RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 SETD1BQ9UPS6 1966 aaKnown RBP21.78■■□□□ 1.08
AC004540.1-204ENST00000449537 IQSEC2Q5JU85 1478 aa21.77■■□□□ 1.07
AC004540.1-204ENST00000449537 ARHGEF12Q9NZN5 1544 aa21.75■■□□□ 1.07
AC004540.1-204ENST00000449537 CFAP74Q9C0B2 1584 aa21.74■■□□□ 1.07
AC004540.1-204ENST00000449537 LTBP4Q8N2S1 1624 aa21.74■■□□□ 1.07
AC004540.1-204ENST00000449537 RAPGEF6Q8TEU7 1601 aa21.73■■□□□ 1.07
AC004540.1-204ENST00000449537 ATP10AO60312 1499 aa21.73■■□□□ 1.07
AC004540.1-204ENST00000449537 HECW1Q76N89 1606 aa21.72■■□□□ 1.07
AC004540.1-204ENST00000449537 UBAP1LF5GYI3 381 aa21.71■■□□□ 1.07
AC004540.1-204ENST00000449537 SCAPERQ9BY12 1400 aa21.69■■□□□ 1.06
AC004540.1-204ENST00000449537 C9orf84Q5VXU9 1444 aa21.68■■□□□ 1.06
AC004540.1-204ENST00000449537 NUP153P49790 1475 aaKnown RBP21.68■■□□□ 1.06
AC004540.1-204ENST00000449537 PRXQ9BXM0 1461 aa21.68■■□□□ 1.06
AC004540.1-204ENST00000449537 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.65■■□□□ 1.06
AC004540.1-204ENST00000449537 ESF1Q9H501 851 aaKnown RBP21.61■■□□□ 1.05
AC004540.1-204ENST00000449537 SAMD9Q5K651 1589 aa21.58■■□□□ 1.05
AC004540.1-204ENST00000449537 PLCH2O75038 1416 aa21.57■■□□□ 1.04
AC004540.1-204ENST00000449537 NCOA1Q15788 1441 aa21.57■■□□□ 1.04
AC004540.1-204ENST00000449537 TRAPPC8Q9Y2L5 1435 aa21.57■■□□□ 1.04
AC004540.1-204ENST00000449537 EFCAB2Q5VUJ9 269 aa21.57■■□□□ 1.04
AC004540.1-204ENST00000449537 MYT1LQ9UL68 1186 aa21.57■■□□□ 1.04
AC004540.1-204ENST00000449537 ZNF335Q9H4Z2 1342 aaPredicted RBP21.55■■□□□ 1.04
AC004540.1-204ENST00000449537 RANGAP1P46060 587 aaPredicted RBP21.54■■□□□ 1.04
AC004540.1-204ENST00000449537 AFAP1Q8N556 730 aa21.52■■□□□ 1.04
AC004540.1-204ENST00000449537 C3P01024 1663 aa21.51■■□□□ 1.03
AC004540.1-204ENST00000449537 HSPA1LP34931 641 aa21.51■■□□□ 1.03
AC004540.1-204ENST00000449537 NCKAP5LQ9HCH0 1330 aa21.51■■□□□ 1.03
AC004540.1-204ENST00000449537 SCAF1Q9H7N4 1312 aaKnown RBP21.49■■□□□ 1.03
AC004540.1-204ENST00000449537 MED1Q15648 1581 aaPredicted RBP21.48■■□□□ 1.03
AC004540.1-204ENST00000449537 PHF23Q9BUL5 403 aaPredicted RBP21.48■■□□□ 1.03
AC004540.1-204ENST00000449537 CAMSAP1Q5T5Y3 1602 aa21.46■■□□□ 1.03
AC004540.1-204ENST00000449537 ZNF518AQ6AHZ1 1483 aa21.45■■□□□ 1.03
AC004540.1-204ENST00000449537 PIP4K2BP78356 416 aa21.45■■□□□ 1.02
AC004540.1-204ENST00000449537 PKD2Q13563 968 aa21.44■■□□□ 1.02
AC004540.1-204ENST00000449537 TOM1O60784 492 aa21.42■■□□□ 1.02
AC004540.1-204ENST00000449537 CNTLNQ9NXG0 1405 aa21.4■■□□□ 1.02
AC004540.1-204ENST00000449537 CSRNP3Q8WYN3 585 aa21.39■■□□□ 1.01
AC004540.1-204ENST00000449537 REREQ9P2R6 1566 aa21.39■■□□□ 1.01
AC004540.1-204ENST00000449537 AGLP35573 1532 aa21.39■■□□□ 1.01
AC004540.1-204ENST00000449537 DIP2CQ9Y2E4 1556 aa21.38■■□□□ 1.01
AC004540.1-204ENST00000449537 NPATQ14207 1427 aa21.38■■□□□ 1.01
AC004540.1-204ENST00000449537 KDM5CP41229 1560 aa21.37■■□□□ 1.01
AC004540.1-204ENST00000449537 MYO5CQ9NQX4 1742 aa21.35■■□□□ 1.01
AC004540.1-204ENST00000449537 CDK13Q14004 1512 aaKnown RBP21.35■■□□□ 1.01
AC004540.1-204ENST00000449537 PPP6R1Q9UPN7 881 aa21.35■■□□□ 1.01
AC004540.1-204ENST00000449537 MLH3Q9UHC1 1453 aa21.34■■□□□ 1.01
AC004540.1-204ENST00000449537 ATP1B4Q9UN42 357 aaPredicted RBP21.34■■□□□ 1.01
AC004540.1-204ENST00000449537 CDK11AQ9UQ88 783 aaPredicted RBP21.34■■□□□ 1.01
AC004540.1-204ENST00000449537 ZMYM3Q14202 1370 aa21.34■■□□□ 1.01
AC004540.1-204ENST00000449537 PLA2R1Q13018 1463 aa21.31■■□□□ 1
AC004540.1-204ENST00000449537 ARHGAP5Q13017 1502 aa21.3■■□□□ 1
AC004540.1-204ENST00000449537 ABCA6Q8N139 1617 aa21.29■■□□□ 1
AC004540.1-204ENST00000449537 TCOF1Q13428 1488 aaKnown RBP21.27■■□□□ 1
AC004540.1-204ENST00000449537 MROH2AA6NES4 1674 aa21.22■□□□□ 0.99
AC004540.1-204ENST00000449537 SUPT6HQ7KZ85 1726 aaKnown RBP21.21■□□□□ 0.99
AC004540.1-204ENST00000449537 CPS1P31327 1500 aa21.2■□□□□ 0.98
AC004540.1-204ENST00000449537 KIF14Q15058 1648 aa21.2■□□□□ 0.98
AC004540.1-204ENST00000449537 PTPRKQ15262 1439 aa21.19■□□□□ 0.98
AC004540.1-204ENST00000449537 CEP170BQ9Y4F5 1589 aaPredicted RBP21.19■□□□□ 0.98
AC004540.1-204ENST00000449537 TROQ12816 1431 aaPredicted RBP21.18■□□□□ 0.98
AC004540.1-204ENST00000449537 ZNF142P52746 1687 aaPredicted RBP21.18■□□□□ 0.98
AC004540.1-204ENST00000449537 SENP3Q9H4L4 574 aaPredicted RBP21.17■□□□□ 0.98
AC004540.1-204ENST00000449537 SHANK2Q9UPX8 1470 aa21.17■□□□□ 0.98
AC004540.1-204ENST00000449537 KIDINS220Q9ULH0 1771 aa21.16■□□□□ 0.98
AC004540.1-204ENST00000449537 MYO3AQ8NEV4 1616 aa21.16■□□□□ 0.98
AC004540.1-204ENST00000449537 CLIP1P30622 1438 aa21.16■□□□□ 0.98
AC004540.1-204ENST00000449537 RGS17Q9UGC6 210 aaPredicted RBP21.16■□□□□ 0.98
AC004540.1-204ENST00000449537 CDC42BPBQ9Y5S2 1711 aa21.13■□□□□ 0.97
AC004540.1-204ENST00000449537 ABCC1P33527 1531 aa21.11■□□□□ 0.97
AC004540.1-204ENST00000449537 GGT6Q6P531 493 aa21.11■□□□□ 0.97
AC004540.1-204ENST00000449537 FMN1Q68DA7 1419 aa21.11■□□□□ 0.97
AC004540.1-204ENST00000449537 CLTCQ00610 1675 aaKnown RBP21.1■□□□□ 0.97
AC004540.1-204ENST00000449537 SPAG9O60271 1321 aaKnown RBP21.08■□□□□ 0.97
AC004540.1-204ENST00000449537 A2ML1A8K2U0 1454 aa21.08■□□□□ 0.97
AC004540.1-204ENST00000449537 ANKLE2Q86XL3 938 aa21.08■□□□□ 0.97
AC004540.1-204ENST00000449537 ITSN2Q9NZM3 1697 aa21.08■□□□□ 0.96
AC004540.1-204ENST00000449537 DNMT1P26358 1616 aaKnown RBP21.05■□□□□ 0.96
AC004540.1-204ENST00000449537 ALKQ9UM73 1620 aa21.05■□□□□ 0.96
AC004540.1-204ENST00000449537 ZNF777Q9ULD5 760 aaPredicted RBP21.05■□□□□ 0.96
AC004540.1-204ENST00000449537 SAMD9LQ8IVG5 1584 aa21.02■□□□□ 0.96
AC004540.1-204ENST00000449537 PREX2Q70Z35 1606 aa21.02■□□□□ 0.96
AC004540.1-204ENST00000449537 EEA1Q15075 1411 aa21.02■□□□□ 0.96
AC004540.1-204ENST00000449537 HNRNPMP52272 730 aaKnown RBP eCLIP21.01■□□□□ 0.95
AC004540.1-204ENST00000449537 POTEAQ6S8J7 498 aa21.01■□□□□ 0.95
AC004540.1-204ENST00000449537 THEMISQ8N1K5 641 aaPredicted RBP21■□□□□ 0.95
AC004540.1-204ENST00000449537 NEURL4Q96JN8 1562 aa21■□□□□ 0.95
AC004540.1-204ENST00000449537 POLR1AO95602 1720 aaPredicted RBP21■□□□□ 0.95
AC004540.1-204ENST00000449537 VWDEQ8N2E2 1590 aa20.99■□□□□ 0.95
AC004540.1-204ENST00000449537 A2MP01023 1474 aa20.99■□□□□ 0.95
AC004540.1-204ENST00000449537 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.97■□□□□ 0.95
AC004540.1-204ENST00000449537 FBXO31Q5XUX0 539 aaPredicted RBP20.96■□□□□ 0.95
AC004540.1-204ENST00000449537 TNRQ92752 1358 aa20.96■□□□□ 0.95
AC004540.1-204ENST00000449537 NPHP4O75161 1426 aaPredicted RBP20.95■□□□□ 0.94
AC004540.1-204ENST00000449537 UBTFP17480 764 aaKnown RBP20.94■□□□□ 0.94
AC004540.1-204ENST00000449537 ATP7AQ04656 1500 aa20.93■□□□□ 0.94
AC004540.1-204ENST00000449537 PLXNC1O60486 1568 aa20.93■□□□□ 0.94
AC004540.1-204ENST00000449537 LRRC7Q96NW7 1537 aa20.92■□□□□ 0.94
AC004540.1-204ENST00000449537 MED14O60244 1454 aa20.91■□□□□ 0.94
AC004540.1-204ENST00000449537 ARHGAP35Q9NRY4 1499 aa20.91■□□□□ 0.94
AC004540.1-204ENST00000449537 CDC42BPAQ5VT25 1732 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms