RNA–Protein interactions for RNA: ENST00000452067.1

NUCKS1P1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1 pseudogene 1, humanhuman

BASIC

Gene NUCKS1P1, Length 703 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1P1-201ENST00000452067 KIF3CO14782 793 aa15.13■□□□□ 0.01
NUCKS1P1-201ENST00000452067 C2orf72A6NCS6 295 aa15.1■□□□□ 0.01
NUCKS1P1-201ENST00000452067 CADPS2Q86UW7 1296 aa15.07■□□□□ 0
NUCKS1P1-201ENST00000452067 TMC2Q8TDI7 906 aa15.07■□□□□ 0
NUCKS1P1-201ENST00000452067 CRISPLD2Q9H0B8 497 aa15.05■□□□□ -0
NUCKS1P1-201ENST00000452067 NCKAP5LQ9HCH0 1330 aa15.04■□□□□ -0
NUCKS1P1-201ENST00000452067 GPHNQ9NQX3 736 aaPredicted RBP15.04■□□□□ -0
NUCKS1P1-201ENST00000452067 SNPHO15079 494 aa15.03■□□□□ -0
NUCKS1P1-201ENST00000452067 HOXB3P14651 431 aaPredicted RBP15.01□□□□□ -0.01
NUCKS1P1-201ENST00000452067 PLCB2Q00722 1185 aa15.01□□□□□ -0.01
NUCKS1P1-201ENST00000452067 PDE4AP27815 886 aa14.97□□□□□ -0.01
NUCKS1P1-201ENST00000452067 FOXK1P85037 733 aa14.97□□□□□ -0.01
NUCKS1P1-201ENST00000452067 LCE2DQ5TA82 110 aaPredicted RBP14.97□□□□□ -0.01
NUCKS1P1-201ENST00000452067 FAM163AQ96GL9 167 aaPredicted RBP14.97□□□□□ -0.01
NUCKS1P1-201ENST00000452067 DSG2Q14126 1118 aa14.96□□□□□ -0.01
NUCKS1P1-201ENST00000452067 DOK7Q18PE1 504 aa14.94□□□□□ -0.02
NUCKS1P1-201ENST00000452067 TSHZ2Q9NRE2 1034 aa14.93□□□□□ -0.02
NUCKS1P1-201ENST00000452067 ST18O60284 1047 aa14.92□□□□□ -0.02
NUCKS1P1-201ENST00000452067 MFSD10Q14728 455 aa14.92□□□□□ -0.02
NUCKS1P1-201ENST00000452067 PLPP6Q8IY26 295 aa14.92□□□□□ -0.02
NUCKS1P1-201ENST00000452067 LARP6Q9BRS8 491 aaKnown RBP14.92□□□□□ -0.02
NUCKS1P1-201ENST00000452067 PPP1R15BQ5SWA1 713 aa14.9□□□□□ -0.02
NUCKS1P1-201ENST00000452067 DDX27Q96GQ7 796 aaKnown RBP14.88□□□□□ -0.03
NUCKS1P1-201ENST00000452067 SLC34A2O95436 690 aa14.86□□□□□ -0.03
NUCKS1P1-201ENST00000452067 ZNF710Q8N1W2 664 aa14.86□□□□□ -0.03
NUCKS1P1-201ENST00000452067 RIMBP2O15034 1052 aa14.85□□□□□ -0.03
NUCKS1P1-201ENST00000452067 ZSWIM6Q9HCJ5 1215 aa14.84□□□□□ -0.03
NUCKS1P1-201ENST00000452067 GPR153Q6NV75 609 aa14.81□□□□□ -0.04
NUCKS1P1-201ENST00000452067 HOXB1P14653 301 aaPredicted RBP14.8□□□□□ -0.04
NUCKS1P1-201ENST00000452067 PTCD2Q8WV60 388 aaKnown RBP14.78□□□□□ -0.04
NUCKS1P1-201ENST00000452067 PCDHGA4Q9Y5G9 962 aa14.77□□□□□ -0.05
NUCKS1P1-201ENST00000452067 ARSIQ5FYB1 569 aa14.76□□□□□ -0.05
NUCKS1P1-201ENST00000452067 MARVELD3Q96A59 401 aa14.76□□□□□ -0.05
NUCKS1P1-201ENST00000452067 HAP1P54257 671 aaPredicted RBP14.75□□□□□ -0.05
NUCKS1P1-201ENST00000452067 OXER1Q8TDS5 423 aa14.74□□□□□ -0.05
NUCKS1P1-201ENST00000452067 CAMK2BQ13554 666 aa14.73□□□□□ -0.05
NUCKS1P1-201ENST00000452067 KHSRPQ92945 711 aaKnown RBP eCLIP14.73□□□□□ -0.05
NUCKS1P1-201ENST00000452067 POTEMA6NI47 508 aa14.72□□□□□ -0.05
NUCKS1P1-201ENST00000452067 POTEGQ6S5H5 508 aa14.72□□□□□ -0.05
NUCKS1P1-201ENST00000452067 EMILIN3Q9NT22 766 aa14.71□□□□□ -0.05
NUCKS1P1-201ENST00000452067 EMP3P54852 163 aa14.7□□□□□ -0.06
NUCKS1P1-201ENST00000452067 UPF1Q92900 1129 aaKnown RBP eCLIP14.7□□□□□ -0.06
NUCKS1P1-201ENST00000452067 WDR70Q9NW82 654 aa14.69□□□□□ -0.06
NUCKS1P1-201ENST00000452067 KDM4FA0A1W2PPD8 638 aa14.67□□□□□ -0.06
NUCKS1P1-201ENST00000452067 TBC1D12O60347 775 aa14.66□□□□□ -0.06
NUCKS1P1-201ENST00000452067 NUDT7P0C024 238 aa14.66□□□□□ -0.06
NUCKS1P1-201ENST00000452067 E2F4Q16254 413 aa14.64□□□□□ -0.07
NUCKS1P1-201ENST00000452067 FAM205CA6NFA0 338 aa14.61□□□□□ -0.07
NUCKS1P1-201ENST00000452067 POTEB3A0JP26 581 aa14.6□□□□□ -0.07
NUCKS1P1-201ENST00000452067 POTEBQ6S5H4 581 aa14.6□□□□□ -0.07
NUCKS1P1-201ENST00000452067 ZNF316A6NFI3 1004 aaPredicted RBP14.59□□□□□ -0.07
NUCKS1P1-201ENST00000452067 ERBB3P21860 1342 aa14.59□□□□□ -0.07
NUCKS1P1-201ENST00000452067 MAP3K9P80192 1104 aa14.58□□□□□ -0.08
NUCKS1P1-201ENST00000452067 HS3ST6Q96QI5 342 aa14.58□□□□□ -0.08
NUCKS1P1-201ENST00000452067 KDM2AQ9Y2K7 1162 aa14.58□□□□□ -0.08
NUCKS1P1-201ENST00000452067 DPYSL4O14531 572 aa14.57□□□□□ -0.08
NUCKS1P1-201ENST00000452067 LHX6Q9UPM6 363 aa14.57□□□□□ -0.08
NUCKS1P1-201ENST00000452067 EVI5O60447 810 aa14.55□□□□□ -0.08
NUCKS1P1-201ENST00000452067 VARS2Q5ST30 1063 aaKnown RBP14.55□□□□□ -0.08
NUCKS1P1-201ENST00000452067 ARIH1Q9Y4X5 557 aaPredicted RBP14.55□□□□□ -0.08
NUCKS1P1-201ENST00000452067 VSIG10Q8N0Z9 540 aa14.53□□□□□ -0.08
NUCKS1P1-201ENST00000452067 ANO8Q9HCE9 1232 aaPredicted RBP14.53□□□□□ -0.08
NUCKS1P1-201ENST00000452067 KCNV2Q8TDN2 545 aa14.51□□□□□ -0.09
NUCKS1P1-201ENST00000452067 CDAN1Q8IWY9 1227 aa14.48□□□□□ -0.09
NUCKS1P1-201ENST00000452067 PDIA6Q15084 440 aa14.47□□□□□ -0.09
NUCKS1P1-201ENST00000452067 PSDA5PKW4 1024 aaPredicted RBP14.46□□□□□ -0.09
NUCKS1P1-201ENST00000452067 ARHGEF1Q92888 912 aaKnown RBP14.45□□□□□ -0.1
NUCKS1P1-201ENST00000452067 P3H3Q8IVL6 736 aa14.44□□□□□ -0.1
NUCKS1P1-201ENST00000452067 ZNF687Q8N1G0 1237 aa14.44□□□□□ -0.1
NUCKS1P1-201ENST00000452067 PCDH10Q9P2E7 1040 aa14.44□□□□□ -0.1
NUCKS1P1-201ENST00000452067 SPDYE16A6NNV3 312 aaPredicted RBP14.43□□□□□ -0.1
NUCKS1P1-201ENST00000452067 FOSBP53539 338 aa14.42□□□□□ -0.1
NUCKS1P1-201ENST00000452067 JPH4Q96JJ6 628 aa14.41□□□□□ -0.1
NUCKS1P1-201ENST00000452067 ZNF454Q8N9F8 522 aa14.4□□□□□ -0.1
NUCKS1P1-201ENST00000452067 PTGER2P43116 358 aa14.39□□□□□ -0.11
NUCKS1P1-201ENST00000452067 PPP4R3BQ5MIZ7 849 aa14.39□□□□□ -0.11
NUCKS1P1-201ENST00000452067 KRTAP3-3Q9BYR6 98 aa14.38□□□□□ -0.11
NUCKS1P1-201ENST00000452067 KRTAP3-2Q9BYR7 98 aa14.38□□□□□ -0.11
NUCKS1P1-201ENST00000452067 PCDHGA10Q9Y5H3 936 aa14.36□□□□□ -0.11
NUCKS1P1-201ENST00000452067 POTEEQ6S8J3 1075 aa14.35□□□□□ -0.11
NUCKS1P1-201ENST00000452067 PHF14O94880 888 aa14.34□□□□□ -0.11
NUCKS1P1-201ENST00000452067 DDX12PQ92771 950 aa14.33□□□□□ -0.12
NUCKS1P1-201ENST00000452067 PBX2P40425 430 aa14.32□□□□□ -0.12
NUCKS1P1-201ENST00000452067 ZDHHC16Q969W1 377 aa14.32□□□□□ -0.12
NUCKS1P1-201ENST00000452067 BCL2L12Q9HB09 334 aa14.3□□□□□ -0.12
NUCKS1P1-201ENST00000452067 TYW1BQ6NUM6 668 aa14.29□□□□□ -0.12
NUCKS1P1-201ENST00000452067 EPAS1Q99814 870 aa14.29□□□□□ -0.12
NUCKS1P1-201ENST00000452067 ADAM33Q9BZ11 813 aa14.29□□□□□ -0.12
NUCKS1P1-201ENST00000452067 FBXW7Q969H0 707 aa14.28□□□□□ -0.12
NUCKS1P1-201ENST00000452067 AXIN2Q9Y2T1 843 aa14.28□□□□□ -0.12
NUCKS1P1-201ENST00000452067 CCDC180Q9P1Z9 1646 aa14.27□□□□□ -0.12
NUCKS1P1-201ENST00000452067 ARHGAP33O14559 1287 aa14.27□□□□□ -0.13
NUCKS1P1-201ENST00000452067 GRXCR2A6NFK2 248 aa14.24□□□□□ -0.13
NUCKS1P1-201ENST00000452067 PSEN2P49810 448 aa14.24□□□□□ -0.13
NUCKS1P1-201ENST00000452067 NBR1Q14596 966 aa14.24□□□□□ -0.13
NUCKS1P1-201ENST00000452067 KCNK17Q96T54 332 aa14.24□□□□□ -0.13
NUCKS1P1-201ENST00000452067 MLLT3P42568 568 aaPredicted RBP14.23□□□□□ -0.13
NUCKS1P1-201ENST00000452067 LSM11P83369 360 aaKnown RBP eCLIP14.23□□□□□ -0.13
NUCKS1P1-201ENST00000452067 SEMA3EO15041 775 aa14.22□□□□□ -0.13
NUCKS1P1-201ENST00000452067 SLC24A1O60721 1099 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms