RNA–Protein interactions for RNA: ENST00000454402.6

RFC5-204, Transcript of replication factor C subunit 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC5, Length 1,655 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-204ENST00000454402 CDC42BPBQ9Y5S2 1711 aa24.49■■□□□ 1.51
RFC5-204ENST00000454402 ARAP3Q8WWN8 1544 aa24.49■■□□□ 1.51
RFC5-204ENST00000454402 PREX2Q70Z35 1606 aa24.49■■□□□ 1.51
RFC5-204ENST00000454402 PHLDB1Q86UU1 1377 aa24.49■■□□□ 1.51
RFC5-204ENST00000454402 CDC42BPAQ5VT25 1732 aa24.49■■□□□ 1.51
RFC5-204ENST00000454402 ADGRL1O94910 1474 aa24.48■■□□□ 1.51
RFC5-204ENST00000454402 GPATCH8Q9UKJ3 1502 aaKnown RBP24.47■■□□□ 1.51
RFC5-204ENST00000454402 SUPT6HQ7KZ85 1726 aaKnown RBP24.47■■□□□ 1.51
RFC5-204ENST00000454402 CFDP1Q9UEE9 299 aaPredicted RBP24.46■■□□□ 1.51
RFC5-204ENST00000454402 SCAPERQ9BY12 1400 aa24.46■■□□□ 1.51
RFC5-204ENST00000454402 NCOA2Q15596 1464 aa24.46■■□□□ 1.51
RFC5-204ENST00000454402 MAP3K1Q13233 1512 aa24.46■■□□□ 1.51
RFC5-204ENST00000454402 DENND4BO75064 1496 aaPredicted RBP24.45■■□□□ 1.5
RFC5-204ENST00000454402 PPARGC1BQ86YN6 1023 aaKnown RBP24.43■■□□□ 1.5
RFC5-204ENST00000454402 FRMPD1Q5SYB0 1578 aa24.4■■□□□ 1.5
RFC5-204ENST00000454402 MYT1LQ9UL68 1186 aa24.4■■□□□ 1.5
RFC5-204ENST00000454402 ZNF644Q9H582 1327 aaPredicted RBP24.38■■□□□ 1.49
RFC5-204ENST00000454402 AFAP1Q8N556 730 aa24.37■■□□□ 1.49
RFC5-204ENST00000454402 ITSN2Q9NZM3 1697 aa24.36■■□□□ 1.49
RFC5-204ENST00000454402 RICTORQ6R327 1708 aa24.36■■□□□ 1.49
RFC5-204ENST00000454402 SAMD9LQ8IVG5 1584 aa24.36■■□□□ 1.49
RFC5-204ENST00000454402 HNRNPMP52272 730 aaKnown RBP eCLIP24.36■■□□□ 1.49
RFC5-204ENST00000454402 POGZQ7Z3K3 1410 aa24.36■■□□□ 1.49
RFC5-204ENST00000454402 ABCC1P33527 1531 aa24.34■■□□□ 1.49
RFC5-204ENST00000454402 ARHGEF12Q9NZN5 1544 aa24.34■■□□□ 1.49
RFC5-204ENST00000454402 SYCP2Q9BX26 1530 aa24.32■■□□□ 1.48
RFC5-204ENST00000454402 TRAPPC8Q9Y2L5 1435 aa24.31■■□□□ 1.48
RFC5-204ENST00000454402 ZNF518AQ6AHZ1 1483 aa24.29■■□□□ 1.48
RFC5-204ENST00000454402 YEATS2Q9ULM3 1422 aa24.27■■□□□ 1.48
RFC5-204ENST00000454402 CAMSAP2Q08AD1 1489 aa24.26■■□□□ 1.47
RFC5-204ENST00000454402 MYOM3Q5VTT5 1437 aa24.26■■□□□ 1.47
RFC5-204ENST00000454402 ZFYVE16Q7Z3T8 1539 aa24.25■■□□□ 1.47
RFC5-204ENST00000454402 ARID4BQ4LE39 1312 aaPredicted RBP24.24■■□□□ 1.47
RFC5-204ENST00000454402 ZMYM4Q5VZL5 1548 aa24.24■■□□□ 1.47
RFC5-204ENST00000454402 PLEKHH2Q8IVE3 1493 aa24.24■■□□□ 1.47
RFC5-204ENST00000454402 ARHGEF40Q8TER5 1519 aa24.22■■□□□ 1.47
RFC5-204ENST00000454402 KIAA1107Q9UPP5 1409 aa24.21■■□□□ 1.47
RFC5-204ENST00000454402 SPAG9O60271 1321 aaKnown RBP24.2■■□□□ 1.46
RFC5-204ENST00000454402 KDM5CP41229 1560 aa24.2■■□□□ 1.46
RFC5-204ENST00000454402 HECW2Q9P2P5 1572 aa24.19■■□□□ 1.46
RFC5-204ENST00000454402 MAGI2Q86UL8 1455 aa24.18■■□□□ 1.46
RFC5-204ENST00000454402 MBD5Q9P267 1494 aa24.16■■□□□ 1.46
RFC5-204ENST00000454402 MIA2Q96PC5 1412 aa24.16■■□□□ 1.46
RFC5-204ENST00000454402 FGD6Q6ZV73 1430 aa24.14■■□□□ 1.46
RFC5-204ENST00000454402 KDM4FA0A1W2PPD8 638 aa24.14■■□□□ 1.45
RFC5-204ENST00000454402 MLECQ14165 292 aa24.14■■□□□ 1.45
RFC5-204ENST00000454402 FAM50AQ14320 339 aaKnown RBP24.14■■□□□ 1.45
RFC5-204ENST00000454402 PTPN23Q9H3S7 1636 aa24.13■■□□□ 1.45
RFC5-204ENST00000454402 MLH3Q9UHC1 1453 aa24.13■■□□□ 1.45
RFC5-204ENST00000454402 ABCA6Q8N139 1617 aa24.12■■□□□ 1.45
RFC5-204ENST00000454402 ATP10AO60312 1499 aa24.12■■□□□ 1.45
RFC5-204ENST00000454402 CCDC141Q6ZP82 1450 aa24.12■■□□□ 1.45
RFC5-204ENST00000454402 KIDINS220Q9ULH0 1771 aa24.11■■□□□ 1.45
RFC5-204ENST00000454402 DIP2CQ9Y2E4 1556 aa24.11■■□□□ 1.45
RFC5-204ENST00000454402 ATP7AQ04656 1500 aa24.1■■□□□ 1.45
RFC5-204ENST00000454402 AEBP2Q6ZN18 517 aaPredicted RBP24.1■■□□□ 1.45
RFC5-204ENST00000454402 C9orf84Q5VXU9 1444 aa24.1■■□□□ 1.45
RFC5-204ENST00000454402 SIGLEC1Q9BZZ2 1709 aa24.09■■□□□ 1.45
RFC5-204ENST00000454402 TSPY4P0CV99 314 aa24.08■■□□□ 1.45
RFC5-204ENST00000454402 TSPY10P0CW01 314 aa24.08■■□□□ 1.45
RFC5-204ENST00000454402 INO80Q9ULG1 1556 aaPredicted RBP24.06■■□□□ 1.44
RFC5-204ENST00000454402 RSPH4AQ5TD94 716 aa24.05■■□□□ 1.44
RFC5-204ENST00000454402 ARHGEF5Q12774 1597 aa24.05■■□□□ 1.44
RFC5-204ENST00000454402 TCOF1Q13428 1488 aaKnown RBP24.02■■□□□ 1.44
RFC5-204ENST00000454402 PLPPR3Q6T4P5 718 aa24.02■■□□□ 1.44
RFC5-204ENST00000454402 CHIC2Q9UKJ5 165 aa24.02■■□□□ 1.44
RFC5-204ENST00000454402 ITGAEP38570 1179 aa24.01■■□□□ 1.43
RFC5-204ENST00000454402 ABCC5O15440 1437 aa23.99■■□□□ 1.43
RFC5-204ENST00000454402 BCORL1Q5H9F3 1711 aa23.98■■□□□ 1.43
RFC5-204ENST00000454402 RTEL1-TNFRSF6BF6WH68 1400 aa23.98■■□□□ 1.43
RFC5-204ENST00000454402 DAPK1P53355 1430 aa23.98■■□□□ 1.43
RFC5-204ENST00000454402 A2MP01023 1474 aa23.98■■□□□ 1.43
RFC5-204ENST00000454402 DNMT1P26358 1616 aaKnown RBP23.95■■□□□ 1.42
RFC5-204ENST00000454402 MADDQ8WXG6 1647 aa23.94■■□□□ 1.42
RFC5-204ENST00000454402 RRP7BPQ9NSQ0 103 aa23.93■■□□□ 1.42
RFC5-204ENST00000454402 CROCC2H7BZ55 1655 aa23.93■■□□□ 1.42
RFC5-204ENST00000454402 REREQ9P2R6 1566 aa23.93■■□□□ 1.42
RFC5-204ENST00000454402 ADGBQ8N7X0 1667 aa23.92■■□□□ 1.42
RFC5-204ENST00000454402 ADAMTSL3P82987 1691 aa23.92■■□□□ 1.42
RFC5-204ENST00000454402 GGT6Q6P531 493 aa23.92■■□□□ 1.42
RFC5-204ENST00000454402 MAST1Q9Y2H9 1570 aa23.91■■□□□ 1.42
RFC5-204ENST00000454402 DHX29Q7Z478 1369 aaKnown RBP23.89■■□□□ 1.42
RFC5-204ENST00000454402 RIMS1Q86UR5 1692 aaKnown RBP23.89■■□□□ 1.41
RFC5-204ENST00000454402 ESF1Q9H501 851 aaKnown RBP23.89■■□□□ 1.41
RFC5-204ENST00000454402 KIF3BO15066 747 aa23.88■■□□□ 1.41
RFC5-204ENST00000454402 SHANK2Q9UPX8 1470 aa23.88■■□□□ 1.41
RFC5-204ENST00000454402 AGLP35573 1532 aa23.88■■□□□ 1.41
RFC5-204ENST00000454402 PLXNC1O60486 1568 aa23.88■■□□□ 1.41
RFC5-204ENST00000454402 KIF15Q9NS87 1388 aa23.86■■□□□ 1.41
RFC5-204ENST00000454402 FER1L4A9Z1Z3 1794 aa23.86■■□□□ 1.41
RFC5-204ENST00000454402 PTPRMP28827 1452 aa23.84■■□□□ 1.41
RFC5-204ENST00000454402 ANKRD30AQ9BXX3 1397 aa23.84■■□□□ 1.41
RFC5-204ENST00000454402 PTPRKQ15262 1439 aa23.83■■□□□ 1.41
RFC5-204ENST00000454402 RRBP1Q9P2E9 1410 aaKnown RBP23.82■■□□□ 1.4
RFC5-204ENST00000454402 CEBPAP49715 358 aaPredicted RBP23.81■■□□□ 1.4
RFC5-204ENST00000454402 DUOX2Q9NRD8 1548 aa23.79■■□□□ 1.4
RFC5-204ENST00000454402 NCOA1Q15788 1441 aa23.78■■□□□ 1.4
RFC5-204ENST00000454402 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.76■■□□□ 1.39
RFC5-204ENST00000454402 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.76■■□□□ 1.397e-7■■□□□ 12.5
RFC5-204ENST00000454402 ADGRL2O95490 1459 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms