa8.02□□□□□ -1.13
RIF1-207ENST00000454583 PLEKHH2Q8IVE3 1493 aa8.02□□□□□ -1.13
RIF1-207ENST00000454583 PPP4R3CPQ6ZMV5 832 aa8.02□□□□□ -1.13
RIF1-207ENST00000454583 DUOX2Q9NRD8 1548 aa8.02□□□□□ -1.13
RIF1-207ENST00000454583 PREX1Q8TCU6 1659 aa8.01□□□□□ -1.13
RIF1-207ENST00000454583 MYO5BQ9ULV0 1848 aa8.01□□□□□ -1.13
RIF1-207ENST00000454583 NCOA1Q15788 1441 aa8.01□□□□□ -1.13
RIF1-207ENST00000454583 POLR1AO95602 1720 aaPredicted RBP8□□□□□ -1.13
RIF1-207ENST00000454583 CCNB3Q8WWL7 1395 aa8□□□□□ -1.13
RIF1-207ENST00000454583 C3P01024 1663 aa8□□□□□ -1.13
RIF1-207ENST00000454583 SYNMO15061 1565 aa8□□□□□ -1.13
RIF1-207ENST00000454583 ARHGAP5Q13017 1502 aa8□□□□□ -1.13
RIF1-207ENST00000454583 ERBINQ96RT1 1412 aa7.99□□□□□ -1.13
RIF1-207ENST00000454583 PPLO60437 1756 aa7.99□□□□□ -1.13
RIF1-207ENST00000454583 EFCAB6Q5THR3 1501 aa7.99□□□□□ -1.13
RIF1-207ENST00000454583 FER1L4A9Z1Z3 1794 aa7.99□□□□□ -1.13
RIF1-207ENST00000454583 MADDQ8WXG6 1647 aa7.97□□□□□ -1.13
RIF1-207ENST00000454583 P3H3Q8IVL6 736 aa7.97□□□□□ -1.13
RIF1-207ENST00000454583 CLTCQ00610 1675 aaKnown RBP7.96□□□□□ -1.13
RIF1-207ENST00000454583 SPATA31D1Q6ZQQ2 1576 aa7.96□□□□□ -1.14
RIF1-207ENST00000454583 LAMC1P11047 1609 aa7.96□□□□□ -1.14
RIF1-207ENST00000454583 FBLN2P98095 1184 aa7.96□□□□□ -1.14
RIF1-207ENST00000454583 KIAA1210Q9ULL0 1709 aa7.96□□□□□ -1.14
RIF1-207ENST00000454583 NRXN3Q9Y4C0 1643 aa7.96□□□□□ -1.14
RIF1-207ENST00000454583 ADGRL1O94910 1474 aa7.95□□□□□ -1.14
RIF1-207ENST00000454583 TEX14Q8IWB6 1497 aa7.95□□□□□ -1.14
RIF1-207ENST00000454583 CLTCL1P53675 1640 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms