RNA–Protein interactions for RNA: ENST00000452140.5

VPS8-211, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 392 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-211ENST00000452140 L3MBTL3Q96JM7 780 aaPredicted RBP9.39□□□□□ -0.91
VPS8-211ENST00000452140 NLRP6P59044 892 aa9.38□□□□□ -0.91
VPS8-211ENST00000452140 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.38□□□□□ -0.912e-10■■■■■ 46.3
VPS8-211ENST00000452140 SOX12O15370 315 aa9.37□□□□□ -0.91
VPS8-211ENST00000452140 PDCD7Q8N8D1 485 aaKnown RBP9.37□□□□□ -0.91
VPS8-211ENST00000452140 ST18O60284 1047 aa9.36□□□□□ -0.91
VPS8-211ENST00000452140 C3orf67Q6ZVT6 689 aa9.36□□□□□ -0.91
VPS8-211ENST00000452140 MS4A4AQ96JQ5 239 aa9.33□□□□□ -0.92
VPS8-211ENST00000452140 TMEM121BQ9BXQ6 578 aaPredicted RBP9.33□□□□□ -0.92
VPS8-211ENST00000452140 CDAN1Q8IWY9 1227 aa9.31□□□□□ -0.92
VPS8-211ENST00000452140 ILDR1Q86SU0 546 aaPredicted RBP9.3□□□□□ -0.92
VPS8-211ENST00000452140 G3V3G9 751 aa9.29□□□□□ -0.92
VPS8-211ENST00000452140 NBR1Q14596 966 aa9.26□□□□□ -0.93
VPS8-211ENST00000452140 WDR70Q9NW82 654 aa9.25□□□□□ -0.93
VPS8-211ENST00000452140 PRKCSHP14314 528 aaPredicted RBP9.23□□□□□ -0.93
VPS8-211ENST00000452140 DPY19L2Q6NUT2 758 aa9.23□□□□□ -0.93
VPS8-211ENST00000452140 BOLA1Q9Y3E2 137 aa9.23□□□□□ -0.93
VPS8-211ENST00000452140 KCNV2Q8TDN2 545 aa9.21□□□□□ -0.94
VPS8-211ENST00000452140 NCKAP5LQ9HCH0 1330 aa9.21□□□□□ -0.94
VPS8-211ENST00000452140 MARVELD3Q96A59 401 aa9.2□□□□□ -0.94
VPS8-211ENST00000452140 P3H3Q8IVL6 736 aa9.18□□□□□ -0.94
VPS8-211ENST00000452140 EMP3P54852 163 aa9.17□□□□□ -0.94
VPS8-211ENST00000452140 TPRNQ4KMQ1 711 aa9.17□□□□□ -0.94
VPS8-211ENST00000452140 LARP6Q9BRS8 491 aaKnown RBP9.17□□□□□ -0.94
VPS8-211ENST00000452140 CRISPLD2Q9H0B8 497 aa9.14□□□□□ -0.95
VPS8-211ENST00000452140 PDE4AP27815 886 aa9.13□□□□□ -0.95
VPS8-211ENST00000452140 E2F4Q16254 413 aa9.12□□□□□ -0.95
VPS8-211ENST00000452140 MICALL2Q8IY33 904 aa9.12□□□□□ -0.95
VPS8-211ENST00000452140 ZNF710Q8N1W2 664 aa9.11□□□□□ -0.95
VPS8-211ENST00000452140 DDX27Q96GQ7 796 aaKnown RBP9.11□□□□□ -0.95
VPS8-211ENST00000452140 MFSD10Q14728 455 aa9.1□□□□□ -0.95
VPS8-211ENST00000452140 DOK7Q18PE1 504 aa9.1□□□□□ -0.95
VPS8-211ENST00000452140 FAM205CA6NFA0 338 aa9.08□□□□□ -0.96
VPS8-211ENST00000452140 RIMBP2O15034 1052 aa9.08□□□□□ -0.96
VPS8-211ENST00000452140 SPNS2Q8IVW8 549 aa9.08□□□□□ -0.96
VPS8-211ENST00000452140 HS3ST6Q96QI5 342 aa9.08□□□□□ -0.96
VPS8-211ENST00000452140 HOXB3P14651 431 aaPredicted RBP9.07□□□□□ -0.96
VPS8-211ENST00000452140 GPHNQ9NQX3 736 aaPredicted RBP9.06□□□□□ -0.96
VPS8-211ENST00000452140 HOXB1P14653 301 aaPredicted RBP9.05□□□□□ -0.96
VPS8-211ENST00000452140 MMRN1Q13201 1228 aa9.05□□□□□ -0.96
VPS8-211ENST00000452140 PPP1R15BQ5SWA1 713 aa9.05□□□□□ -0.96
VPS8-211ENST00000452140 ARHGEF1Q92888 912 aaKnown RBP9.05□□□□□ -0.96
VPS8-211ENST00000452140 DSG2Q14126 1118 aa9.03□□□□□ -0.96
VPS8-211ENST00000452140 TMC2Q8TDI7 906 aa9.03□□□□□ -0.96
VPS8-211ENST00000452140 SEMA3EO15041 775 aa9.02□□□□□ -0.97
VPS8-211ENST00000452140 POTEB3A0JP26 581 aa9.01□□□□□ -0.97
VPS8-211ENST00000452140 C2orf72A6NCS6 295 aa9.01□□□□□ -0.97
VPS8-211ENST00000452140 POTEBQ6S5H4 581 aa9.01□□□□□ -0.97
VPS8-211ENST00000452140 ZSWIM6Q9HCJ5 1215 aa9.01□□□□□ -0.97
VPS8-211ENST00000452140 ERBB3P21860 1342 aa9.01□□□□□ -0.97
VPS8-211ENST00000452140 CAMK2BQ13554 666 aa9□□□□□ -0.97
VPS8-211ENST00000452140 TMEM92Q6UXU6 159 aa8.98□□□□□ -0.97
VPS8-211ENST00000452140 KRTAP3-3Q9BYR6 98 aa8.98□□□□□ -0.97
VPS8-211ENST00000452140 KRTAP3-2Q9BYR7 98 aa8.98□□□□□ -0.97
VPS8-211ENST00000452140 KIF3CO14782 793 aa8.97□□□□□ -0.97
VPS8-211ENST00000452140 FOXK1P85037 733 aa8.97□□□□□ -0.97
VPS8-211ENST00000452140 LMOD2Q6P5Q4 547 aa8.97□□□□□ -0.97
VPS8-211ENST00000452140 EMILIN3Q9NT22 766 aa8.97□□□□□ -0.97
VPS8-211ENST00000452140 PLPP6Q8IY26 295 aa8.96□□□□□ -0.98
VPS8-211ENST00000452140 TESPA1A2RU30 521 aaPredicted RBP8.95□□□□□ -0.98
VPS8-211ENST00000452140 DPYSL4O14531 572 aa8.95□□□□□ -0.98
VPS8-211ENST00000452140 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.95□□□□□ -0.98
VPS8-211ENST00000452140 ARIH1Q9Y4X5 557 aaPredicted RBP8.94□□□□□ -0.98
VPS8-211ENST00000452140 VARS2Q5ST30 1063 aaKnown RBP8.93□□□□□ -0.98
VPS8-211ENST00000452140 TULP1O00294 542 aaPredicted RBP8.91□□□□□ -0.98
VPS8-211ENST00000452140 GPR153Q6NV75 609 aa8.91□□□□□ -0.98
VPS8-211ENST00000452140 MLLT3P42568 568 aaPredicted RBP8.9□□□□□ -0.98
VPS8-211ENST00000452140 UPF1Q92900 1129 aaKnown RBP eCLIP8.9□□□□□ -0.98
VPS8-211ENST00000452140 PDIA6Q15084 440 aa8.87□□□□□ -0.99
VPS8-211ENST00000452140 ARSIQ5FYB1 569 aa8.87□□□□□ -0.99
VPS8-211ENST00000452140 ZNF687Q8N1G0 1237 aa8.87□□□□□ -0.99
VPS8-211ENST00000452140 MAP3K9P80192 1104 aa8.85□□□□□ -0.99
VPS8-211ENST00000452140 RBM26Q5T8P6 1007 aaKnown RBP8.84□□□□□ -0.99
VPS8-211ENST00000452140 SMYD5Q6GMV2 418 aa8.84□□□□□ -0.99
VPS8-211ENST00000452140 ZC3H15Q8WU90 426 aaKnown RBP8.84□□□□□ -0.99
VPS8-211ENST00000452140 SPDYE16A6NNV3 312 aaPredicted RBP8.83□□□□□ -1
VPS8-211ENST00000452140 OXER1Q8TDS5 423 aa8.82□□□□□ -1
VPS8-211ENST00000452140 ZNF316A6NFI3 1004 aaPredicted RBP8.81□□□□□ -1
VPS8-211ENST00000452140 GRXCR2A6NFK2 248 aa8.8□□□□□ -1
VPS8-211ENST00000452140 PTGER2P43116 358 aa8.8□□□□□ -1
VPS8-211ENST00000452140 RNF166Q96A37 237 aaPredicted RBP8.8□□□□□ -1
VPS8-211ENST00000452140 SLC34A2O95436 690 aa8.79□□□□□ -1
VPS8-211ENST00000452140 MYT1LQ9UL68 1186 aa8.79□□□□□ -1
VPS8-211ENST00000452140 KHSRPQ92945 711 aaKnown RBP eCLIP8.78□□□□□ -1
VPS8-211ENST00000452140 EVI5O60447 810 aa8.77□□□□□ -1.01
VPS8-211ENST00000452140 GPIHBP1Q8IV16 184 aa8.77□□□□□ -1.01
VPS8-211ENST00000452140 DDX12PQ92771 950 aa8.77□□□□□ -1.01
VPS8-211ENST00000452140 NUDT7P0C024 238 aa8.76□□□□□ -1.01
VPS8-211ENST00000452140 ANKRD13DQ6ZTN6 518 aa8.76□□□□□ -1.01
VPS8-211ENST00000452140 TBC1D12O60347 775 aa8.75□□□□□ -1.01
VPS8-211ENST00000452140 PTCD2Q8WV60 388 aaKnown RBP8.75□□□□□ -1.01
VPS8-211ENST00000452140 PCDHGA4Q9Y5G9 962 aa8.75□□□□□ -1.01
VPS8-211ENST00000452140 PBX2P40425 430 aa8.74□□□□□ -1.01
VPS8-211ENST00000452140 SLC24A3Q9HC58 644 aa8.74□□□□□ -1.01
VPS8-211ENST00000452140 ZMYND10O75800 440 aa8.73□□□□□ -1.01
VPS8-211ENST00000452140 OSBPP22059 807 aa8.72□□□□□ -1.01
VPS8-211ENST00000452140 LSM11P83369 360 aaKnown RBP eCLIP8.72□□□□□ -1.01
VPS8-211ENST00000452140 PSDA5PKW4 1024 aaPredicted RBP8.71□□□□□ -1.02
VPS8-211ENST00000452140 PRIM1P49642 420 aaKnown RBP8.71□□□□□ -1.02
VPS8-211ENST00000452140 LHX6Q9UPM6 363 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms