RNA–Protein interactions for RNA: ENST00000448926.5

LMBR1-212, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 3,629 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-212ENST00000448926 RAPGEF6Q8TEU7 1601 aa5.96□□□□□ -1.45
LMBR1-212ENST00000448926 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.96□□□□□ -1.462e-6■□□□□ 10.4
LMBR1-212ENST00000448926 L3MBTL2Q969R5 705 aa5.96□□□□□ -1.46
LMBR1-212ENST00000448926 ARHGEF11O15085 1522 aa5.96□□□□□ -1.46
LMBR1-212ENST00000448926 PLEKHD1A6NEE1 506 aa5.95□□□□□ -1.46
LMBR1-212ENST00000448926 DENND4BO75064 1496 aaPredicted RBP5.95□□□□□ -1.46
LMBR1-212ENST00000448926 BCANQ96GW7 911 aa5.95□□□□□ -1.46
LMBR1-212ENST00000448926 CDK11AQ9UQ88 783 aaPredicted RBP5.95□□□□□ -1.46
LMBR1-212ENST00000448926 MAGI1Q96QZ7 1491 aaPredicted RBP5.95□□□□□ -1.46
LMBR1-212ENST00000448926 ABCC5O15440 1437 aa5.95□□□□□ -1.46
LMBR1-212ENST00000448926 KDM2AQ9Y2K7 1162 aa5.95□□□□□ -1.46
LMBR1-212ENST00000448926 UACAQ9BZF9 1416 aa5.94□□□□□ -1.46
LMBR1-212ENST00000448926 SENP3Q9H4L4 574 aaPredicted RBP5.94□□□□□ -1.46
LMBR1-212ENST00000448926 DAPK1P53355 1430 aa5.94□□□□□ -1.46
LMBR1-212ENST00000448926 CHD1O14646 1710 aa5.94□□□□□ -1.46
LMBR1-212ENST00000448926 NBPF8Q3BBV2 869 aa5.94□□□□□ -1.46
LMBR1-212ENST00000448926 PTPRGP23470 1445 aa5.94□□□□□ -1.46
LMBR1-212ENST00000448926 C11orf95C9JLR9 678 aaPredicted RBP5.93□□□□□ -1.46
LMBR1-212ENST00000448926 HSPA5P11021 654 aaKnown RBP5.93□□□□□ -1.46
LMBR1-212ENST00000448926 CARMIL2Q6F5E8 1435 aa5.93□□□□□ -1.46
LMBR1-212ENST00000448926 ATP10BO94823 1461 aa5.93□□□□□ -1.46
LMBR1-212ENST00000448926 PKD2Q13563 968 aa5.93□□□□□ -1.46
LMBR1-212ENST00000448926 NUP160Q12769 1436 aa5.93□□□□□ -1.46
LMBR1-212ENST00000448926 CAMSAP2Q08AD1 1489 aa5.93□□□□□ -1.46
LMBR1-212ENST00000448926 TROQ12816 1431 aaPredicted RBP5.92□□□□□ -1.46
LMBR1-212ENST00000448926 GPATCH8Q9UKJ3 1502 aaKnown RBP5.92□□□□□ -1.46
LMBR1-212ENST00000448926 RGL3Q3MIN7 710 aa5.92□□□□□ -1.46
LMBR1-212ENST00000448926 MYT1LQ9UL68 1186 aa5.92□□□□□ -1.46
LMBR1-212ENST00000448926 CCDC184Q52MB2 194 aa5.91□□□□□ -1.46
LMBR1-212ENST00000448926 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.9□□□□□ -1.46
LMBR1-212ENST00000448926 TCOF1Q13428 1488 aaKnown RBP5.9□□□□□ -1.46
LMBR1-212ENST00000448926 NUP155O75694 1391 aa5.89□□□□□ -1.47
LMBR1-212ENST00000448926 PLPPR3Q6T4P5 718 aa5.89□□□□□ -1.47
LMBR1-212ENST00000448926 WASHC2AQ641Q2 1341 aa5.89□□□□□ -1.47
LMBR1-212ENST00000448926 TSPY4P0CV99 314 aa5.89□□□□□ -1.47
LMBR1-212ENST00000448926 TSPY10P0CW01 314 aa5.89□□□□□ -1.47
LMBR1-212ENST00000448926 IRX6P78412 446 aaPredicted RBP5.89□□□□□ -1.47
LMBR1-212ENST00000448926 MIA2Q96PC5 1412 aa5.88□□□□□ -1.47
LMBR1-212ENST00000448926 KDM5BQ9UGL1 1544 aa5.88□□□□□ -1.47
LMBR1-212ENST00000448926 ANP32CO43423 234 aa5.88□□□□□ -1.47
LMBR1-212ENST00000448926 NCOA1Q15788 1441 aa5.88□□□□□ -1.47
LMBR1-212ENST00000448926 DNMT1P26358 1616 aaKnown RBP5.88□□□□□ -1.47
LMBR1-212ENST00000448926 CDC42BPAQ5VT25 1732 aa5.88□□□□□ -1.47
LMBR1-212ENST00000448926 GCC2Q8IWJ2 1684 aa5.87□□□□□ -1.47
LMBR1-212ENST00000448926 AFAP1Q8N556 730 aa5.87□□□□□ -1.47
LMBR1-212ENST00000448926 AKNAQ7Z591 1439 aa5.87□□□□□ -1.47
LMBR1-212ENST00000448926 ABCA8O94911 1581 aa5.87□□□□□ -1.47
LMBR1-212ENST00000448926 ANKRD30BQ9BXX2 1392 aa5.87□□□□□ -1.47
LMBR1-212ENST00000448926 C9orf84Q5VXU9 1444 aa5.87□□□□□ -1.47
LMBR1-212ENST00000448926 DCAF11Q8TEB1 546 aa5.86□□□□□ -1.47
LMBR1-212ENST00000448926 ANKRD50Q9ULJ7 1429 aa5.86□□□□□ -1.47
LMBR1-212ENST00000448926 PZPP20742 1482 aa5.86□□□□□ -1.47
LMBR1-212ENST00000448926 KIF15Q9NS87 1388 aa5.86□□□□□ -1.47
LMBR1-212ENST00000448926 EIF4G2P78344 907 aaKnown RBP eCLIP5.86□□□□□ -1.47
LMBR1-212ENST00000448926 FAM9BQ8IZU0 186 aa5.86□□□□□ -1.47
LMBR1-212ENST00000448926 TTC37Q6PGP7 1564 aa5.85□□□□□ -1.47
LMBR1-212ENST00000448926 ABCC10Q5T3U5 1492 aa5.85□□□□□ -1.47
LMBR1-212ENST00000448926 ARHGAP5Q13017 1502 aa5.85□□□□□ -1.47
LMBR1-212ENST00000448926 ANKRD30AQ9BXX3 1397 aa5.85□□□□□ -1.47
LMBR1-212ENST00000448926 SYCP2Q9BX26 1530 aa5.85□□□□□ -1.47
LMBR1-212ENST00000448926 HNRNPUQ00839 825 aaKnown RBP eCLIP5.84□□□□□ -1.47
LMBR1-212ENST00000448926 KCNA4P22459 653 aa5.84□□□□□ -1.48
LMBR1-212ENST00000448926 FKBP8Q14318 412 aa5.83□□□□□ -1.48
LMBR1-212ENST00000448926 NBPF1Q3BBV0 1214 aa5.83□□□□□ -1.48
LMBR1-212ENST00000448926 SUPT16HQ9Y5B9 1047 aaKnown RBP5.83□□□□□ -1.48
LMBR1-212ENST00000448926 SAMD9LQ8IVG5 1584 aa5.83□□□□□ -1.48
LMBR1-212ENST00000448926 CDC42BPBQ9Y5S2 1711 aa5.83□□□□□ -1.48
LMBR1-212ENST00000448926 KIF7Q2M1P5 1343 aa5.83□□□□□ -1.48
LMBR1-212ENST00000448926 SALL2Q9Y467 1007 aaPredicted RBP5.83□□□□□ -1.48
LMBR1-212ENST00000448926 ITSN2Q9NZM3 1697 aa5.83□□□□□ -1.48
LMBR1-212ENST00000448926 ROCK1Q13464 1354 aa5.82□□□□□ -1.48
LMBR1-212ENST00000448926 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.82□□□□□ -1.48
LMBR1-212ENST00000448926 ARHGEF12Q9NZN5 1544 aa5.82□□□□□ -1.48
LMBR1-212ENST00000448926 PLEKHH2Q8IVE3 1493 aa5.82□□□□□ -1.48
LMBR1-212ENST00000448926 CARD11Q9BXL7 1154 aa5.82□□□□□ -1.48
LMBR1-212ENST00000448926 TEX14Q8IWB6 1497 aa5.82□□□□□ -1.48
LMBR1-212ENST00000448926 TIMELESSQ9UNS1 1208 aa5.82□□□□□ -1.48
LMBR1-212ENST00000448926 RPRD2Q5VT52 1461 aaKnown RBP5.82□□□□□ -1.48
LMBR1-212ENST00000448926 ST20-MTHFSA0A0A6YYL1 179 aa5.81□□□□□ -1.48
LMBR1-212ENST00000448926 MBD5Q9P267 1494 aa5.81□□□□□ -1.48
LMBR1-212ENST00000448926 TRAPPC8Q9Y2L5 1435 aa5.81□□□□□ -1.48
LMBR1-212ENST00000448926 NUTM2DQ5VT03 806 aaPredicted RBP5.81□□□□□ -1.48
LMBR1-212ENST00000448926 KIAA1107Q9UPP5 1409 aa5.81□□□□□ -1.48
LMBR1-212ENST00000448926 MRS2Q9HD23 443 aa5.8□□□□□ -1.48
LMBR1-212ENST00000448926 USP47Q96K76 1375 aa5.8□□□□□ -1.48
LMBR1-212ENST00000448926 CCDC7Q96M83 1385 aa5.8□□□□□ -1.48
LMBR1-212ENST00000448926 ABCC2Q92887 1545 aa5.8□□□□□ -1.48
LMBR1-212ENST00000448926 CROCC2H7BZ55 1655 aa5.8□□□□□ -1.48
LMBR1-212ENST00000448926 ADCY10Q96PN6 1610 aa5.8□□□□□ -1.48
LMBR1-212ENST00000448926 ADGBQ8N7X0 1667 aa5.8□□□□□ -1.48
LMBR1-212ENST00000448926 CFAP65Q6ZU64 1925 aaKnown RBP5.8□□□□□ -1.48
LMBR1-212ENST00000448926 SLC24A1O60721 1099 aa5.79□□□□□ -1.48
LMBR1-212ENST00000448926 CHGAP10645 457 aaKnown RBP5.79□□□□□ -1.48
LMBR1-212ENST00000448926 ZCCHC11Q5TAX3 1644 aaKnown RBP5.79□□□□□ -1.48
LMBR1-212ENST00000448926 CCDC141Q6ZP82 1450 aa5.79□□□□□ -1.48
LMBR1-212ENST00000448926 KIF3BO15066 747 aa5.79□□□□□ -1.48
LMBR1-212ENST00000448926 CYB5RLQ6IPT4 315 aa5.79□□□□□ -1.48
LMBR1-212ENST00000448926 EFCAB2Q5VUJ9 269 aa5.78□□□□□ -1.48
LMBR1-212ENST00000448926 BCORL1Q5H9F3 1711 aa5.78□□□□□ -1.48
LMBR1-212ENST00000448926 SPAG9O60271 1321 aaKnown RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms