RNA–Protein interactions for RNA: ENST00000450510.2

HOXD8-203, Transcript of homeobox D8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HOXD8, Length 1,268 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8-203ENST00000450510 SUPT6HQ7KZ85 1726 aaKnown RBP27.64■■■□□ 2.02
HOXD8-203ENST00000450510 GPATCH8Q9UKJ3 1502 aaKnown RBP27.63■■■□□ 2.01
HOXD8-203ENST00000450510 KDM6BO15054 1643 aa27.63■■■□□ 2.01
HOXD8-203ENST00000450510 CCNB3Q8WWL7 1395 aa27.62■■■□□ 2.01
HOXD8-203ENST00000450510 PREX2Q70Z35 1606 aa27.62■■■□□ 2.01
HOXD8-203ENST00000450510 NCOA2Q15596 1464 aa27.62■■■□□ 2.01
HOXD8-203ENST00000450510 AKNAQ7Z591 1439 aa27.61■■■□□ 2.01
HOXD8-203ENST00000450510 CDC42BPAQ5VT25 1732 aa27.6■■■□□ 2.01
HOXD8-203ENST00000450510 CDC42BPBQ9Y5S2 1711 aa27.6■■■□□ 2.01
HOXD8-203ENST00000450510 RRBP1Q9P2E9 1410 aaKnown RBP27.59■■■□□ 2.01
HOXD8-203ENST00000450510 COL17A1Q9UMD9 1497 aaPredicted RBP27.59■■■□□ 2.01
HOXD8-203ENST00000450510 ARHGAP5Q13017 1502 aa27.58■■■□□ 2.01
HOXD8-203ENST00000450510 CFDP1Q9UEE9 299 aaPredicted RBP27.54■■■□□ 2
HOXD8-203ENST00000450510 ITSN2Q9NZM3 1697 aa27.52■■■□□ 2
HOXD8-203ENST00000450510 ZEB1P37275 1124 aaPredicted RBP27.52■■■□□ 2
HOXD8-203ENST00000450510 ADGRL1O94910 1474 aa27.51■■■□□ 2
HOXD8-203ENST00000450510 DENND4BO75064 1496 aaPredicted RBP27.5■■□□□ 1.99
HOXD8-203ENST00000450510 SCAPERQ9BY12 1400 aa27.49■■□□□ 1.99
HOXD8-203ENST00000450510 PLEKHH2Q8IVE3 1493 aa27.46■■□□□ 1.99
HOXD8-203ENST00000450510 KIAA1107Q9UPP5 1409 aa27.46■■□□□ 1.99
HOXD8-203ENST00000450510 MIA2Q96PC5 1412 aa27.45■■□□□ 1.98
HOXD8-203ENST00000450510 MYOM3Q5VTT5 1437 aa27.44■■□□□ 1.98
HOXD8-203ENST00000450510 ABCC1P33527 1531 aa27.43■■□□□ 1.98
HOXD8-203ENST00000450510 RAPGEF3O95398 923 aa27.43■■□□□ 1.98
HOXD8-203ENST00000450510 SAMD9LQ8IVG5 1584 aa27.42■■□□□ 1.98
HOXD8-203ENST00000450510 POGZQ7Z3K3 1410 aa27.41■■□□□ 1.98
HOXD8-203ENST00000450510 RICTORQ6R327 1708 aa27.41■■□□□ 1.98
HOXD8-203ENST00000450510 ZNF777Q9ULD5 760 aaPredicted RBP27.41■■□□□ 1.98
HOXD8-203ENST00000450510 FRMPD1Q5SYB0 1578 aa27.39■■□□□ 1.98
HOXD8-203ENST00000450510 ZNF518AQ6AHZ1 1483 aa27.39■■□□□ 1.98
HOXD8-203ENST00000450510 ARHGEF12Q9NZN5 1544 aa27.38■■□□□ 1.97
HOXD8-203ENST00000450510 ZMYM4Q5VZL5 1548 aa27.36■■□□□ 1.97
HOXD8-203ENST00000450510 RSPH4AQ5TD94 716 aa27.36■■□□□ 1.97
HOXD8-203ENST00000450510 MAGI2Q86UL8 1455 aa27.36■■□□□ 1.97
HOXD8-203ENST00000450510 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.35■■□□□ 1.97
HOXD8-203ENST00000450510 ZNF644Q9H582 1327 aaPredicted RBP27.34■■□□□ 1.97
HOXD8-203ENST00000450510 KDM5CP41229 1560 aa27.34■■□□□ 1.97
HOXD8-203ENST00000450510 TRAPPC8Q9Y2L5 1435 aa27.33■■□□□ 1.96
HOXD8-203ENST00000450510 MBD5Q9P267 1494 aa27.32■■□□□ 1.96
HOXD8-203ENST00000450510 SYCP2Q9BX26 1530 aa27.32■■□□□ 1.96
HOXD8-203ENST00000450510 AFAP1Q8N556 730 aa27.32■■□□□ 1.96
HOXD8-203ENST00000450510 CAMSAP2Q08AD1 1489 aa27.32■■□□□ 1.96
HOXD8-203ENST00000450510 HNRNPMP52272 730 aaKnown RBP eCLIP27.31■■□□□ 1.96
HOXD8-203ENST00000450510 FGD6Q6ZV73 1430 aa27.31■■□□□ 1.96
HOXD8-203ENST00000450510 MLH3Q9UHC1 1453 aa27.28■■□□□ 1.96
HOXD8-203ENST00000450510 AEBP2Q6ZN18 517 aaPredicted RBP27.28■■□□□ 1.96
HOXD8-203ENST00000450510 TCOF1Q13428 1488 aaKnown RBP27.25■■□□□ 1.95
HOXD8-203ENST00000450510 ARHGEF5Q12774 1597 aa27.25■■□□□ 1.95
HOXD8-203ENST00000450510 PTPN23Q9H3S7 1636 aa27.24■■□□□ 1.95
HOXD8-203ENST00000450510 CCER1Q8TC90 406 aaPredicted RBP27.22■■□□□ 1.95
HOXD8-203ENST00000450510 HECW2Q9P2P5 1572 aa27.22■■□□□ 1.95
HOXD8-203ENST00000450510 ZFYVE16Q7Z3T8 1539 aa27.21■■□□□ 1.95
HOXD8-203ENST00000450510 CCDC141Q6ZP82 1450 aa27.21■■□□□ 1.95
HOXD8-203ENST00000450510 ARHGEF40Q8TER5 1519 aa27.21■■□□□ 1.95
HOXD8-203ENST00000450510 SPAG9O60271 1321 aaKnown RBP27.2■■□□□ 1.95
HOXD8-203ENST00000450510 RTEL1-TNFRSF6BF6WH68 1400 aa27.2■■□□□ 1.94
HOXD8-203ENST00000450510 YEATS2Q9ULM3 1422 aa27.18■■□□□ 1.94
HOXD8-203ENST00000450510 TSPY4P0CV99 314 aa27.16■■□□□ 1.94
HOXD8-203ENST00000450510 TSPY10P0CW01 314 aa27.16■■□□□ 1.94
HOXD8-203ENST00000450510 ATP10AO60312 1499 aa27.16■■□□□ 1.94
HOXD8-203ENST00000450510 KIDINS220Q9ULH0 1771 aa27.15■■□□□ 1.94
HOXD8-203ENST00000450510 INO80Q9ULG1 1556 aaPredicted RBP27.14■■□□□ 1.93
HOXD8-203ENST00000450510 ATP7AQ04656 1500 aa27.13■■□□□ 1.93
HOXD8-203ENST00000450510 MYT1LQ9UL68 1186 aa27.13■■□□□ 1.93
HOXD8-203ENST00000450510 REREQ9P2R6 1566 aa27.11■■□□□ 1.93
HOXD8-203ENST00000450510 C9orf84Q5VXU9 1444 aa27.1■■□□□ 1.93
HOXD8-203ENST00000450510 DIP2CQ9Y2E4 1556 aa27.09■■□□□ 1.93
HOXD8-203ENST00000450510 MAST1Q9Y2H9 1570 aa27.09■■□□□ 1.93
HOXD8-203ENST00000450510 DNMT1P26358 1616 aaKnown RBP27.09■■□□□ 1.93
HOXD8-203ENST00000450510 ABCC5O15440 1437 aa27.09■■□□□ 1.93
HOXD8-203ENST00000450510 SHANK2Q9UPX8 1470 aa27.08■■□□□ 1.93
HOXD8-203ENST00000450510 FAM50AQ14320 339 aaKnown RBP27.08■■□□□ 1.93
HOXD8-203ENST00000450510 DAPK1P53355 1430 aa27.07■■□□□ 1.92
HOXD8-203ENST00000450510 ABCA6Q8N139 1617 aa27.07■■□□□ 1.92
HOXD8-203ENST00000450510 CLSPNQ9HAW4 1339 aa27.02■■□□□ 1.92
HOXD8-203ENST00000450510 CROCC2H7BZ55 1655 aa27.01■■□□□ 1.92
HOXD8-203ENST00000450510 AGLP35573 1532 aa27.01■■□□□ 1.91
HOXD8-203ENST00000450510 ADGBQ8N7X0 1667 aa27■■□□□ 1.91
HOXD8-203ENST00000450510 A2MP01023 1474 aa26.99■■□□□ 1.91
HOXD8-203ENST00000450510 SETD5Q9C0A6 1442 aa26.99■■□□□ 1.91
HOXD8-203ENST00000450510 DHX29Q7Z478 1369 aaKnown RBP26.98■■□□□ 1.91
HOXD8-203ENST00000450510 PLXNC1O60486 1568 aa26.97■■□□□ 1.91
HOXD8-203ENST00000450510 ARID4BQ4LE39 1312 aaPredicted RBP26.97■■□□□ 1.91
HOXD8-203ENST00000450510 SIGLEC1Q9BZZ2 1709 aa26.95■■□□□ 1.9
HOXD8-203ENST00000450510 ADGRL2O95490 1459 aa26.94■■□□□ 1.9
HOXD8-203ENST00000450510 ITGAEP38570 1179 aa26.94■■□□□ 1.9
HOXD8-203ENST00000450510 ANKRD30AQ9BXX3 1397 aa26.94■■□□□ 1.9
HOXD8-203ENST00000450510 NCOA1Q15788 1441 aa26.92■■□□□ 1.9
HOXD8-203ENST00000450510 BCORL1Q5H9F3 1711 aa26.92■■□□□ 1.9
HOXD8-203ENST00000450510 KDM4FA0A1W2PPD8 638 aa26.91■■□□□ 1.9
HOXD8-203ENST00000450510 ROCK1Q13464 1354 aa26.9■■□□□ 1.9
HOXD8-203ENST00000450510 DHX57Q6P158 1386 aaKnown RBP26.9■■□□□ 1.9
HOXD8-203ENST00000450510 RAB3GAP2Q9H2M9 1393 aa26.9■■□□□ 1.9
HOXD8-203ENST00000450510 PTPRKQ15262 1439 aa26.9■■□□□ 1.9
HOXD8-203ENST00000450510 DUOX2Q9NRD8 1548 aa26.89■■□□□ 1.89
HOXD8-203ENST00000450510 KIF15Q9NS87 1388 aa26.88■■□□□ 1.89
HOXD8-203ENST00000450510 CHIC2Q9UKJ5 165 aa26.88■■□□□ 1.89
HOXD8-203ENST00000450510 ADAMTSL3P82987 1691 aa26.88■■□□□ 1.89
HOXD8-203ENST00000450510 HFM1A2PYH4 1435 aa26.87■■□□□ 1.89
HOXD8-203ENST00000450510 PPP6R1Q9UPN7 881 aa26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms