RNA–Protein interactions for RNA: ENST00000453553.1

USP25-206, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 611 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-206ENST00000453553 NLRP6P59044 892 aa11.68□□□□□ -0.54
USP25-206ENST00000453553 MKRN3Q13064 507 aaKnown RBP11.68□□□□□ -0.54
USP25-206ENST00000453553 PHF8Q9UPP1 1060 aa11.68□□□□□ -0.54
USP25-206ENST00000453553 VSIG10Q8N0Z9 540 aa11.66□□□□□ -0.54
USP25-206ENST00000453553 FBXO22Q8NEZ5 403 aa11.66□□□□□ -0.54
USP25-206ENST00000453553 POTEB3A0JP26 581 aa11.64□□□□□ -0.55
USP25-206ENST00000453553 POTEBQ6S5H4 581 aa11.64□□□□□ -0.55
USP25-206ENST00000453553 C3orf67Q6ZVT6 689 aa11.64□□□□□ -0.55
USP25-206ENST00000453553 L3MBTL3Q96JM7 780 aaPredicted RBP11.64□□□□□ -0.55
USP25-206ENST00000453553 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.64□□□□□ -0.555e-7■■■■□ 19.4
USP25-206ENST00000453553 ILDR1Q86SU0 546 aaPredicted RBP11.62□□□□□ -0.55
USP25-206ENST00000453553 EMP3P54852 163 aa11.6□□□□□ -0.55
USP25-206ENST00000453553 DPY19L2Q6NUT2 758 aa11.6□□□□□ -0.55
USP25-206ENST00000453553 MS4A4AQ96JQ5 239 aa11.59□□□□□ -0.55
USP25-206ENST00000453553 PPP1R37O75864 691 aa11.58□□□□□ -0.56
USP25-206ENST00000453553 KRTAP3-3Q9BYR6 98 aa11.58□□□□□ -0.56
USP25-206ENST00000453553 KRTAP3-2Q9BYR7 98 aa11.58□□□□□ -0.56
USP25-206ENST00000453553 KDM2AQ9Y2K7 1162 aa11.58□□□□□ -0.56
USP25-206ENST00000453553 HS3ST6Q96QI5 342 aa11.57□□□□□ -0.56
USP25-206ENST00000453553 FAM205CA6NFA0 338 aa11.54□□□□□ -0.56
USP25-206ENST00000453553 HOXB3P14651 431 aaPredicted RBP11.5□□□□□ -0.57
USP25-206ENST00000453553 BOLA1Q9Y3E2 137 aa11.48□□□□□ -0.57
USP25-206ENST00000453553 CADPS2Q86UW7 1296 aa11.47□□□□□ -0.57
USP25-206ENST00000453553 HOXB1P14653 301 aaPredicted RBP11.39□□□□□ -0.59
USP25-206ENST00000453553 G3V3G9 751 aa11.38□□□□□ -0.59
USP25-206ENST00000453553 MICALL2Q8IY33 904 aa11.37□□□□□ -0.59
USP25-206ENST00000453553 WDR70Q9NW82 654 aa11.37□□□□□ -0.59
USP25-206ENST00000453553 PDE4AP27815 886 aa11.36□□□□□ -0.59
USP25-206ENST00000453553 ZNF710Q8N1W2 664 aa11.34□□□□□ -0.59
USP25-206ENST00000453553 NCKAP5LQ9HCH0 1330 aa11.34□□□□□ -0.59
USP25-206ENST00000453553 CRISPLD2Q9H0B8 497 aa11.33□□□□□ -0.6
USP25-206ENST00000453553 DOK7Q18PE1 504 aa11.32□□□□□ -0.6
USP25-206ENST00000453553 TMEM92Q6UXU6 159 aa11.32□□□□□ -0.6
USP25-206ENST00000453553 ERBB3P21860 1342 aa11.32□□□□□ -0.6
USP25-206ENST00000453553 LARP6Q9BRS8 491 aaKnown RBP11.31□□□□□ -0.6
USP25-206ENST00000453553 GPHNQ9NQX3 736 aaPredicted RBP11.28□□□□□ -0.6
USP25-206ENST00000453553 MFSD10Q14728 455 aa11.27□□□□□ -0.61
USP25-206ENST00000453553 VARS2Q5ST30 1063 aaKnown RBP11.26□□□□□ -0.61
USP25-206ENST00000453553 DDX27Q96GQ7 796 aaKnown RBP11.25□□□□□ -0.61
USP25-206ENST00000453553 BCANQ96GW7 911 aa11.25□□□□□ -0.61
USP25-206ENST00000453553 TMC2Q8TDI7 906 aa11.24□□□□□ -0.61
USP25-206ENST00000453553 P3H3Q8IVL6 736 aa11.23□□□□□ -0.61
USP25-206ENST00000453553 RIMBP2O15034 1052 aa11.22□□□□□ -0.61
USP25-206ENST00000453553 E2F4Q16254 413 aa11.22□□□□□ -0.61
USP25-206ENST00000453553 GPR153Q6NV75 609 aa11.22□□□□□ -0.61
USP25-206ENST00000453553 C2orf72A6NCS6 295 aa11.21□□□□□ -0.61
USP25-206ENST00000453553 KIF3CO14782 793 aa11.21□□□□□ -0.61
USP25-206ENST00000453553 RNF166Q96A37 237 aaPredicted RBP11.21□□□□□ -0.61
USP25-206ENST00000453553 PPP1R15BQ5SWA1 713 aa11.2□□□□□ -0.62
USP25-206ENST00000453553 FOXK1P85037 733 aa11.19□□□□□ -0.62
USP25-206ENST00000453553 DSG2Q14126 1118 aa11.19□□□□□ -0.62
USP25-206ENST00000453553 ZNF687Q8N1G0 1237 aa11.19□□□□□ -0.62
USP25-206ENST00000453553 KCNV2Q8TDN2 545 aa11.19□□□□□ -0.62
USP25-206ENST00000453553 ZSWIM6Q9HCJ5 1215 aa11.19□□□□□ -0.62
USP25-206ENST00000453553 CAMK2BQ13554 666 aa11.16□□□□□ -0.62
USP25-206ENST00000453553 MYT1LQ9UL68 1186 aa11.16□□□□□ -0.62
USP25-206ENST00000453553 NBR1Q14596 966 aa11.15□□□□□ -0.62
USP25-206ENST00000453553 PLPP6Q8IY26 295 aa11.15□□□□□ -0.62
USP25-206ENST00000453553 ARHGEF1Q92888 912 aaKnown RBP11.15□□□□□ -0.62
USP25-206ENST00000453553 ARSIQ5FYB1 569 aa11.13□□□□□ -0.63
USP25-206ENST00000453553 KHSRPQ92945 711 aaKnown RBP eCLIP11.11□□□□□ -0.638e-9■■■■■ 31
USP25-206ENST00000453553 ARIH1Q9Y4X5 557 aaPredicted RBP11.1□□□□□ -0.63
USP25-206ENST00000453553 EMILIN3Q9NT22 766 aa11.07□□□□□ -0.64
USP25-206ENST00000453553 ZNF316A6NFI3 1004 aaPredicted RBP11.04□□□□□ -0.64
USP25-206ENST00000453553 ANKRD13DQ6ZTN6 518 aa11.04□□□□□ -0.64
USP25-206ENST00000453553 DPYSL4O14531 572 aa11.01□□□□□ -0.65
USP25-206ENST00000453553 PTGER2P43116 358 aa11.01□□□□□ -0.65
USP25-206ENST00000453553 OXER1Q8TDS5 423 aa11□□□□□ -0.65
USP25-206ENST00000453553 MAP3K9P80192 1104 aa10.99□□□□□ -0.65
USP25-206ENST00000453553 SEMA3EO15041 775 aa10.98□□□□□ -0.65
USP25-206ENST00000453553 SLC34A2O95436 690 aa10.98□□□□□ -0.65
USP25-206ENST00000453553 LSM11P83369 360 aaKnown RBP eCLIP10.98□□□□□ -0.65
USP25-206ENST00000453553 UPF1Q92900 1129 aaKnown RBP eCLIP10.98□□□□□ -0.65
USP25-206ENST00000453553 SPDYE16A6NNV3 312 aaPredicted RBP10.97□□□□□ -0.65
USP25-206ENST00000453553 PTCD2Q8WV60 388 aaKnown RBP10.97□□□□□ -0.65
USP25-206ENST00000453553 POTEEQ6S8J3 1075 aa10.96□□□□□ -0.65
USP25-206ENST00000453553 TESPA1A2RU30 521 aaPredicted RBP10.95□□□□□ -0.66
USP25-206ENST00000453553 TBC1D12O60347 775 aa10.95□□□□□ -0.66
USP25-206ENST00000453553 NUDT7P0C024 238 aa10.94□□□□□ -0.66
USP25-206ENST00000453553 PDIA6Q15084 440 aa10.94□□□□□ -0.66
USP25-206ENST00000453553 LHX6Q9UPM6 363 aa10.91□□□□□ -0.66
USP25-206ENST00000453553 AXIN2Q9Y2T1 843 aa10.91□□□□□ -0.66
USP25-206ENST00000453553 SMYD5Q6GMV2 418 aa10.9□□□□□ -0.66
USP25-206ENST00000453553 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.9□□□□□ -0.66
USP25-206ENST00000453553 TULP1O00294 542 aaPredicted RBP10.89□□□□□ -0.67
USP25-206ENST00000453553 EVI5O60447 810 aa10.89□□□□□ -0.67
USP25-206ENST00000453553 PCDHGA4Q9Y5G9 962 aa10.89□□□□□ -0.67
USP25-206ENST00000453553 PBX2P40425 430 aa10.87□□□□□ -0.67
USP25-206ENST00000453553 MLLT3P42568 568 aaPredicted RBP10.87□□□□□ -0.67
USP25-206ENST00000453553 ANO8Q9HCE9 1232 aaPredicted RBP10.87□□□□□ -0.67
USP25-206ENST00000453553 LMOD2Q6P5Q4 547 aa10.85□□□□□ -0.67
USP25-206ENST00000453553 TPRNQ4KMQ1 711 aa10.84□□□□□ -0.67
USP25-206ENST00000453553 KDM4FA0A1W2PPD8 638 aa10.81□□□□□ -0.68
USP25-206ENST00000453553 GRXCR2A6NFK2 248 aa10.81□□□□□ -0.68
USP25-206ENST00000453553 PRKCSHP14314 528 aaPredicted RBP10.81□□□□□ -0.68
USP25-206ENST00000453553 PLA2G2EQ9NZK7 142 aa10.8□□□□□ -0.68
USP25-206ENST00000453553 DDX12PQ92771 950 aa10.79□□□□□ -0.68
USP25-206ENST00000453553 ADGRD1Q6QNK2 874 aa10.78□□□□□ -0.68
USP25-206ENST00000453553 RBM26Q5T8P6 1007 aaKnown RBP10.77□□□□□ -0.69
USP25-206ENST00000453553 HCSTQ9UBK5 93 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms