RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 ABCC5O15440 1437 aa16.88■□□□□ 0.29
VTA1-203ENST00000452973 KDM6BO15054 1643 aa16.88■□□□□ 0.29
VTA1-203ENST00000452973 ATP10BO94823 1461 aa16.88■□□□□ 0.29
VTA1-203ENST00000452973 MPHOSPH9Q99550 1183 aa16.87■□□□□ 0.29
VTA1-203ENST00000452973 TIMELESSQ9UNS1 1208 aa16.87■□□□□ 0.29
VTA1-203ENST00000452973 GPATCH8Q9UKJ3 1502 aaKnown RBP16.86■□□□□ 0.29
VTA1-203ENST00000452973 ABCA8O94911 1581 aa16.84■□□□□ 0.29
VTA1-203ENST00000452973 CAMSAP2Q08AD1 1489 aa16.84■□□□□ 0.29
VTA1-203ENST00000452973 DDX10Q13206 875 aaKnown RBP16.82■□□□□ 0.28
VTA1-203ENST00000452973 SLC4A1APQ9BWU0 796 aaKnown RBP16.81■□□□□ 0.28
VTA1-203ENST00000452973 GCC2Q8IWJ2 1684 aa16.81■□□□□ 0.28
VTA1-203ENST00000452973 DNMT1P26358 1616 aaKnown RBP16.8■□□□□ 0.28
VTA1-203ENST00000452973 AKNAQ7Z591 1439 aa16.8■□□□□ 0.28
VTA1-203ENST00000452973 KCNH8Q96L42 1107 aa16.8■□□□□ 0.28
VTA1-203ENST00000452973 HNRNPMP52272 730 aaKnown RBP eCLIP16.79■□□□□ 0.28
VTA1-203ENST00000452973 ROCK1Q13464 1354 aa16.79■□□□□ 0.28
VTA1-203ENST00000452973 ERCC6L2Q5T890 1561 aa16.78■□□□□ 0.28
VTA1-203ENST00000452973 DENND4BO75064 1496 aaPredicted RBP16.77■□□□□ 0.28
VTA1-203ENST00000452973 ITSN2Q9NZM3 1697 aa16.76■□□□□ 0.27
VTA1-203ENST00000452973 TSPY4P0CV99 314 aa16.75■□□□□ 0.27
VTA1-203ENST00000452973 TSPY10P0CW01 314 aa16.75■□□□□ 0.27
VTA1-203ENST00000452973 NCOA1Q15788 1441 aa16.74■□□□□ 0.27
VTA1-203ENST00000452973 GTF3C3Q9Y5Q9 886 aa16.74■□□□□ 0.27
VTA1-203ENST00000452973 ADCY10Q96PN6 1610 aa16.74■□□□□ 0.27
VTA1-203ENST00000452973 ABCC10Q5T3U5 1492 aa16.72■□□□□ 0.27
VTA1-203ENST00000452973 L3MBTL2Q969R5 705 aa16.72■□□□□ 0.27
VTA1-203ENST00000452973 ANKRD30AQ9BXX3 1397 aa16.72■□□□□ 0.27
VTA1-203ENST00000452973 CDC42BPAQ5VT25 1732 aa16.71■□□□□ 0.27
VTA1-203ENST00000452973 SHROOM2Q13796 1616 aa16.68■□□□□ 0.26
VTA1-203ENST00000452973 PKD2Q13563 968 aa16.67■□□□□ 0.26
VTA1-203ENST00000452973 C9orf84Q5VXU9 1444 aa16.67■□□□□ 0.26
VTA1-203ENST00000452973 ANKRD50Q9ULJ7 1429 aa16.67■□□□□ 0.26
VTA1-203ENST00000452973 ANKRD30BQ9BXX2 1392 aa16.66■□□□□ 0.26
VTA1-203ENST00000452973 NUP155O75694 1391 aa16.64■□□□□ 0.25
VTA1-203ENST00000452973 ZNF326Q5BKZ1 582 aaKnown RBP16.64■□□□□ 0.25
VTA1-203ENST00000452973 KDM5BQ9UGL1 1544 aa16.63■□□□□ 0.25
VTA1-203ENST00000452973 ABCC2Q92887 1545 aa16.63■□□□□ 0.25
VTA1-203ENST00000452973 HSPA5P11021 654 aaKnown RBP16.62■□□□□ 0.25
VTA1-203ENST00000452973 PZPP20742 1482 aa16.62■□□□□ 0.25
VTA1-203ENST00000452973 ADGBQ8N7X0 1667 aa16.62■□□□□ 0.25
VTA1-203ENST00000452973 KIF15Q9NS87 1388 aa16.62■□□□□ 0.25
VTA1-203ENST00000452973 ADGRL2O95490 1459 aa16.62■□□□□ 0.25
VTA1-203ENST00000452973 ARHGAP5Q13017 1502 aa16.62■□□□□ 0.25
VTA1-203ENST00000452973 CROCC2H7BZ55 1655 aa16.61■□□□□ 0.25
VTA1-203ENST00000452973 NBPF8Q3BBV2 869 aa16.6■□□□□ 0.25
VTA1-203ENST00000452973 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.6■□□□□ 0.251e-6■■□□□ 12.9
VTA1-203ENST00000452973 CLASP1Q7Z460 1538 aa16.6■□□□□ 0.25
VTA1-203ENST00000452973 TTC37Q6PGP7 1564 aa16.59■□□□□ 0.25
VTA1-203ENST00000452973 EIF4G2P78344 907 aaKnown RBP eCLIP16.59■□□□□ 0.25
VTA1-203ENST00000452973 RPRD2Q5VT52 1461 aaKnown RBP16.59■□□□□ 0.25
VTA1-203ENST00000452973 MBD5Q9P267 1494 aa16.59■□□□□ 0.25
VTA1-203ENST00000452973 CDC42BPBQ9Y5S2 1711 aa16.58■□□□□ 0.25
VTA1-203ENST00000452973 SAMD9LQ8IVG5 1584 aa16.58■□□□□ 0.25
VTA1-203ENST00000452973 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.58■□□□□ 0.25
VTA1-203ENST00000452973 ANP32CO43423 234 aa16.57■□□□□ 0.24
VTA1-203ENST00000452973 SYCP2Q9BX26 1530 aa16.56■□□□□ 0.24
VTA1-203ENST00000452973 CCDC141Q6ZP82 1450 aa16.56■□□□□ 0.24
VTA1-203ENST00000452973 KIAA1107Q9UPP5 1409 aa16.56■□□□□ 0.24
VTA1-203ENST00000452973 PREX2Q70Z35 1606 aa16.55■□□□□ 0.24
VTA1-203ENST00000452973 SHANK2Q9UPX8 1470 aa16.55■□□□□ 0.24
VTA1-203ENST00000452973 RSPH4AQ5TD94 716 aa16.54■□□□□ 0.24
VTA1-203ENST00000452973 EFCAB2Q5VUJ9 269 aa16.52■□□□□ 0.24
VTA1-203ENST00000452973 KDM2AQ9Y2K7 1162 aa16.52■□□□□ 0.24
VTA1-203ENST00000452973 ZCCHC11Q5TAX3 1644 aaKnown RBP16.52■□□□□ 0.24
VTA1-203ENST00000452973 WASHC2AQ641Q2 1341 aa16.52■□□□□ 0.23
VTA1-203ENST00000452973 TEX14Q8IWB6 1497 aa16.51■□□□□ 0.23
VTA1-203ENST00000452973 ARHGEF5Q12774 1597 aa16.51■□□□□ 0.23
VTA1-203ENST00000452973 MYT1LQ9UL68 1186 aa16.49■□□□□ 0.23
VTA1-203ENST00000452973 C11orf95C9JLR9 678 aaPredicted RBP16.48■□□□□ 0.23
VTA1-203ENST00000452973 OSCARQ8IYS5 282 aa16.48■□□□□ 0.23
VTA1-203ENST00000452973 POLR3GLQ9BT43 218 aa16.48■□□□□ 0.23
VTA1-203ENST00000452973 MYO5CQ9NQX4 1742 aa16.48■□□□□ 0.23
VTA1-203ENST00000452973 AFAP1Q8N556 730 aa16.48■□□□□ 0.23
VTA1-203ENST00000452973 PLCH2O75038 1416 aa16.47■□□□□ 0.23
VTA1-203ENST00000452973 UHRF1BP1LA0JNW5 1464 aa16.47■□□□□ 0.23
VTA1-203ENST00000452973 ARHGEF12Q9NZN5 1544 aa16.46■□□□□ 0.23
VTA1-203ENST00000452973 RGL3Q3MIN7 710 aa16.45■□□□□ 0.22
VTA1-203ENST00000452973 DCAF11Q8TEB1 546 aa16.45■□□□□ 0.22
VTA1-203ENST00000452973 CNGB1Q14028 1251 aaPredicted RBP16.44■□□□□ 0.22
VTA1-203ENST00000452973 PLEKHH2Q8IVE3 1493 aa16.43■□□□□ 0.22
VTA1-203ENST00000452973 TRAPPC8Q9Y2L5 1435 aa16.43■□□□□ 0.22
VTA1-203ENST00000452973 SPAG9O60271 1321 aaKnown RBP16.42■□□□□ 0.22
VTA1-203ENST00000452973 NPM1P06748 294 aaKnown RBP eCLIP16.41■□□□□ 0.22
VTA1-203ENST00000452973 FAM135AQ9P2D6 1515 aa16.41■□□□□ 0.22
VTA1-203ENST00000452973 CCER2I3L3R5 266 aa16.39■□□□□ 0.21
VTA1-203ENST00000452973 WDR7Q9Y4E6 1490 aa16.39■□□□□ 0.21
VTA1-203ENST00000452973 CCDC7Q96M83 1385 aa16.38■□□□□ 0.21
VTA1-203ENST00000452973 CARD11Q9BXL7 1154 aa16.38■□□□□ 0.21
VTA1-203ENST00000452973 KIF7Q2M1P5 1343 aa16.37■□□□□ 0.21
VTA1-203ENST00000452973 KDM5DQ9BY66 1539 aa16.37■□□□□ 0.21
VTA1-203ENST00000452973 USP47Q96K76 1375 aa16.37■□□□□ 0.21
VTA1-203ENST00000452973 CCDC144AA2RUR9 1427 aa16.36■□□□□ 0.21
VTA1-203ENST00000452973 ASXL2Q76L83 1435 aa16.36■□□□□ 0.21
VTA1-203ENST00000452973 ABCC1P33527 1531 aa16.34■□□□□ 0.21
VTA1-203ENST00000452973 MAST1Q9Y2H9 1570 aa16.34■□□□□ 0.21
VTA1-203ENST00000452973 SPATA31E1Q6ZUB1 1445 aa16.34■□□□□ 0.21
VTA1-203ENST00000452973 FANCAO15360 1455 aa16.34■□□□□ 0.21
VTA1-203ENST00000452973 DUOX2Q9NRD8 1548 aa16.33■□□□□ 0.2
VTA1-203ENST00000452973 CNTLNQ9NXG0 1405 aa16.32■□□□□ 0.2
VTA1-203ENST00000452973 SCAPERQ9BY12 1400 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 294.9 ms