RNA–Protein interactions for RNA: ENST00000453992.5

NCL-205, Transcript of nucleolin, humanhuman

TSL 4

Gene NCL, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-205ENST00000453992 NCOA2Q15596 1464 aa30.25■■■□□ 2.43
NCL-205ENST00000453992 ARHGAP5Q13017 1502 aa30.23■■■□□ 2.43
NCL-205ENST00000453992 GPATCH8Q9UKJ3 1502 aaKnown RBP30.22■■■□□ 2.43
NCL-205ENST00000453992 KANK4Q5T7N3 995 aaPredicted RBP30.22■■■□□ 2.43
NCL-205ENST00000453992 CCNB3Q8WWL7 1395 aa30.2■■■□□ 2.43
NCL-205ENST00000453992 AKNAQ7Z591 1439 aa30.17■■■□□ 2.42
NCL-205ENST00000453992 COL17A1Q9UMD9 1497 aaPredicted RBP30.17■■■□□ 2.42
NCL-205ENST00000453992 EFCAB2Q5VUJ9 269 aa30.16■■■□□ 2.42
NCL-205ENST00000453992 ADGRL1O94910 1474 aa30.12■■■□□ 2.41
NCL-205ENST00000453992 ABCC1P33527 1531 aa30.09■■■□□ 2.41
NCL-205ENST00000453992 RICTORQ6R327 1708 aa30.08■■■□□ 2.41
NCL-205ENST00000453992 SAMD9LQ8IVG5 1584 aa30.08■■■□□ 2.41
NCL-205ENST00000453992 CFDP1Q9UEE9 299 aaPredicted RBP30.06■■■□□ 2.4
NCL-205ENST00000453992 FRMPD1Q5SYB0 1578 aa30.06■■■□□ 2.4
NCL-205ENST00000453992 DENND4BO75064 1496 aaPredicted RBP30.06■■■□□ 2.4
NCL-205ENST00000453992 MYOM3Q5VTT5 1437 aa30.05■■■□□ 2.4
NCL-205ENST00000453992 PLEKHH2Q8IVE3 1493 aa30.04■■■□□ 2.4
NCL-205ENST00000453992 SCAPERQ9BY12 1400 aa30.03■■■□□ 2.4
NCL-205ENST00000453992 POGZQ7Z3K3 1410 aa30.02■■■□□ 2.4
NCL-205ENST00000453992 MIA2Q96PC5 1412 aa30■■■□□ 2.39
NCL-205ENST00000453992 KIAA1107Q9UPP5 1409 aa29.98■■■□□ 2.39
NCL-205ENST00000453992 ZMYM4Q5VZL5 1548 aa29.98■■■□□ 2.39
NCL-205ENST00000453992 SYCP2Q9BX26 1530 aa29.97■■■□□ 2.39
NCL-205ENST00000453992 ZNF518AQ6AHZ1 1483 aa29.97■■■□□ 2.39
NCL-205ENST00000453992 CAMSAP2Q08AD1 1489 aa29.96■■■□□ 2.39
NCL-205ENST00000453992 ARHGEF12Q9NZN5 1544 aa29.96■■■□□ 2.39
NCL-205ENST00000453992 KDM5CP41229 1560 aa29.95■■■□□ 2.39
NCL-205ENST00000453992 ZNF777Q9ULD5 760 aaPredicted RBP29.95■■■□□ 2.39
NCL-205ENST00000453992 RAPGEF3O95398 923 aa29.93■■■□□ 2.38
NCL-205ENST00000453992 FGD6Q6ZV73 1430 aa29.9■■■□□ 2.38
NCL-205ENST00000453992 PTPN23Q9H3S7 1636 aa29.89■■■□□ 2.38
NCL-205ENST00000453992 MAGI2Q86UL8 1455 aa29.89■■■□□ 2.38
NCL-205ENST00000453992 TRAPPC8Q9Y2L5 1435 aa29.88■■■□□ 2.37
NCL-205ENST00000453992 ARHGEF5Q12774 1597 aa29.87■■■□□ 2.37
NCL-205ENST00000453992 HECW2Q9P2P5 1572 aa29.87■■■□□ 2.37
NCL-205ENST00000453992 ZNF644Q9H582 1327 aaPredicted RBP29.87■■■□□ 2.37
NCL-205ENST00000453992 MBD5Q9P267 1494 aa29.87■■■□□ 2.37
NCL-205ENST00000453992 TCOF1Q13428 1488 aaKnown RBP29.86■■■□□ 2.37
NCL-205ENST00000453992 ARHGEF40Q8TER5 1519 aa29.86■■■□□ 2.37
NCL-205ENST00000453992 ZFYVE16Q7Z3T8 1539 aa29.82■■■□□ 2.36
NCL-205ENST00000453992 CCDC141Q6ZP82 1450 aa29.81■■■□□ 2.36
NCL-205ENST00000453992 MLH3Q9UHC1 1453 aa29.81■■■□□ 2.36
NCL-205ENST00000453992 HNRNPMP52272 730 aaKnown RBP eCLIP29.81■■■□□ 2.36
NCL-205ENST00000453992 AEBP2Q6ZN18 517 aaPredicted RBP29.81■■■□□ 2.36
NCL-205ENST00000453992 KDM4FA0A1W2PPD8 638 aa29.8■■■□□ 2.36
NCL-205ENST00000453992 AFAP1Q8N556 730 aa29.8■■■□□ 2.36
NCL-205ENST00000453992 INO80Q9ULG1 1556 aaPredicted RBP29.79■■■□□ 2.36
NCL-205ENST00000453992 PPARGC1BQ86YN6 1023 aaKnown RBP29.79■■■□□ 2.36
NCL-205ENST00000453992 RSPH4AQ5TD94 716 aa29.78■■■□□ 2.36
NCL-205ENST00000453992 KIDINS220Q9ULH0 1771 aa29.77■■■□□ 2.36
NCL-205ENST00000453992 CROCC2H7BZ55 1655 aa29.74■■■□□ 2.35
NCL-205ENST00000453992 ATP7AQ04656 1500 aa29.74■■■□□ 2.35
NCL-205ENST00000453992 YEATS2Q9ULM3 1422 aa29.73■■■□□ 2.35
NCL-205ENST00000453992 DNMT1P26358 1616 aaKnown RBP29.73■■■□□ 2.35
NCL-205ENST00000453992 ABCA6Q8N139 1617 aa29.72■■■□□ 2.35
NCL-205ENST00000453992 DIP2CQ9Y2E4 1556 aa29.72■■■□□ 2.35
NCL-205ENST00000453992 SPAG9O60271 1321 aaKnown RBP29.71■■■□□ 2.35
NCL-205ENST00000453992 MAST1Q9Y2H9 1570 aa29.71■■■□□ 2.35
NCL-205ENST00000453992 RTEL1-TNFRSF6BF6WH68 1400 aa29.7■■■□□ 2.34
NCL-205ENST00000453992 REREQ9P2R6 1566 aa29.69■■■□□ 2.34
NCL-205ENST00000453992 SHANK2Q9UPX8 1470 aa29.68■■■□□ 2.34
NCL-205ENST00000453992 ATP10AO60312 1499 aa29.67■■■□□ 2.34
NCL-205ENST00000453992 RRBP1Q9P2E9 1410 aaKnown RBP29.66■■■□□ 2.34
NCL-205ENST00000453992 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.65■■■□□ 2.34
NCL-205ENST00000453992 C9orf84Q5VXU9 1444 aa29.65■■■□□ 2.34
NCL-205ENST00000453992 DAPK1P53355 1430 aa29.64■■■□□ 2.34
NCL-205ENST00000453992 ADGBQ8N7X0 1667 aa29.64■■■□□ 2.34
NCL-205ENST00000453992 MYT1LQ9UL68 1186 aa29.64■■■□□ 2.34
NCL-205ENST00000453992 ABCC5O15440 1437 aa29.63■■■□□ 2.33
NCL-205ENST00000453992 TSPY4P0CV99 314 aa29.61■■■□□ 2.33
NCL-205ENST00000453992 TSPY10P0CW01 314 aa29.61■■■□□ 2.33
NCL-205ENST00000453992 FAM50AQ14320 339 aaKnown RBP29.61■■■□□ 2.33
NCL-205ENST00000453992 PLXNC1O60486 1568 aa29.6■■■□□ 2.33
NCL-205ENST00000453992 SIGLEC1Q9BZZ2 1709 aa29.59■■■□□ 2.33
NCL-205ENST00000453992 AGLP35573 1532 aa29.54■■■□□ 2.32
NCL-205ENST00000453992 A2MP01023 1474 aa29.53■■■□□ 2.32
NCL-205ENST00000453992 BCORL1Q5H9F3 1711 aa29.51■■■□□ 2.31
NCL-205ENST00000453992 ADGRL2O95490 1459 aa29.5■■■□□ 2.31
NCL-205ENST00000453992 ARID4BQ4LE39 1312 aaPredicted RBP29.45■■■□□ 2.31
NCL-205ENST00000453992 DUOX2Q9NRD8 1548 aa29.45■■■□□ 2.3
NCL-205ENST00000453992 DHX29Q7Z478 1369 aaKnown RBP29.44■■■□□ 2.3
NCL-205ENST00000453992 ANKRD30AQ9BXX3 1397 aa29.44■■■□□ 2.3
NCL-205ENST00000453992 ADAMTSL3P82987 1691 aa29.44■■■□□ 2.3
NCL-205ENST00000453992 PTPRKQ15262 1439 aa29.43■■■□□ 2.3
NCL-205ENST00000453992 EIF2AK4Q9P2K8 1649 aaKnown RBP29.42■■■□□ 2.3
NCL-205ENST00000453992 NCOA1Q15788 1441 aa29.42■■■□□ 2.3
NCL-205ENST00000453992 KIF15Q9NS87 1388 aa29.41■■■□□ 2.3
NCL-205ENST00000453992 ROCK1Q13464 1354 aa29.39■■■□□ 2.3
NCL-205ENST00000453992 CHIC2Q9UKJ5 165 aa29.37■■■□□ 2.29
NCL-205ENST00000453992 ERBINQ96RT1 1412 aa29.37■■■□□ 2.29
NCL-205ENST00000453992 FER1L4A9Z1Z3 1794 aa29.36■■■□□ 2.29
NCL-205ENST00000453992 MADDQ8WXG6 1647 aa29.34■■■□□ 2.29
NCL-205ENST00000453992 RNF17Q9BXT8 1623 aaKnown RBP29.34■■■□□ 2.29
NCL-205ENST00000453992 RRP7BPQ9NSQ0 103 aa29.32■■■□□ 2.28
NCL-205ENST00000453992 ITGAEP38570 1179 aa29.31■■■□□ 2.28
NCL-205ENST00000453992 FAM135AQ9P2D6 1515 aa29.29■■■□□ 2.28
NCL-205ENST00000453992 RIMS1Q86UR5 1692 aaKnown RBP29.28■■■□□ 2.28
NCL-205ENST00000453992 GCC2Q8IWJ2 1684 aa29.26■■■□□ 2.27
NCL-205ENST00000453992 MLECQ14165 292 aa29.26■■■□□ 2.27
NCL-205ENST00000453992 DEPDC5O75140 1603 aa29.26■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms