RNA–Protein interactions for RNA: ENST00000449617.5

SEC22C-209, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 2

Gene SEC22C, Length 1,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-209ENST00000449617 ARHGAP5Q13017 1502 aa21.13■□□□□ 0.97
SEC22C-209ENST00000449617 CEP162Q5TB80 1403 aa21.13■□□□□ 0.97
SEC22C-209ENST00000449617 CDC42BPBQ9Y5S2 1711 aa21.1■□□□□ 0.97
SEC22C-209ENST00000449617 ZFYVE16Q7Z3T8 1539 aa21.1■□□□□ 0.97
SEC22C-209ENST00000449617 PREX2Q70Z35 1606 aa21.1■□□□□ 0.97
SEC22C-209ENST00000449617 ADAMTSL3P82987 1691 aa21.09■□□□□ 0.97
SEC22C-209ENST00000449617 YEATS2Q9ULM3 1422 aa21.09■□□□□ 0.97
SEC22C-209ENST00000449617 BCORL1Q5H9F3 1711 aa21.08■□□□□ 0.97
SEC22C-209ENST00000449617 MAGI2Q86UL8 1455 aa21.08■□□□□ 0.96
SEC22C-209ENST00000449617 ARID4BQ4LE39 1312 aaPredicted RBP21.07■□□□□ 0.96
SEC22C-209ENST00000449617 CDC42BPAQ5VT25 1732 aa21.06■□□□□ 0.96
SEC22C-209ENST00000449617 ZNF518AQ6AHZ1 1483 aa21.04■□□□□ 0.96
SEC22C-209ENST00000449617 SIGLEC1Q9BZZ2 1709 aa21.04■□□□□ 0.96
SEC22C-209ENST00000449617 MADDQ8WXG6 1647 aa21.03■□□□□ 0.96
SEC22C-209ENST00000449617 KDM5CP41229 1560 aa21.02■□□□□ 0.96
SEC22C-209ENST00000449617 ABCC1P33527 1531 aa21.01■□□□□ 0.95
SEC22C-209ENST00000449617 LOC105371045A0A1W2PR82 267 aa21.01■□□□□ 0.95
SEC22C-209ENST00000449617 PTPRMP28827 1452 aa21■□□□□ 0.95
SEC22C-209ENST00000449617 HECW2Q9P2P5 1572 aa21■□□□□ 0.95
SEC22C-209ENST00000449617 ITSN2Q9NZM3 1697 aa20.98■□□□□ 0.95
SEC22C-209ENST00000449617 MTUS2Q5JR59 1369 aa20.98■□□□□ 0.95
SEC22C-209ENST00000449617 AFAP1Q8N556 730 aa20.98■□□□□ 0.95
SEC22C-209ENST00000449617 ARHGEF12Q9NZN5 1544 aa20.98■□□□□ 0.95
SEC22C-209ENST00000449617 GPATCH8Q9UKJ3 1502 aaKnown RBP20.97■□□□□ 0.95
SEC22C-209ENST00000449617 ATP10AO60312 1499 aa20.97■□□□□ 0.95
SEC22C-209ENST00000449617 RIMS1Q86UR5 1692 aaKnown RBP20.96■□□□□ 0.95
SEC22C-209ENST00000449617 C9orf84Q5VXU9 1444 aa20.95■□□□□ 0.94
SEC22C-209ENST00000449617 TRAPPC8Q9Y2L5 1435 aa20.95■□□□□ 0.94
SEC22C-209ENST00000449617 EHBP1L1Q8N3D4 1523 aa20.95■□□□□ 0.94
SEC22C-209ENST00000449617 SAMD9LQ8IVG5 1584 aa20.94■□□□□ 0.94
SEC22C-209ENST00000449617 DIP2CQ9Y2E4 1556 aa20.93■□□□□ 0.94
SEC22C-209ENST00000449617 CCNB3Q8WWL7 1395 aa20.92■□□□□ 0.94
SEC22C-209ENST00000449617 ABCA6Q8N139 1617 aa20.91■□□□□ 0.94
SEC22C-209ENST00000449617 MLH3Q9UHC1 1453 aa20.91■□□□□ 0.94
SEC22C-209ENST00000449617 MYT1LQ9UL68 1186 aa20.91■□□□□ 0.94
SEC22C-209ENST00000449617 ZNF777Q9ULD5 760 aaPredicted RBP20.91■□□□□ 0.94
SEC22C-209ENST00000449617 SYCP2Q9BX26 1530 aa20.91■□□□□ 0.94
SEC22C-209ENST00000449617 TIAM1Q13009 1591 aa20.9■□□□□ 0.94
SEC22C-209ENST00000449617 FER1L4A9Z1Z3 1794 aa20.89■□□□□ 0.94
SEC22C-209ENST00000449617 MLECQ14165 292 aa20.89■□□□□ 0.94
SEC22C-209ENST00000449617 VPS8Q8N3P4 1428 aa20.88■□□□□ 0.93
SEC22C-209ENST00000449617 CFDP1Q9UEE9 299 aaPredicted RBP20.87■□□□□ 0.93
SEC22C-209ENST00000449617 KIDINS220Q9ULH0 1771 aa20.87■□□□□ 0.93
SEC22C-209ENST00000449617 REREQ9P2R6 1566 aa20.87■□□□□ 0.93
SEC22C-209ENST00000449617 PLEKHH2Q8IVE3 1493 aa20.84■□□□□ 0.93
SEC22C-209ENST00000449617 KIAA1107Q9UPP5 1409 aa20.84■□□□□ 0.93
SEC22C-209ENST00000449617 SUPT6HQ7KZ85 1726 aaKnown RBP20.83■□□□□ 0.93
SEC22C-209ENST00000449617 HNRNPMP52272 730 aaKnown RBP eCLIP20.83■□□□□ 0.93
SEC22C-209ENST00000449617 NCOA2Q15596 1464 aa20.8■□□□□ 0.92
SEC22C-209ENST00000449617 PLPPR3Q6T4P5 718 aa20.8■□□□□ 0.92
SEC22C-209ENST00000449617 SPAG9O60271 1321 aaKnown RBP20.79■□□□□ 0.92
SEC22C-209ENST00000449617 AGLP35573 1532 aa20.79■□□□□ 0.92
SEC22C-209ENST00000449617 ZNF644Q9H582 1327 aaPredicted RBP20.78■□□□□ 0.92
SEC22C-209ENST00000449617 ATP7AQ04656 1500 aa20.78■□□□□ 0.92
SEC22C-209ENST00000449617 INO80Q9ULG1 1556 aaPredicted RBP20.78■□□□□ 0.92
SEC22C-209ENST00000449617 LMTK3Q96Q04 1460 aa20.77■□□□□ 0.92
SEC22C-209ENST00000449617 LRRC9Q6ZRR7 1453 aa20.76■□□□□ 0.91
SEC22C-209ENST00000449617 MBD5Q9P267 1494 aa20.74■□□□□ 0.91
SEC22C-209ENST00000449617 MAP3K1Q13233 1512 aa20.73■□□□□ 0.91
SEC22C-209ENST00000449617 CAMSAP2Q08AD1 1489 aa20.71■□□□□ 0.91
SEC22C-209ENST00000449617 PLXNC1O60486 1568 aa20.7■□□□□ 0.9
SEC22C-209ENST00000449617 CEBPAP49715 358 aaPredicted RBP20.7■□□□□ 0.9
SEC22C-209ENST00000449617 KANK4Q5T7N3 995 aaPredicted RBP20.69■□□□□ 0.9
SEC22C-209ENST00000449617 A2MP01023 1474 aa20.68■□□□□ 0.9
SEC22C-209ENST00000449617 ADGBQ8N7X0 1667 aa20.68■□□□□ 0.9
SEC22C-209ENST00000449617 CCDC141Q6ZP82 1450 aa20.67■□□□□ 0.9
SEC22C-209ENST00000449617 C3P01024 1663 aa20.66■□□□□ 0.9
SEC22C-209ENST00000449617 PREX1Q8TCU6 1659 aa20.66■□□□□ 0.9
SEC22C-209ENST00000449617 HSPA2P54652 639 aa20.65■□□□□ 0.9
SEC22C-209ENST00000449617 RTEL1-TNFRSF6BF6WH68 1400 aa20.65■□□□□ 0.9
SEC22C-209ENST00000449617 ESF1Q9H501 851 aaKnown RBP20.64■□□□□ 0.89
SEC22C-209ENST00000449617 CNTLNQ9NXG0 1405 aa20.63■□□□□ 0.89
SEC22C-209ENST00000449617 ARHGEF5Q12774 1597 aa20.62■□□□□ 0.89
SEC22C-209ENST00000449617 SETD1BQ9UPS6 1966 aaKnown RBP20.61■□□□□ 0.89
SEC22C-209ENST00000449617 MROH2AA6NES4 1674 aa20.6■□□□□ 0.89
SEC22C-209ENST00000449617 MYOM3Q5VTT5 1437 aa20.6■□□□□ 0.89
SEC22C-209ENST00000449617 RSPH4AQ5TD94 716 aa20.59■□□□□ 0.89
SEC22C-209ENST00000449617 CLTCQ00610 1675 aaKnown RBP20.58■□□□□ 0.89
SEC22C-209ENST00000449617 APLP2Q06481 763 aa20.58■□□□□ 0.88
SEC22C-209ENST00000449617 UHRF1BP1Q6BDS2 1440 aa20.57■□□□□ 0.88
SEC22C-209ENST00000449617 DHX29Q7Z478 1369 aaKnown RBP20.56■□□□□ 0.88
SEC22C-209ENST00000449617 MIA2Q96PC5 1412 aa20.56■□□□□ 0.88
SEC22C-209ENST00000449617 GGT6Q6P531 493 aa20.55■□□□□ 0.88
SEC22C-209ENST00000449617 ZMYM3Q14202 1370 aa20.53■□□□□ 0.88
SEC22C-209ENST00000449617 MAST1Q9Y2H9 1570 aa20.52■□□□□ 0.88
SEC22C-209ENST00000449617 TSPY4P0CV99 314 aa20.52■□□□□ 0.87
SEC22C-209ENST00000449617 TSPY10P0CW01 314 aa20.52■□□□□ 0.87
SEC22C-209ENST00000449617 NPATQ14207 1427 aa20.51■□□□□ 0.87
SEC22C-209ENST00000449617 ILDR1Q86SU0 546 aaPredicted RBP20.5■□□□□ 0.87
SEC22C-209ENST00000449617 PTPN23Q9H3S7 1636 aa20.49■□□□□ 0.87
SEC22C-209ENST00000449617 KIF3BO15066 747 aa20.48■□□□□ 0.87
SEC22C-209ENST00000449617 PPP6R1Q9UPN7 881 aa20.48■□□□□ 0.87
SEC22C-209ENST00000449617 STRCQ7RTU9 1775 aa20.48■□□□□ 0.87
SEC22C-209ENST00000449617 PTPRKQ15262 1439 aa20.45■□□□□ 0.86
SEC22C-209ENST00000449617 FGD6Q6ZV73 1430 aa20.45■□□□□ 0.86
SEC22C-209ENST00000449617 CROCC2H7BZ55 1655 aa20.45■□□□□ 0.86
SEC22C-209ENST00000449617 KDM5DQ9BY66 1539 aa20.44■□□□□ 0.86
SEC22C-209ENST00000449617 MYO3AQ8NEV4 1616 aa20.44■□□□□ 0.86
SEC22C-209ENST00000449617 FAM135AQ9P2D6 1515 aa20.43■□□□□ 0.86
SEC22C-209ENST00000449617 TCOF1Q13428 1488 aaKnown RBP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms