RNA–Protein interactions for RNA: ENST00000448502.5

UBE2F-217, Transcript of ubiquitin conjugating enzyme E2 F (putative), human

TSL 4

Gene UBE2F, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2F-217	ENST00000448502	SCAPER	Q9BY12	1400 aa		33.47	■■■□□ 2.95
UBE2F-217	ENST00000448502	POGZ	Q7Z3K3	1410 aa		33.46	■■■□□ 2.95
UBE2F-217	ENST00000448502	RIMS1	Q86UR5	1692 aa	Known RBP	33.46	■■■□□ 2.95
UBE2F-217	ENST00000448502	MAGI2	Q86UL8	1455 aa		33.45	■■■□□ 2.95
UBE2F-217	ENST00000448502	CDK11A	Q9UQ88	783 aa	Predicted RBP	33.43	■■■□□ 2.94
UBE2F-217	ENST00000448502	TRO	Q12816	1431 aa	Predicted RBP	33.41	■■■□□ 2.94
UBE2F-217	ENST00000448502	EFCAB2	Q5VUJ9	269 aa		33.38	■■■□□ 2.93
UBE2F-217	ENST00000448502	PCF11	O94913	1555 aa	Known RBP	33.38	■■■□□ 2.93
UBE2F-217	ENST00000448502	LMTK3	Q96Q04	1460 aa		33.36	■■■□□ 2.93
UBE2F-217	ENST00000448502	CLIP1	P30622	1438 aa		33.33	■■■□□ 2.93
UBE2F-217	ENST00000448502	ARHGAP5	Q13017	1502 aa		33.31	■■■□□ 2.92
UBE2F-217	ENST00000448502	CASKIN1	Q8WXD9	1431 aa		33.28	■■■□□ 2.92
UBE2F-217	ENST00000448502	ATP10A	O60312	1499 aa		33.28	■■■□□ 2.92
UBE2F-217	ENST00000448502	FER1L4	A9Z1Z3	1794 aa		33.28	■■■□□ 2.92
UBE2F-217	ENST00000448502	MLEC	Q14165	292 aa		33.27	■■■□□ 2.92
UBE2F-217	ENST00000448502	CDC42BPB	Q9Y5S2	1711 aa		33.26	■■■□□ 2.92
UBE2F-217	ENST00000448502	ZNF518A	Q6AHZ1	1483 aa		33.25	■■■□□ 2.91
UBE2F-217	ENST00000448502	C9orf84	Q5VXU9	1444 aa		33.25	■■■□□ 2.91
UBE2F-217	ENST00000448502	KDM5C	P41229	1560 aa		33.25	■■■□□ 2.91
UBE2F-217	ENST00000448502	CCDC18	Q5T9S5	1454 aa		33.24	■■■□□ 2.91
UBE2F-217	ENST00000448502	PLPPR3	Q6T4P5	718 aa		33.23	■■■□□ 2.91
UBE2F-217	ENST00000448502	AFAP1	Q8N556	730 aa		33.21	■■■□□ 2.91
UBE2F-217	ENST00000448502	ARHGEF12	Q9NZN5	1544 aa		33.21	■■■□□ 2.91
UBE2F-217	ENST00000448502	PREX2	Q70Z35	1606 aa		33.2	■■■□□ 2.9
UBE2F-217	ENST00000448502	HSPA2	P54652	639 aa		33.15	■■■□□ 2.9
UBE2F-217	ENST00000448502	FYCO1	Q9BQS8	1478 aa		33.14	■■■□□ 2.9
UBE2F-217	ENST00000448502	DIP2C	Q9Y2E4	1556 aa		33.13	■■■□□ 2.89
UBE2F-217	ENST00000448502	ABCC1	P33527	1531 aa		33.12	■■■□□ 2.89
UBE2F-217	ENST00000448502	CDC42BPA	Q5VT25	1732 aa		33.11	■■■□□ 2.89
UBE2F-217	ENST00000448502	ITSN2	Q9NZM3	1697 aa		33.1	■■■□□ 2.89
UBE2F-217	ENST00000448502	ABCA6	Q8N139	1617 aa		33.1	■■■□□ 2.89
UBE2F-217	ENST00000448502	TRAPPC8	Q9Y2L5	1435 aa		33.09	■■■□□ 2.89
UBE2F-217	ENST00000448502	MLH3	Q9UHC1	1453 aa		33.08	■■■□□ 2.89
UBE2F-217	ENST00000448502	RERE	Q9P2R6	1566 aa		33.08	■■■□□ 2.89
UBE2F-217	ENST00000448502	FBXO41	Q8TF61	875 aa		33.07	■■■□□ 2.88
UBE2F-217	ENST00000448502	MYT1L	Q9UL68	1186 aa		33.06	■■■□□ 2.88
UBE2F-217	ENST00000448502	CEBPA	P49715	358 aa	Predicted RBP	33.02	■■■□□ 2.88
UBE2F-217	ENST00000448502	PREX1	Q8TCU6	1659 aa		33.01	■■■□□ 2.87
UBE2F-217	ENST00000448502	KIDINS220	Q9ULH0	1771 aa		32.99	■■■□□ 2.87
UBE2F-217	ENST00000448502	AGL	P35573	1532 aa		32.96	■■■□□ 2.87
UBE2F-217	ENST00000448502	SAMD9L	Q8IVG5	1584 aa		32.96	■■■□□ 2.87
UBE2F-217	ENST00000448502	GPATCH8	Q9UKJ3	1502 aa	Known RBP	32.95	■■■□□ 2.87
UBE2F-217	ENST00000448502	SYCP2	Q9BX26	1530 aa		32.91	■■■□□ 2.86
UBE2F-217	ENST00000448502	ZNF777	Q9ULD5	760 aa	Predicted RBP	32.9	■■■□□ 2.86
UBE2F-217	ENST00000448502	SETD1B	Q9UPS6	1966 aa	Known RBP	32.9	■■■□□ 2.86
UBE2F-217	ENST00000448502	C3	P01024	1663 aa		32.88	■■■□□ 2.85
UBE2F-217	ENST00000448502	UHRF1BP1	Q6BDS2	1440 aa		32.83	■■■□□ 2.85
UBE2F-217	ENST00000448502	HNRNPM	P52272	730 aa	Known RBP eCLIP	32.82	■■■□□ 2.84	2e-6	■■■□□ 16.1
UBE2F-217	ENST00000448502	STRC	Q7RTU9	1775 aa		32.81	■■■□□ 2.84
UBE2F-217	ENST00000448502	MTUS2	Q5JR59	1369 aa		32.8	■■■□□ 2.84
UBE2F-217	ENST00000448502	CCNB3	Q8WWL7	1395 aa		32.8	■■■□□ 2.84
UBE2F-217	ENST00000448502	KIAA1107	Q9UPP5	1409 aa		32.79	■■■□□ 2.84
UBE2F-217	ENST00000448502	CFDP1	Q9UEE9	299 aa	Predicted RBP	32.79	■■■□□ 2.84
UBE2F-217	ENST00000448502	SPAG9	O60271	1321 aa	Known RBP	32.78	■■■□□ 2.84
UBE2F-217	ENST00000448502	ESF1	Q9H501	851 aa	Known RBP	32.77	■■■□□ 2.84
UBE2F-217	ENST00000448502	PLEKHH2	Q8IVE3	1493 aa		32.77	■■■□□ 2.84
UBE2F-217	ENST00000448502	ATP7A	Q04656	1500 aa		32.77	■■■□□ 2.84
UBE2F-217	ENST00000448502	INO80	Q9ULG1	1556 aa	Predicted RBP	32.76	■■■□□ 2.84
UBE2F-217	ENST00000448502	CNTLN	Q9NXG0	1405 aa		32.75	■■■□□ 2.83
UBE2F-217	ENST00000448502	SUPT6H	Q7KZ85	1726 aa	Known RBP	32.74	■■■□□ 2.83
UBE2F-217	ENST00000448502	CERK	Q8TCT0	537 aa		32.74	■■■□□ 2.83
UBE2F-217	ENST00000448502	TIAM1	Q13009	1591 aa		32.73	■■■□□ 2.83
UBE2F-217	ENST00000448502	CEP162	Q5TB80	1403 aa		32.71	■■■□□ 2.83
UBE2F-217	ENST00000448502	EHBP1L1	Q8N3D4	1523 aa		32.71	■■■□□ 2.83
UBE2F-217	ENST00000448502	PLXNC1	O60486	1568 aa		32.7	■■■□□ 2.83
UBE2F-217	ENST00000448502	MROH2A	A6NES4	1674 aa		32.69	■■■□□ 2.82
UBE2F-217	ENST00000448502	ZNF644	Q9H582	1327 aa	Predicted RBP	32.66	■■■□□ 2.82
UBE2F-217	ENST00000448502	A2M	P01023	1474 aa		32.66	■■■□□ 2.82
UBE2F-217	ENST00000448502	DMRT2	Q9Y5R5	561 aa		32.65	■■■□□ 2.82
UBE2F-217	ENST00000448502	MBD5	Q9P267	1494 aa		32.61	■■■□□ 2.81
UBE2F-217	ENST00000448502	ZMYM3	Q14202	1370 aa		32.61	■■■□□ 2.81
UBE2F-217	ENST00000448502	CLTC	Q00610	1675 aa	Known RBP	32.61	■■■□□ 2.81
UBE2F-217	ENST00000448502	NPAT	Q14207	1427 aa		32.6	■■■□□ 2.81
UBE2F-217	ENST00000448502	ADGB	Q8N7X0	1667 aa		32.59	■■■□□ 2.81
UBE2F-217	ENST00000448502	PTPRT	O14522	1441 aa		32.58	■■■□□ 2.81
UBE2F-217	ENST00000448502	NCOA1	Q15788	1441 aa		32.55	■■■□□ 2.8
UBE2F-217	ENST00000448502	GGT6	Q6P531	493 aa		32.52	■■■□□ 2.8
UBE2F-217	ENST00000448502	NCOA2	Q15596	1464 aa		32.52	■■■□□ 2.8
UBE2F-217	ENST00000448502	RTEL1-TNFRSF6B	F6WH68	1400 aa		32.51	■■■□□ 2.79
UBE2F-217	ENST00000448502	CAMSAP1	Q5T5Y3	1602 aa		32.49	■■■□□ 2.79
UBE2F-217	ENST00000448502	PTPRK	Q15262	1439 aa		32.48	■■■□□ 2.79
UBE2F-217	ENST00000448502	MYO3A	Q8NEV4	1616 aa		32.47	■■■□□ 2.79
UBE2F-217	ENST00000448502	CAMSAP2	Q08AD1	1489 aa		32.46	■■■□□ 2.79
UBE2F-217	ENST00000448502	ZNF142	P52746	1687 aa	Predicted RBP	32.46	■■■□□ 2.79
UBE2F-217	ENST00000448502	CCDC141	Q6ZP82	1450 aa		32.44	■■■□□ 2.78
UBE2F-217	ENST00000448502	PPP6R1	Q9UPN7	881 aa		32.43	■■■□□ 2.78
UBE2F-217	ENST00000448502	LTBP4	Q8N2S1	1624 aa		32.43	■■■□□ 2.78
UBE2F-217	ENST00000448502	DHX29	Q7Z478	1369 aa	Known RBP	32.43	■■■□□ 2.78
UBE2F-217	ENST00000448502	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	32.4	■■■□□ 2.78
UBE2F-217	ENST00000448502	VPS8	Q8N3P4	1428 aa		32.37	■■■□□ 2.77
UBE2F-217	ENST00000448502	LOC105371045	A0A1W2PR82	267 aa		32.37	■■■□□ 2.77
UBE2F-217	ENST00000448502	NCKAP5L	Q9HCH0	1330 aa		32.36	■■■□□ 2.77
UBE2F-217	ENST00000448502	ARHGEF5	Q12774	1597 aa		32.34	■■■□□ 2.77
UBE2F-217	ENST00000448502	PLA2R1	Q13018	1463 aa		32.34	■■■□□ 2.77
UBE2F-217	ENST00000448502	LRRC9	Q6ZRR7	1453 aa		32.34	■■■□□ 2.77
UBE2F-217	ENST00000448502	RSPH4A	Q5TD94	716 aa		32.33	■■■□□ 2.77
UBE2F-217	ENST00000448502	KIF3B	O15066	747 aa		32.32	■■■□□ 2.76
UBE2F-217	ENST00000448502	TCOF1	Q13428	1488 aa	Known RBP	32.3	■■■□□ 2.76
UBE2F-217	ENST00000448502	KDM5D	Q9BY66	1539 aa		32.27	■■■□□ 2.76
UBE2F-217	ENST00000448502	A2ML1	A8K2U0	1454 aa		32.27	■■■□□ 2.76

Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms