RNA–Protein interactions for RNA: ENST00000448874.5

PTMA-208, Transcript of prothymosin alpha, humanhuman

TSL 2

Gene PTMA, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMA-208ENST00000448874 SCAPERQ9BY12 1400 aa27.25■■□□□ 1.95
PTMA-208ENST00000448874 PCF11O94913 1555 aaKnown RBP27.25■■□□□ 1.95
PTMA-208ENST00000448874 YEATS2Q9ULM3 1422 aa27.24■■□□□ 1.95
PTMA-208ENST00000448874 MAGI2Q86UL8 1455 aa27.24■■□□□ 1.95
PTMA-208ENST00000448874 CLIP1P30622 1438 aa27.24■■□□□ 1.95
PTMA-208ENST00000448874 SIGLEC1Q9BZZ2 1709 aa27.21■■□□□ 1.95
PTMA-208ENST00000448874 RIMS1Q86UR5 1692 aaKnown RBP27.21■■□□□ 1.95
PTMA-208ENST00000448874 EFCAB2Q5VUJ9 269 aa27.2■■□□□ 1.94
PTMA-208ENST00000448874 CASKIN1Q8WXD9 1431 aa27.2■■□□□ 1.94
PTMA-208ENST00000448874 ARHGAP5Q13017 1502 aa27.18■■□□□ 1.94
PTMA-208ENST00000448874 CCDC18Q5T9S5 1454 aa27.18■■□□□ 1.94
PTMA-208ENST00000448874 CDC42BPBQ9Y5S2 1711 aa27.12■■□□□ 1.93
PTMA-208ENST00000448874 FYCO1Q9BQS8 1478 aa27.12■■□□□ 1.93
PTMA-208ENST00000448874 ZNF518AQ6AHZ1 1483 aa27.11■■□□□ 1.93
PTMA-208ENST00000448874 PREX2Q70Z35 1606 aa27.1■■□□□ 1.93
PTMA-208ENST00000448874 KDM5CP41229 1560 aa27.09■■□□□ 1.93
PTMA-208ENST00000448874 ATP10AO60312 1499 aa27.08■■□□□ 1.93
PTMA-208ENST00000448874 ILDR1Q86SU0 546 aaPredicted RBP27.08■■□□□ 1.93
PTMA-208ENST00000448874 C9orf84Q5VXU9 1444 aa27.07■■□□□ 1.92
PTMA-208ENST00000448874 FER1L4A9Z1Z3 1794 aa27.07■■□□□ 1.92
PTMA-208ENST00000448874 MLECQ14165 292 aa27.06■■□□□ 1.92
PTMA-208ENST00000448874 LMTK3Q96Q04 1460 aa27.06■■□□□ 1.92
PTMA-208ENST00000448874 AFAP1Q8N556 730 aa27.03■■□□□ 1.92
PTMA-208ENST00000448874 ABCC1P33527 1531 aa27.02■■□□□ 1.92
PTMA-208ENST00000448874 CDC42BPAQ5VT25 1732 aa27.02■■□□□ 1.92
PTMA-208ENST00000448874 PLPPR3Q6T4P5 718 aa27.01■■□□□ 1.91
PTMA-208ENST00000448874 ARHGEF12Q9NZN5 1544 aa27■■□□□ 1.91
PTMA-208ENST00000448874 ITSN2Q9NZM3 1697 aa27■■□□□ 1.91
PTMA-208ENST00000448874 DIP2CQ9Y2E4 1556 aa26.99■■□□□ 1.91
PTMA-208ENST00000448874 MYT1LQ9UL68 1186 aa26.98■■□□□ 1.91
PTMA-208ENST00000448874 ABCA6Q8N139 1617 aa26.96■■□□□ 1.91
PTMA-208ENST00000448874 TRAPPC8Q9Y2L5 1435 aa26.96■■□□□ 1.91
PTMA-208ENST00000448874 MLH3Q9UHC1 1453 aa26.95■■□□□ 1.91
PTMA-208ENST00000448874 REREQ9P2R6 1566 aa26.93■■□□□ 1.9
PTMA-208ENST00000448874 SAMD9LQ8IVG5 1584 aa26.89■■□□□ 1.9
PTMA-208ENST00000448874 GPATCH8Q9UKJ3 1502 aaKnown RBP26.89■■□□□ 1.89
PTMA-208ENST00000448874 KIDINS220Q9ULH0 1771 aa26.87■■□□□ 1.89
PTMA-208ENST00000448874 HSPA2P54652 639 aa26.87■■□□□ 1.89
PTMA-208ENST00000448874 ZNF777Q9ULD5 760 aaPredicted RBP26.86■■□□□ 1.89
PTMA-208ENST00000448874 SYCP2Q9BX26 1530 aa26.85■■□□□ 1.89
PTMA-208ENST00000448874 MTUS2Q5JR59 1369 aa26.84■■□□□ 1.89
PTMA-208ENST00000448874 AGLP35573 1532 aa26.83■■□□□ 1.89
PTMA-208ENST00000448874 CEP162Q5TB80 1403 aa26.82■■□□□ 1.88
PTMA-208ENST00000448874 PREX1Q8TCU6 1659 aa26.82■■□□□ 1.88
PTMA-208ENST00000448874 CEBPAP49715 358 aaPredicted RBP26.81■■□□□ 1.88
PTMA-208ENST00000448874 CCNB3Q8WWL7 1395 aa26.81■■□□□ 1.88
PTMA-208ENST00000448874 CFDP1Q9UEE9 299 aaPredicted RBP26.78■■□□□ 1.88
PTMA-208ENST00000448874 EHBP1L1Q8N3D4 1523 aa26.77■■□□□ 1.88
PTMA-208ENST00000448874 PLEKHH2Q8IVE3 1493 aa26.76■■□□□ 1.87
PTMA-208ENST00000448874 HNRNPMP52272 730 aaKnown RBP eCLIP26.75■■□□□ 1.879e-8■■■■■ 73
PTMA-208ENST00000448874 TIAM1Q13009 1591 aa26.75■■□□□ 1.87
PTMA-208ENST00000448874 KIAA1107Q9UPP5 1409 aa26.74■■□□□ 1.87
PTMA-208ENST00000448874 SPAG9O60271 1321 aaKnown RBP26.74■■□□□ 1.87
PTMA-208ENST00000448874 C3P01024 1663 aa26.74■■□□□ 1.87
PTMA-208ENST00000448874 ATP7AQ04656 1500 aa26.73■■□□□ 1.87
PTMA-208ENST00000448874 INO80Q9ULG1 1556 aaPredicted RBP26.72■■□□□ 1.87
PTMA-208ENST00000448874 FBXO41Q8TF61 875 aa26.71■■□□□ 1.87
PTMA-208ENST00000448874 ESF1Q9H501 851 aaKnown RBP26.7■■□□□ 1.86
PTMA-208ENST00000448874 SETD1BQ9UPS6 1966 aaKnown RBP26.69■■□□□ 1.86
PTMA-208ENST00000448874 UHRF1BP1Q6BDS2 1440 aa26.69■■□□□ 1.86
PTMA-208ENST00000448874 SUPT6HQ7KZ85 1726 aaKnown RBP26.68■■□□□ 1.86
PTMA-208ENST00000448874 CNTLNQ9NXG0 1405 aa26.66■■□□□ 1.86
PTMA-208ENST00000448874 PLXNC1O60486 1568 aa26.65■■□□□ 1.86
PTMA-208ENST00000448874 ZNF644Q9H582 1327 aaPredicted RBP26.64■■□□□ 1.85
PTMA-208ENST00000448874 A2MP01023 1474 aa26.62■■□□□ 1.85
PTMA-208ENST00000448874 MROH2AA6NES4 1674 aa26.62■■□□□ 1.85
PTMA-208ENST00000448874 MBD5Q9P267 1494 aa26.61■■□□□ 1.85
PTMA-208ENST00000448874 STRCQ7RTU9 1775 aa26.61■■□□□ 1.85
PTMA-208ENST00000448874 NCOA2Q15596 1464 aa26.59■■□□□ 1.85
PTMA-208ENST00000448874 ADGBQ8N7X0 1667 aa26.59■■□□□ 1.85
PTMA-208ENST00000448874 CLTCQ00610 1675 aaKnown RBP26.56■■□□□ 1.84
PTMA-208ENST00000448874 LOC105371045A0A1W2PR82 267 aa26.55■■□□□ 1.84
PTMA-208ENST00000448874 VPS8Q8N3P4 1428 aa26.55■■□□□ 1.84
PTMA-208ENST00000448874 ZMYM3Q14202 1370 aa26.53■■□□□ 1.84
PTMA-208ENST00000448874 CAMSAP2Q08AD1 1489 aa26.53■■□□□ 1.84
PTMA-208ENST00000448874 RTEL1-TNFRSF6BF6WH68 1400 aa26.52■■□□□ 1.84
PTMA-208ENST00000448874 NPATQ14207 1427 aa26.52■■□□□ 1.84
PTMA-208ENST00000448874 CCDC141Q6ZP82 1450 aa26.5■■□□□ 1.83
PTMA-208ENST00000448874 GGT6Q6P531 493 aa26.5■■□□□ 1.83
PTMA-208ENST00000448874 CERKQ8TCT0 537 aa26.5■■□□□ 1.83
PTMA-208ENST00000448874 DMRT2Q9Y5R5 561 aa26.5■■□□□ 1.83
PTMA-208ENST00000448874 LRRC9Q6ZRR7 1453 aa26.47■■□□□ 1.83
PTMA-208ENST00000448874 PTPRTO14522 1441 aa26.44■■□□□ 1.82
PTMA-208ENST00000448874 NCOA1Q15788 1441 aa26.44■■□□□ 1.82
PTMA-208ENST00000448874 DHX29Q7Z478 1369 aaKnown RBP26.44■■□□□ 1.82
PTMA-208ENST00000448874 MYO3AQ8NEV4 1616 aa26.43■■□□□ 1.82
PTMA-208ENST00000448874 ARHGEF5Q12774 1597 aa26.42■■□□□ 1.82
PTMA-208ENST00000448874 PTPRKQ15262 1439 aa26.42■■□□□ 1.82
PTMA-208ENST00000448874 CAMSAP1Q5T5Y3 1602 aa26.41■■□□□ 1.82
PTMA-208ENST00000448874 PPP6R1Q9UPN7 881 aa26.41■■□□□ 1.82
PTMA-208ENST00000448874 ZNF142P52746 1687 aaPredicted RBP26.41■■□□□ 1.82
PTMA-208ENST00000448874 RSPH4AQ5TD94 716 aa26.4■■□□□ 1.82
PTMA-208ENST00000448874 MAP3K1Q13233 1512 aa26.39■■□□□ 1.81
PTMA-208ENST00000448874 CEP170BQ9Y4F5 1589 aaPredicted RBP26.37■■□□□ 1.81
PTMA-208ENST00000448874 KIF3BO15066 747 aa26.35■■□□□ 1.81
PTMA-208ENST00000448874 KANK4Q5T7N3 995 aaPredicted RBP26.35■■□□□ 1.81
PTMA-208ENST00000448874 KDM5DQ9BY66 1539 aa26.33■■□□□ 1.81
PTMA-208ENST00000448874 FAM135AQ9P2D6 1515 aa26.31■■□□□ 1.8
PTMA-208ENST00000448874 TSPY4P0CV99 314 aa26.31■■□□□ 1.8
PTMA-208ENST00000448874 TSPY10P0CW01 314 aa26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms