RNA–Protein interactions for RNA: ENST00000454402.6

RFC5-204, Transcript of replication factor C subunit 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC5, Length 1,655 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-204ENST00000454402 NISCHQ9Y2I1 1504 aa37.55■■■■□ 3.6
RFC5-204ENST00000454402 CCDC180Q9P1Z9 1646 aa33.24■■■□□ 2.91
RFC5-204ENST00000454402 ABCC9O60706 1549 aa32.64■■■□□ 2.81
RFC5-204ENST00000454402 DCAF8L2P0C7V8 631 aa31.63■■■□□ 2.65
RFC5-204ENST00000454402 RB1CC1Q8TDY2 1594 aa31.3■■■□□ 2.6
RFC5-204ENST00000454402 ZCCHC6Q5VYS8 1495 aaKnown RBP31.29■■■□□ 2.6
RFC5-204ENST00000454402 NACADO15069 1562 aa31.24■■■□□ 2.59
RFC5-204ENST00000454402 MYO15BQ96JP2 1530 aa30.98■■■□□ 2.55
RFC5-204ENST00000454402 DCAF1Q9Y4B6 1507 aa30.94■■■□□ 2.54
RFC5-204ENST00000454402 UNC13AQ9UPW8 1703 aa30.6■■■□□ 2.49
RFC5-204ENST00000454402 PABPN1Q86U42 306 aaKnown RBP eCLIP30.58■■■□□ 2.49
RFC5-204ENST00000454402 SCRIBQ14160 1630 aa30.56■■■□□ 2.48
RFC5-204ENST00000454402 BICRAQ9NZM4 1560 aa30.34■■■□□ 2.45
RFC5-204ENST00000454402 SHROOM4Q9ULL8 1493 aa30.03■■■□□ 2.4
RFC5-204ENST00000454402 DNAJC5BQ9UF47 199 aa29.82■■■□□ 2.36
RFC5-204ENST00000454402 EIF4G1Q04637 1599 aaKnown RBP29.56■■■□□ 2.32
RFC5-204ENST00000454402 CC2D2AQ9P2K1 1620 aa29.43■■■□□ 2.3
RFC5-204ENST00000454402 CECR2Q9BXF3 1484 aa29.33■■■□□ 2.29
RFC5-204ENST00000454402 SMARCA4P51532 1647 aa29.12■■■□□ 2.25
RFC5-204ENST00000454402 BAZ1AQ9NRL2 1556 aaPredicted RBP29.08■■■□□ 2.25
RFC5-204ENST00000454402 MROH2BQ7Z745 1585 aa29■■■□□ 2.23
RFC5-204ENST00000454402 ATAD2BQ9ULI0 1458 aa28.93■■■□□ 2.22
RFC5-204ENST00000454402 SMARCA2P51531 1590 aa28.86■■■□□ 2.21
RFC5-204ENST00000454402 NCAPD3P42695 1498 aa28.83■■■□□ 2.21
RFC5-204ENST00000454402 BAZ1BQ9UIG0 1483 aaKnown RBP28.75■■■□□ 2.19
RFC5-204ENST00000454402 WIZO95785 1651 aa28.73■■■□□ 2.19
RFC5-204ENST00000454402 PEG3Q9GZU2 1588 aa28.72■■■□□ 2.19
RFC5-204ENST00000454402 HMGXB3Q12766 1538 aa28.7■■■□□ 2.18
RFC5-204ENST00000454402 RSF1Q96T23 1441 aaPredicted RBP28.69■■■□□ 2.18
RFC5-204ENST00000454402 TOP2AP11388 1531 aaKnown RBP28.35■■■□□ 2.13
RFC5-204ENST00000454402 SUPT5HO00267 1087 aaKnown RBP28.3■■■□□ 2.12
RFC5-204ENST00000454402 NESP48681 1621 aa28.27■■■□□ 2.12
RFC5-204ENST00000454402 ERCC6Q03468 1493 aa28.11■■■□□ 2.09
RFC5-204ENST00000454402 CCDC88BA6NC98 1476 aa28.07■■■□□ 2.08
RFC5-204ENST00000454402 LAMC3Q9Y6N6 1575 aa28.07■■■□□ 2.08
RFC5-204ENST00000454402 CADPSQ9ULU8 1353 aa28.06■■■□□ 2.08
RFC5-204ENST00000454402 PDS5BQ9NTI5 1447 aa27.92■■■□□ 2.06
RFC5-204ENST00000454402 CFTRP13569 1480 aa27.89■■■□□ 2.06
RFC5-204ENST00000454402 KIF21AQ7Z4S6 1674 aa27.88■■■□□ 2.05
RFC5-204ENST00000454402 FANCD2Q9BXW9 1451 aa27.78■■■□□ 2.04
RFC5-204ENST00000454402 CEP164Q9UPV0 1460 aa27.73■■■□□ 2.03
RFC5-204ENST00000454402 THOC2Q8NI27 1593 aaKnown RBP27.69■■■□□ 2.02
RFC5-204ENST00000454402 PRDM2Q13029 1718 aa27.65■■■□□ 2.02
RFC5-204ENST00000454402 MRC2Q9UBG0 1479 aa27.64■■■□□ 2.01
RFC5-204ENST00000454402 CUX2O14529 1486 aa27.6■■■□□ 2.01
RFC5-204ENST00000454402 WDR62O43379 1518 aa27.5■■□□□ 1.99
RFC5-204ENST00000454402 URB2Q14146 1524 aaKnown RBP27.49■■□□□ 1.99
RFC5-204ENST00000454402 TOPBP1Q92547 1522 aa27.33■■□□□ 1.97
RFC5-204ENST00000454402 DNMBPQ6XZF7 1577 aa27.29■■□□□ 1.96
RFC5-204ENST00000454402 ABCC8Q09428 1581 aa27.25■■□□□ 1.95
RFC5-204ENST00000454402 CUX1P39880 1505 aa27.19■■□□□ 1.94
RFC5-204ENST00000454402 POLA1P09884 1462 aaPredicted RBP27.12■■□□□ 1.93
RFC5-204ENST00000454402 FGD5Q6ZNL6 1462 aa27.1■■□□□ 1.93
RFC5-204ENST00000454402 IFT140Q96RY7 1462 aa27.1■■□□□ 1.93
RFC5-204ENST00000454402 RAD54L2Q9Y4B4 1467 aa27.08■■□□□ 1.92
RFC5-204ENST00000454402 WRNQ14191 1432 aaPredicted RBP eCLIP27.07■■□□□ 1.92
RFC5-204ENST00000454402 ZNF608Q9ULD9 1512 aaPredicted RBP27.05■■□□□ 1.92
RFC5-204ENST00000454402 SOGA1O94964 1423 aa27.04■■□□□ 1.92
RFC5-204ENST00000454402 SYNJ1O43426 1573 aa27.01■■□□□ 1.92
RFC5-204ENST00000454402 TARBP1Q13395 1621 aaKnown RBP26.98■■□□□ 1.91
RFC5-204ENST00000454402 TOP2BQ02880 1626 aa26.95■■□□□ 1.9
RFC5-204ENST00000454402 AQRO60306 1485 aaKnown RBP eCLIP26.94■■□□□ 1.92e-6■■■□□ 15.6
RFC5-204ENST00000454402 TDRD9Q8NDG6 1382 aaKnown RBP26.93■■□□□ 1.9
RFC5-204ENST00000454402 BIVM-ERCC5R4GMW8 1640 aa26.92■■□□□ 1.9
RFC5-204ENST00000454402 EIF4G3O43432 1585 aaKnown RBP26.92■■□□□ 1.9
RFC5-204ENST00000454402 WDR97A6NE52 1622 aa26.78■■□□□ 1.88
RFC5-204ENST00000454402 ABCA10Q8WWZ4 1543 aa26.77■■□□□ 1.88
RFC5-204ENST00000454402 FBLN2P98095 1184 aa26.71■■□□□ 1.87
RFC5-204ENST00000454402 GAPVD1Q14C86 1478 aa26.71■■□□□ 1.87
RFC5-204ENST00000454402 DNAJC5Q9H3Z4 198 aa26.67■■□□□ 1.86
RFC5-204ENST00000454402 SNAPC4Q5SXM2 1469 aa26.67■■□□□ 1.86
RFC5-204ENST00000454402 GRIN2BQ13224 1484 aa26.66■■□□□ 1.86
RFC5-204ENST00000454402 ABCA5Q8WWZ7 1642 aa26.65■■□□□ 1.86
RFC5-204ENST00000454402 PBRM1Q86U86 1689 aa26.64■■□□□ 1.85
RFC5-204ENST00000454402 TRIM41Q8WV44 630 aa26.63■■□□□ 1.85
RFC5-204ENST00000454402 OSCARQ8IYS5 282 aa26.59■■□□□ 1.85
RFC5-204ENST00000454402 CHMP7Q8WUX9 453 aaPredicted RBP26.56■■□□□ 1.84
RFC5-204ENST00000454402 CHD1O14646 1710 aa26.56■■□□□ 1.84
RFC5-204ENST00000454402 MAGI1Q96QZ7 1491 aaPredicted RBP26.54■■□□□ 1.84
RFC5-204ENST00000454402 KIF27Q86VH2 1401 aa26.49■■□□□ 1.83
RFC5-204ENST00000454402 SYNJ2O15056 1496 aa26.46■■□□□ 1.83
RFC5-204ENST00000454402 ERICH3Q5RHP9 1530 aa26.44■■□□□ 1.82
RFC5-204ENST00000454402 ADAMTS12P58397 1594 aa26.42■■□□□ 1.82
RFC5-204ENST00000454402 RUSC2Q8N2Y8 1516 aa26.38■■□□□ 1.81
RFC5-204ENST00000454402 FHAD1B1AJZ9 1412 aa26.37■■□□□ 1.81
RFC5-204ENST00000454402 CHIC1Q5VXU3 224 aa26.36■■□□□ 1.81
RFC5-204ENST00000454402 IGF1RP08069 1367 aa26.36■■□□□ 1.81
RFC5-204ENST00000454402 GRIN2AQ12879 1464 aa26.33■■□□□ 1.8
RFC5-204ENST00000454402 CUL7Q14999 1698 aa26.24■■□□□ 1.79
RFC5-204ENST00000454402 CARMIL1Q5VZK9 1371 aa26.23■■□□□ 1.79
RFC5-204ENST00000454402 FAM9AQ8IZU1 332 aaPredicted RBP26.22■■□□□ 1.79
RFC5-204ENST00000454402 CEP170Q5SW79 1584 aa26.21■■□□□ 1.79
RFC5-204ENST00000454402 CLASP1Q7Z460 1538 aa26.2■■□□□ 1.78
RFC5-204ENST00000454402 NUP160Q12769 1436 aa26.15■■□□□ 1.78
RFC5-204ENST00000454402 RIMBP3CA6NJZ7 1639 aa26.14■■□□□ 1.78
RFC5-204ENST00000454402 RIMBP3BA6NNM3 1639 aa26.14■■□□□ 1.78
RFC5-204ENST00000454402 RIMBP3Q9UFD9 1639 aa26.14■■□□□ 1.78
RFC5-204ENST00000454402 ARHGEF11O15085 1522 aa26.14■■□□□ 1.77
RFC5-204ENST00000454402 RAPGEF2Q9Y4G8 1499 aa26.07■■□□□ 1.76
RFC5-204ENST00000454402 CSRNP3Q8WYN3 585 aa26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms