RNA–Protein interactions for RNA: ENST00000448732.1

R3HDM2-208, Transcript of R3H domain containing 2, humanhuman

TSL 1 (best)

Gene R3HDM2, Length 195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-208ENST00000448732 ZFYVE16Q7Z3T8 1539 aa37.97■■■■□ 3.67
R3HDM2-208ENST00000448732 CLIP1P30622 1438 aa37.96■■■■□ 3.67
R3HDM2-208ENST00000448732 POGZQ7Z3K3 1410 aa37.96■■■■□ 3.67
R3HDM2-208ENST00000448732 YEATS2Q9ULM3 1422 aa37.96■■■■□ 3.67
R3HDM2-208ENST00000448732 CASKIN1Q8WXD9 1431 aa37.95■■■■□ 3.67
R3HDM2-208ENST00000448732 MADDQ8WXG6 1647 aa37.94■■■■□ 3.66
R3HDM2-208ENST00000448732 CCDC18Q5T9S5 1454 aa37.87■■■■□ 3.65
R3HDM2-208ENST00000448732 PCF11O94913 1555 aaKnown RBP37.87■■■■□ 3.65
R3HDM2-208ENST00000448732 ARHGAP5Q13017 1502 aa37.84■■■■□ 3.65
R3HDM2-208ENST00000448732 SIGLEC1Q9BZZ2 1709 aa37.84■■■■□ 3.65
R3HDM2-208ENST00000448732 RIMS1Q86UR5 1692 aaKnown RBP37.8■■■■□ 3.64
R3HDM2-208ENST00000448732 ATP10AO60312 1499 aa37.8■■■■□ 3.64
R3HDM2-208ENST00000448732 ILDR1Q86SU0 546 aaPredicted RBP37.8■■■■□ 3.64
R3HDM2-208ENST00000448732 ZNF518AQ6AHZ1 1483 aa37.78■■■■□ 3.64
R3HDM2-208ENST00000448732 FYCO1Q9BQS8 1478 aa37.77■■■■□ 3.64
R3HDM2-208ENST00000448732 AFAP1Q8N556 730 aa37.77■■■■□ 3.64
R3HDM2-208ENST00000448732 CDC42BPBQ9Y5S2 1711 aa37.76■■■■□ 3.64
R3HDM2-208ENST00000448732 C9orf84Q5VXU9 1444 aa37.73■■■■□ 3.63
R3HDM2-208ENST00000448732 MLECQ14165 292 aa37.72■■■■□ 3.63
R3HDM2-208ENST00000448732 KDM5CP41229 1560 aa37.72■■■■□ 3.63
R3HDM2-208ENST00000448732 PREX2Q70Z35 1606 aa37.69■■■■□ 3.62
R3HDM2-208ENST00000448732 LMTK3Q96Q04 1460 aa37.67■■■■□ 3.62
R3HDM2-208ENST00000448732 ARHGEF12Q9NZN5 1544 aa37.62■■■■□ 3.61
R3HDM2-208ENST00000448732 MYT1LQ9UL68 1186 aa37.62■■■■□ 3.61
R3HDM2-208ENST00000448732 FER1L4A9Z1Z3 1794 aa37.62■■■■□ 3.61
R3HDM2-208ENST00000448732 MLH3Q9UHC1 1453 aa37.61■■■■□ 3.61
R3HDM2-208ENST00000448732 PLPPR3Q6T4P5 718 aa37.61■■■■□ 3.61
R3HDM2-208ENST00000448732 CDC42BPAQ5VT25 1732 aa37.6■■■■□ 3.61
R3HDM2-208ENST00000448732 ABCC1P33527 1531 aa37.6■■■■□ 3.61
R3HDM2-208ENST00000448732 TRAPPC8Q9Y2L5 1435 aa37.59■■■■□ 3.61
R3HDM2-208ENST00000448732 DIP2CQ9Y2E4 1556 aa37.55■■■■□ 3.6
R3HDM2-208ENST00000448732 ITSN2Q9NZM3 1697 aa37.53■■■■□ 3.6
R3HDM2-208ENST00000448732 REREQ9P2R6 1566 aa37.53■■■■□ 3.6
R3HDM2-208ENST00000448732 GPATCH8Q9UKJ3 1502 aaKnown RBP37.51■■■■□ 3.59
R3HDM2-208ENST00000448732 ABCA6Q8N139 1617 aa37.49■■■■□ 3.59
R3HDM2-208ENST00000448732 HSPA2P54652 639 aa37.47■■■■□ 3.59
R3HDM2-208ENST00000448732 ZNF777Q9ULD5 760 aaPredicted RBP37.47■■■■□ 3.59
R3HDM2-208ENST00000448732 SAMD9LQ8IVG5 1584 aa37.43■■■■□ 3.58
R3HDM2-208ENST00000448732 AGLP35573 1532 aa37.43■■■■□ 3.58
R3HDM2-208ENST00000448732 CEBPAP49715 358 aaPredicted RBP37.43■■■■□ 3.58
R3HDM2-208ENST00000448732 KIDINS220Q9ULH0 1771 aa37.42■■■■□ 3.58
R3HDM2-208ENST00000448732 MTUS2Q5JR59 1369 aa37.42■■■■□ 3.58
R3HDM2-208ENST00000448732 CFDP1Q9UEE9 299 aaPredicted RBP37.4■■■■□ 3.58
R3HDM2-208ENST00000448732 CCNB3Q8WWL7 1395 aa37.39■■■■□ 3.58
R3HDM2-208ENST00000448732 HNRNPMP52272 730 aaKnown RBP eCLIP37.38■■■■□ 3.574e-7■■■■□ 24.4
R3HDM2-208ENST00000448732 CEP162Q5TB80 1403 aa37.37■■■■□ 3.57
R3HDM2-208ENST00000448732 KIAA1107Q9UPP5 1409 aa37.36■■■■□ 3.57
R3HDM2-208ENST00000448732 SYCP2Q9BX26 1530 aa37.36■■■■□ 3.57
R3HDM2-208ENST00000448732 PLEKHH2Q8IVE3 1493 aa37.33■■■■□ 3.57
R3HDM2-208ENST00000448732 SPAG9O60271 1321 aaKnown RBP37.33■■■■□ 3.57
R3HDM2-208ENST00000448732 FBXO41Q8TF61 875 aa37.31■■■■□ 3.56
R3HDM2-208ENST00000448732 PREX1Q8TCU6 1659 aa37.31■■■■□ 3.56
R3HDM2-208ENST00000448732 SETD1BQ9UPS6 1966 aaKnown RBP37.28■■■■□ 3.56
R3HDM2-208ENST00000448732 ESF1Q9H501 851 aaKnown RBP37.28■■■■□ 3.56
R3HDM2-208ENST00000448732 EHBP1L1Q8N3D4 1523 aa37.25■■■■□ 3.55
R3HDM2-208ENST00000448732 C3P01024 1663 aa37.21■■■■□ 3.55
R3HDM2-208ENST00000448732 TIAM1Q13009 1591 aa37.21■■■■□ 3.55
R3HDM2-208ENST00000448732 ATP7AQ04656 1500 aa37.2■■■■□ 3.55
R3HDM2-208ENST00000448732 CNTLNQ9NXG0 1405 aa37.2■■■■□ 3.55
R3HDM2-208ENST00000448732 UHRF1BP1Q6BDS2 1440 aa37.19■■■■□ 3.54
R3HDM2-208ENST00000448732 ZNF644Q9H582 1327 aaPredicted RBP37.19■■■■□ 3.54
R3HDM2-208ENST00000448732 INO80Q9ULG1 1556 aaPredicted RBP37.17■■■■□ 3.54
R3HDM2-208ENST00000448732 SUPT6HQ7KZ85 1726 aaKnown RBP37.13■■■■□ 3.53
R3HDM2-208ENST00000448732 A2MP01023 1474 aa37.13■■■■□ 3.53
R3HDM2-208ENST00000448732 MBD5Q9P267 1494 aa37.13■■■■□ 3.53
R3HDM2-208ENST00000448732 LOC105371045A0A1W2PR82 267 aa37.12■■■■□ 3.53
R3HDM2-208ENST00000448732 PLXNC1O60486 1568 aa37.1■■■■□ 3.53
R3HDM2-208ENST00000448732 DMRT2Q9Y5R5 561 aa37.08■■■■□ 3.53
R3HDM2-208ENST00000448732 STRCQ7RTU9 1775 aa37.06■■■■□ 3.52
R3HDM2-208ENST00000448732 ZMYM3Q14202 1370 aa37.06■■■■□ 3.52
R3HDM2-208ENST00000448732 MROH2AA6NES4 1674 aa37.05■■■■□ 3.52
R3HDM2-208ENST00000448732 NCOA2Q15596 1464 aa37.05■■■■□ 3.52
R3HDM2-208ENST00000448732 RTEL1-TNFRSF6BF6WH68 1400 aa37.04■■■■□ 3.52
R3HDM2-208ENST00000448732 CERKQ8TCT0 537 aa37.02■■■■□ 3.52
R3HDM2-208ENST00000448732 ADGBQ8N7X0 1667 aa37.01■■■■□ 3.52
R3HDM2-208ENST00000448732 NPATQ14207 1427 aa37.01■■■■□ 3.51
R3HDM2-208ENST00000448732 VPS8Q8N3P4 1428 aa37.01■■■■□ 3.51
R3HDM2-208ENST00000448732 GGT6Q6P531 493 aa36.99■■■■□ 3.51
R3HDM2-208ENST00000448732 PPP6R1Q9UPN7 881 aa36.99■■■■□ 3.51
R3HDM2-208ENST00000448732 RSPH4AQ5TD94 716 aa36.98■■■■□ 3.51
R3HDM2-208ENST00000448732 CLTCQ00610 1675 aaKnown RBP36.94■■■■□ 3.5
R3HDM2-208ENST00000448732 DHX29Q7Z478 1369 aaKnown RBP36.93■■■■□ 3.5
R3HDM2-208ENST00000448732 CAMSAP2Q08AD1 1489 aa36.93■■■■□ 3.5
R3HDM2-208ENST00000448732 CCDC141Q6ZP82 1450 aa36.92■■■■□ 3.5
R3HDM2-208ENST00000448732 LRRC9Q6ZRR7 1453 aa36.91■■■■□ 3.5
R3HDM2-208ENST00000448732 PTPRTO14522 1441 aa36.91■■■■□ 3.5
R3HDM2-208ENST00000448732 PTPRKQ15262 1439 aa36.85■■■■□ 3.49
R3HDM2-208ENST00000448732 MAP3K1Q13233 1512 aa36.85■■■■□ 3.49
R3HDM2-208ENST00000448732 NCOA1Q15788 1441 aa36.85■■■■□ 3.49
R3HDM2-208ENST00000448732 KANK4Q5T7N3 995 aaPredicted RBP36.81■■■■□ 3.48
R3HDM2-208ENST00000448732 ARHGEF5Q12774 1597 aa36.81■■■■□ 3.48
R3HDM2-208ENST00000448732 KIF3BO15066 747 aa36.8■■■■□ 3.48
R3HDM2-208ENST00000448732 TSPY4P0CV99 314 aa36.8■■■■□ 3.48
R3HDM2-208ENST00000448732 TSPY10P0CW01 314 aa36.8■■■■□ 3.48
R3HDM2-208ENST00000448732 CAMSAP1Q5T5Y3 1602 aa36.77■■■■□ 3.48
R3HDM2-208ENST00000448732 MYO3AQ8NEV4 1616 aa36.73■■■■□ 3.47
R3HDM2-208ENST00000448732 ZNF142P52746 1687 aaPredicted RBP36.72■■■■□ 3.47
R3HDM2-208ENST00000448732 CEP170BQ9Y4F5 1589 aaPredicted RBP36.69■■■■□ 3.46
R3HDM2-208ENST00000448732 MIA2Q96PC5 1412 aa36.68■■■■□ 3.46
R3HDM2-208ENST00000448732 NCKAP5LQ9HCH0 1330 aa36.68■■■■□ 3.46
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms