RNA–Protein interactions for RNA: ENST00000451542.5

SMPD4-212, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 796 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-212ENST00000451542 CCNB3Q8WWL7 1395 aa18.91■□□□□ 0.62
SMPD4-212ENST00000451542 MAP3K1Q13233 1512 aa18.9■□□□□ 0.62
SMPD4-212ENST00000451542 SCAPERQ9BY12 1400 aa18.9■□□□□ 0.62
SMPD4-212ENST00000451542 PREX2Q70Z35 1606 aa18.89■□□□□ 0.62
SMPD4-212ENST00000451542 CFDP1Q9UEE9 299 aaPredicted RBP18.87■□□□□ 0.61
SMPD4-212ENST00000451542 CDC42BPBQ9Y5S2 1711 aa18.87■□□□□ 0.61
SMPD4-212ENST00000451542 CDC42BPAQ5VT25 1732 aa18.86■□□□□ 0.61
SMPD4-212ENST00000451542 SUPT6HQ7KZ85 1726 aaKnown RBP18.86■□□□□ 0.61
SMPD4-212ENST00000451542 ZNF777Q9ULD5 760 aaPredicted RBP18.85■□□□□ 0.61
SMPD4-212ENST00000451542 GPATCH8Q9UKJ3 1502 aaKnown RBP18.84■□□□□ 0.61
SMPD4-212ENST00000451542 LRRC9Q6ZRR7 1453 aa18.84■□□□□ 0.61
SMPD4-212ENST00000451542 RICTORQ6R327 1708 aa18.83■□□□□ 0.61
SMPD4-212ENST00000451542 ITSN2Q9NZM3 1697 aa18.83■□□□□ 0.61
SMPD4-212ENST00000451542 AEBP2Q6ZN18 517 aaPredicted RBP18.83■□□□□ 0.6
SMPD4-212ENST00000451542 MAGI2Q86UL8 1455 aa18.83■□□□□ 0.6
SMPD4-212ENST00000451542 POGZQ7Z3K3 1410 aa18.83■□□□□ 0.6
SMPD4-212ENST00000451542 MYT1LQ9UL68 1186 aa18.82■□□□□ 0.6
SMPD4-212ENST00000451542 ZNF518AQ6AHZ1 1483 aa18.82■□□□□ 0.6
SMPD4-212ENST00000451542 PLEKHH2Q8IVE3 1493 aa18.82■□□□□ 0.6
SMPD4-212ENST00000451542 NCOA2Q15596 1464 aa18.81■□□□□ 0.6
SMPD4-212ENST00000451542 FRMPD1Q5SYB0 1578 aa18.81■□□□□ 0.6
SMPD4-212ENST00000451542 ZMYM4Q5VZL5 1548 aa18.79■□□□□ 0.6
SMPD4-212ENST00000451542 ABCC1P33527 1531 aa18.78■□□□□ 0.6
SMPD4-212ENST00000451542 ZFYVE16Q7Z3T8 1539 aa18.77■□□□□ 0.6
SMPD4-212ENST00000451542 KIAA1107Q9UPP5 1409 aa18.76■□□□□ 0.59
SMPD4-212ENST00000451542 AFAP1Q8N556 730 aa18.76■□□□□ 0.59
SMPD4-212ENST00000451542 ARID4BQ4LE39 1312 aaPredicted RBP18.75■□□□□ 0.59
SMPD4-212ENST00000451542 KANK4Q5T7N3 995 aaPredicted RBP18.75■□□□□ 0.59
SMPD4-212ENST00000451542 ARHGEF40Q8TER5 1519 aa18.74■□□□□ 0.59
SMPD4-212ENST00000451542 SAMD9LQ8IVG5 1584 aa18.74■□□□□ 0.59
SMPD4-212ENST00000451542 KDM5CP41229 1560 aa18.72■□□□□ 0.59
SMPD4-212ENST00000451542 HNRNPMP52272 730 aaKnown RBP eCLIP18.72■□□□□ 0.591e-6■■■■□ 22.6
SMPD4-212ENST00000451542 RSPH4AQ5TD94 716 aa18.72■□□□□ 0.59
SMPD4-212ENST00000451542 SYCP2Q9BX26 1530 aa18.71■□□□□ 0.59
SMPD4-212ENST00000451542 TRAPPC8Q9Y2L5 1435 aa18.71■□□□□ 0.59
SMPD4-212ENST00000451542 HECW2Q9P2P5 1572 aa18.71■□□□□ 0.59
SMPD4-212ENST00000451542 MLH3Q9UHC1 1453 aa18.71■□□□□ 0.59
SMPD4-212ENST00000451542 ARHGEF12Q9NZN5 1544 aa18.69■□□□□ 0.58
SMPD4-212ENST00000451542 YEATS2Q9ULM3 1422 aa18.69■□□□□ 0.58
SMPD4-212ENST00000451542 KDM4FA0A1W2PPD8 638 aa18.69■□□□□ 0.58
SMPD4-212ENST00000451542 ATP10AO60312 1499 aa18.69■□□□□ 0.58
SMPD4-212ENST00000451542 SPAG9O60271 1321 aaKnown RBP18.69■□□□□ 0.58
SMPD4-212ENST00000451542 MYOM3Q5VTT5 1437 aa18.67■□□□□ 0.58
SMPD4-212ENST00000451542 MIA2Q96PC5 1412 aa18.67■□□□□ 0.58
SMPD4-212ENST00000451542 C9orf84Q5VXU9 1444 aa18.66■□□□□ 0.58
SMPD4-212ENST00000451542 ZNF644Q9H582 1327 aaPredicted RBP18.66■□□□□ 0.58
SMPD4-212ENST00000451542 CAMSAP2Q08AD1 1489 aa18.65■□□□□ 0.58
SMPD4-212ENST00000451542 TSPY4P0CV99 314 aa18.63■□□□□ 0.57
SMPD4-212ENST00000451542 TSPY10P0CW01 314 aa18.63■□□□□ 0.57
SMPD4-212ENST00000451542 CCDC141Q6ZP82 1450 aa18.61■□□□□ 0.57
SMPD4-212ENST00000451542 MBD5Q9P267 1494 aa18.61■□□□□ 0.57
SMPD4-212ENST00000451542 KIDINS220Q9ULH0 1771 aa18.6■□□□□ 0.57
SMPD4-212ENST00000451542 REREQ9P2R6 1566 aa18.59■□□□□ 0.57
SMPD4-212ENST00000451542 DIP2CQ9Y2E4 1556 aa18.59■□□□□ 0.57
SMPD4-212ENST00000451542 ATP7AQ04656 1500 aa18.59■□□□□ 0.57
SMPD4-212ENST00000451542 RTEL1-TNFRSF6BF6WH68 1400 aa18.59■□□□□ 0.57
SMPD4-212ENST00000451542 BCORL1Q5H9F3 1711 aa18.59■□□□□ 0.57
SMPD4-212ENST00000451542 ABCA6Q8N139 1617 aa18.58■□□□□ 0.56
SMPD4-212ENST00000451542 ARHGEF5Q12774 1597 aa18.58■□□□□ 0.56
SMPD4-212ENST00000451542 MLECQ14165 292 aa18.57■□□□□ 0.56
SMPD4-212ENST00000451542 INO80Q9ULG1 1556 aaPredicted RBP18.56■□□□□ 0.56
SMPD4-212ENST00000451542 ADAMTSL3P82987 1691 aa18.56■□□□□ 0.56
SMPD4-212ENST00000451542 FGD6Q6ZV73 1430 aa18.56■□□□□ 0.56
SMPD4-212ENST00000451542 ESF1Q9H501 851 aaKnown RBP18.55■□□□□ 0.56
SMPD4-212ENST00000451542 AGLP35573 1532 aa18.54■□□□□ 0.56
SMPD4-212ENST00000451542 PTPN23Q9H3S7 1636 aa18.54■□□□□ 0.56
SMPD4-212ENST00000451542 ADGBQ8N7X0 1667 aa18.53■□□□□ 0.56
SMPD4-212ENST00000451542 A2MP01023 1474 aa18.52■□□□□ 0.56
SMPD4-212ENST00000451542 MADDQ8WXG6 1647 aa18.5■□□□□ 0.55
SMPD4-212ENST00000451542 FAM50AQ14320 339 aaKnown RBP18.49■□□□□ 0.55
SMPD4-212ENST00000451542 TCOF1Q13428 1488 aaKnown RBP18.49■□□□□ 0.55
SMPD4-212ENST00000451542 PTPRMP28827 1452 aa18.48■□□□□ 0.55
SMPD4-212ENST00000451542 SIGLEC1Q9BZZ2 1709 aa18.48■□□□□ 0.55
SMPD4-212ENST00000451542 FER1L4A9Z1Z3 1794 aa18.47■□□□□ 0.55
SMPD4-212ENST00000451542 MAST1Q9Y2H9 1570 aa18.47■□□□□ 0.55
SMPD4-212ENST00000451542 DHX29Q7Z478 1369 aaKnown RBP18.47■□□□□ 0.55
SMPD4-212ENST00000451542 RIMS1Q86UR5 1692 aaKnown RBP18.47■□□□□ 0.55
SMPD4-212ENST00000451542 PPARGC1BQ86YN6 1023 aaKnown RBP18.45■□□□□ 0.54
SMPD4-212ENST00000451542 PPP6R1Q9UPN7 881 aa18.45■□□□□ 0.54
SMPD4-212ENST00000451542 SHANK2Q9UPX8 1470 aa18.45■□□□□ 0.54
SMPD4-212ENST00000451542 PLXNC1O60486 1568 aa18.44■□□□□ 0.54
SMPD4-212ENST00000451542 DAPK1P53355 1430 aa18.44■□□□□ 0.54
SMPD4-212ENST00000451542 CNTLNQ9NXG0 1405 aa18.44■□□□□ 0.54
SMPD4-212ENST00000451542 DNMT1P26358 1616 aaKnown RBP18.44■□□□□ 0.54
SMPD4-212ENST00000451542 ABCC5O15440 1437 aa18.43■□□□□ 0.54
SMPD4-212ENST00000451542 GGT6Q6P531 493 aa18.43■□□□□ 0.54
SMPD4-212ENST00000451542 KIF3BO15066 747 aa18.42■□□□□ 0.54
SMPD4-212ENST00000451542 PLPPR3Q6T4P5 718 aa18.41■□□□□ 0.54
SMPD4-212ENST00000451542 ANKRD30AQ9BXX3 1397 aa18.41■□□□□ 0.54
SMPD4-212ENST00000451542 CROCC2H7BZ55 1655 aa18.41■□□□□ 0.54
SMPD4-212ENST00000451542 DUOX2Q9NRD8 1548 aa18.38■□□□□ 0.53
SMPD4-212ENST00000451542 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.37■□□□□ 0.534e-10■■■■■ 33.4
SMPD4-212ENST00000451542 KIF15Q9NS87 1388 aa18.37■□□□□ 0.53
SMPD4-212ENST00000451542 RRP7BPQ9NSQ0 103 aa18.36■□□□□ 0.53
SMPD4-212ENST00000451542 CHIC2Q9UKJ5 165 aa18.36■□□□□ 0.53
SMPD4-212ENST00000451542 EIF2AK4Q9P2K8 1649 aaKnown RBP18.34■□□□□ 0.53
SMPD4-212ENST00000451542 FAM135AQ9P2D6 1515 aa18.33■□□□□ 0.53
SMPD4-212ENST00000451542 SETD1BQ9UPS6 1966 aaKnown RBP18.33■□□□□ 0.53
SMPD4-212ENST00000451542 MROH2AA6NES4 1674 aa18.33■□□□□ 0.52
SMPD4-212ENST00000451542 ERBINQ96RT1 1412 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms