RNA–Protein interactions for RNA: ENST00000453965.2

LINC01878-202, Transcript of long intergenic non-protein coding RNA 1878, humanhuman

TSL 3 BASIC

Gene LINC01878, Length 405 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01878-202ENST00000453965 SLC24A1O60721 1099 aa11.2□□□□□ -0.62
LINC01878-202ENST00000453965 C3orf67Q6ZVT6 689 aa11.19□□□□□ -0.62
LINC01878-202ENST00000453965 KDM2AQ9Y2K7 1162 aa11.19□□□□□ -0.62
LINC01878-202ENST00000453965 OTUD5Q96G74 571 aa11.17□□□□□ -0.62
LINC01878-202ENST00000453965 CRISPLD2Q9H0B8 497 aa11.17□□□□□ -0.62
LINC01878-202ENST00000453965 C2orf72A6NCS6 295 aa11.15□□□□□ -0.62
LINC01878-202ENST00000453965 POTEGQ6S5H5 508 aa11.15□□□□□ -0.62
LINC01878-202ENST00000453965 KIF3CO14782 793 aa11.14□□□□□ -0.63
LINC01878-202ENST00000453965 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.13□□□□□ -0.63
LINC01878-202ENST00000453965 LARP6Q9BRS8 491 aaKnown RBP11.11□□□□□ -0.63
LINC01878-202ENST00000453965 SCUBE2Q9NQ36 999 aa11.11□□□□□ -0.63
LINC01878-202ENST00000453965 DSG2Q14126 1118 aa11.1□□□□□ -0.63
LINC01878-202ENST00000453965 GPHNQ9NQX3 736 aaPredicted RBP11.1□□□□□ -0.63
LINC01878-202ENST00000453965 SLAIN1Q8ND83 568 aa11.09□□□□□ -0.63
LINC01878-202ENST00000453965 TMC2Q8TDI7 906 aa11.09□□□□□ -0.63
LINC01878-202ENST00000453965 MFSD10Q14728 455 aa11.07□□□□□ -0.64
LINC01878-202ENST00000453965 MAMSTRQ6ZN01 415 aa11.07□□□□□ -0.64
LINC01878-202ENST00000453965 PDE4AP27815 886 aa11.06□□□□□ -0.64
LINC01878-202ENST00000453965 VSIG10Q8N0Z9 540 aa11.06□□□□□ -0.64
LINC01878-202ENST00000453965 PPP1R15BQ5SWA1 713 aa11.05□□□□□ -0.64
LINC01878-202ENST00000453965 DDX27Q96GQ7 796 aaKnown RBP11.05□□□□□ -0.64
LINC01878-202ENST00000453965 FOXK1P85037 733 aa11.03□□□□□ -0.64
LINC01878-202ENST00000453965 PLPP6Q8IY26 295 aa11.03□□□□□ -0.64
LINC01878-202ENST00000453965 PCDH10Q9P2E7 1040 aa11.02□□□□□ -0.65
LINC01878-202ENST00000453965 HOXB3P14651 431 aaPredicted RBP10.97□□□□□ -0.65
LINC01878-202ENST00000453965 KCNV2Q8TDN2 545 aa10.97□□□□□ -0.65
LINC01878-202ENST00000453965 EMILIN3Q9NT22 766 aa10.97□□□□□ -0.65
LINC01878-202ENST00000453965 WDR70Q9NW82 654 aa10.97□□□□□ -0.65
LINC01878-202ENST00000453965 CAMK2BQ13554 666 aa10.94□□□□□ -0.66
LINC01878-202ENST00000453965 E2F4Q16254 413 aa10.93□□□□□ -0.66
LINC01878-202ENST00000453965 UPF1Q92900 1129 aaKnown RBP eCLIP10.93□□□□□ -0.66
LINC01878-202ENST00000453965 DPYSL4O14531 572 aa10.88□□□□□ -0.67
LINC01878-202ENST00000453965 OXER1Q8TDS5 423 aa10.88□□□□□ -0.67
LINC01878-202ENST00000453965 KHSRPQ92945 711 aaKnown RBP eCLIP10.88□□□□□ -0.67
LINC01878-202ENST00000453965 SLC34A2O95436 690 aa10.85□□□□□ -0.67
LINC01878-202ENST00000453965 DOK7Q18PE1 504 aa10.84□□□□□ -0.67
LINC01878-202ENST00000453965 LCE2DQ5TA82 110 aaPredicted RBP10.84□□□□□ -0.67
LINC01878-202ENST00000453965 PTCD2Q8WV60 388 aaKnown RBP10.84□□□□□ -0.67
LINC01878-202ENST00000453965 PCDHGA4Q9Y5G9 962 aa10.84□□□□□ -0.67
LINC01878-202ENST00000453965 ARSIQ5FYB1 569 aa10.83□□□□□ -0.68
LINC01878-202ENST00000453965 GPR153Q6NV75 609 aa10.81□□□□□ -0.68
LINC01878-202ENST00000453965 P3H3Q8IVL6 736 aa10.81□□□□□ -0.68
LINC01878-202ENST00000453965 ST18O60284 1047 aa10.8□□□□□ -0.68
LINC01878-202ENST00000453965 SNPHO15079 494 aa10.79□□□□□ -0.68
LINC01878-202ENST00000453965 ZNF710Q8N1W2 664 aa10.79□□□□□ -0.68
LINC01878-202ENST00000453965 ARHGEF1Q92888 912 aaKnown RBP10.79□□□□□ -0.68
LINC01878-202ENST00000453965 ARIH1Q9Y4X5 557 aaPredicted RBP10.79□□□□□ -0.68
LINC01878-202ENST00000453965 KDM4FA0A1W2PPD8 638 aa10.78□□□□□ -0.68
LINC01878-202ENST00000453965 NUDT7P0C024 238 aa10.78□□□□□ -0.68
LINC01878-202ENST00000453965 MAP3K9P80192 1104 aa10.78□□□□□ -0.68
LINC01878-202ENST00000453965 FAM163AQ96GL9 167 aaPredicted RBP10.78□□□□□ -0.68
LINC01878-202ENST00000453965 PDIA6Q15084 440 aa10.76□□□□□ -0.69
LINC01878-202ENST00000453965 RIMBP2O15034 1052 aa10.75□□□□□ -0.69
LINC01878-202ENST00000453965 EVI5O60447 810 aa10.75□□□□□ -0.69
LINC01878-202ENST00000453965 MARVELD3Q96A59 401 aa10.75□□□□□ -0.69
LINC01878-202ENST00000453965 SEMA3EO15041 775 aa10.74□□□□□ -0.69
LINC01878-202ENST00000453965 HOXB1P14653 301 aaPredicted RBP10.74□□□□□ -0.69
LINC01878-202ENST00000453965 ZSWIM6Q9HCJ5 1215 aa10.74□□□□□ -0.69
LINC01878-202ENST00000453965 MLLT3P42568 568 aaPredicted RBP10.71□□□□□ -0.69
LINC01878-202ENST00000453965 TBC1D12O60347 775 aa10.7□□□□□ -0.7
LINC01878-202ENST00000453965 DDX12PQ92771 950 aa10.69□□□□□ -0.7
LINC01878-202ENST00000453965 LHX6Q9UPM6 363 aa10.69□□□□□ -0.7
LINC01878-202ENST00000453965 ANO8Q9HCE9 1232 aaPredicted RBP10.68□□□□□ -0.7
LINC01878-202ENST00000453965 SPDYE16A6NNV3 312 aaPredicted RBP10.67□□□□□ -0.7
LINC01878-202ENST00000453965 POTEB3A0JP26 581 aa10.66□□□□□ -0.7
LINC01878-202ENST00000453965 PRIM1P49642 420 aaKnown RBP10.66□□□□□ -0.7
LINC01878-202ENST00000453965 EMP3P54852 163 aa10.66□□□□□ -0.7
LINC01878-202ENST00000453965 POTEBQ6S5H4 581 aa10.66□□□□□ -0.7
LINC01878-202ENST00000453965 TESPA1A2RU30 521 aaPredicted RBP10.65□□□□□ -0.7
LINC01878-202ENST00000453965 NBR1Q14596 966 aa10.65□□□□□ -0.7
LINC01878-202ENST00000453965 ZNF316A6NFI3 1004 aaPredicted RBP10.64□□□□□ -0.71
LINC01878-202ENST00000453965 GRXCR2A6NFK2 248 aa10.63□□□□□ -0.71
LINC01878-202ENST00000453965 PCDHGA10Q9Y5H3 936 aa10.62□□□□□ -0.71
LINC01878-202ENST00000453965 FAM205CA6NFA0 338 aa10.61□□□□□ -0.71
LINC01878-202ENST00000453965 PTGER2P43116 358 aa10.61□□□□□ -0.71
LINC01878-202ENST00000453965 FOSBP53539 338 aa10.61□□□□□ -0.71
LINC01878-202ENST00000453965 VARS2Q5ST30 1063 aaKnown RBP10.61□□□□□ -0.71
LINC01878-202ENST00000453965 ZNF454Q8N9F8 522 aa10.61□□□□□ -0.71
LINC01878-202ENST00000453965 ERBB3P21860 1342 aa10.59□□□□□ -0.71
LINC01878-202ENST00000453965 CDAN1Q8IWY9 1227 aa10.59□□□□□ -0.71
LINC01878-202ENST00000453965 BCANQ96GW7 911 aa10.59□□□□□ -0.71
LINC01878-202ENST00000453965 JPH4Q96JJ6 628 aa10.59□□□□□ -0.71
LINC01878-202ENST00000453965 OSBPP22059 807 aa10.58□□□□□ -0.72
LINC01878-202ENST00000453965 HS3ST6Q96QI5 342 aa10.58□□□□□ -0.72
LINC01878-202ENST00000453965 PHF14O94880 888 aa10.56□□□□□ -0.72
LINC01878-202ENST00000453965 RBM26Q5T8P6 1007 aaKnown RBP10.56□□□□□ -0.72
LINC01878-202ENST00000453965 RBM33Q96EV2 1170 aaKnown RBP10.56□□□□□ -0.72
LINC01878-202ENST00000453965 ADAM33Q9BZ11 813 aa10.56□□□□□ -0.72
LINC01878-202ENST00000453965 POTEEQ6S8J3 1075 aa10.54□□□□□ -0.72
LINC01878-202ENST00000453965 TSR1Q2NL82 804 aaKnown RBP10.53□□□□□ -0.72
LINC01878-202ENST00000453965 TYW1BQ6NUM6 668 aa10.53□□□□□ -0.72
LINC01878-202ENST00000453965 CDHR5Q9HBB8 845 aa10.53□□□□□ -0.72
LINC01878-202ENST00000453965 EN1Q05925 392 aaPredicted RBP10.52□□□□□ -0.73
LINC01878-202ENST00000453965 PPP4R3BQ5MIZ7 849 aa10.52□□□□□ -0.73
LINC01878-202ENST00000453965 ZDHHC16Q969W1 377 aa10.52□□□□□ -0.73
LINC01878-202ENST00000453965 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.5□□□□□ -0.73
LINC01878-202ENST00000453965 EPAS1Q99814 870 aa10.5□□□□□ -0.73
LINC01878-202ENST00000453965 AXIN2Q9Y2T1 843 aa10.5□□□□□ -0.73
LINC01878-202ENST00000453965 MAP3K7O43318 606 aa10.49□□□□□ -0.73
LINC01878-202ENST00000453965 LMOD2Q6P5Q4 547 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms