RNA–Protein interactions for RNA: ENST00000448502.5

UBE2F-217, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 4

Gene UBE2F, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-217ENST00000448502 NISCHQ9Y2I1 1504 aa51.08■■■■■ 5.77
UBE2F-217ENST00000448502 ABCC9O60706 1549 aa45.85■■■■■ 4.93
UBE2F-217ENST00000448502 CCDC180Q9P1Z9 1646 aa45.85■■■■■ 4.93
UBE2F-217ENST00000448502 RB1CC1Q8TDY2 1594 aa43.62■■■■■ 4.57
UBE2F-217ENST00000448502 NACADO15069 1562 aa43.33■■■■■ 4.53
UBE2F-217ENST00000448502 DNAJC5BQ9UF47 199 aa43.05■■■■■ 4.48
UBE2F-217ENST00000448502 DCAF8L2P0C7V8 631 aa43.04■■■■■ 4.48
UBE2F-217ENST00000448502 MYO15BQ96JP2 1530 aa42.72■■■■■ 4.43
UBE2F-217ENST00000448502 UNC13AQ9UPW8 1703 aa42.72■■■■■ 4.43
UBE2F-217ENST00000448502 PABPN1Q86U42 306 aaKnown RBP eCLIP42.67■■■■■ 4.42
UBE2F-217ENST00000448502 BICRAQ9NZM4 1560 aa42.42■■■■■ 4.38
UBE2F-217ENST00000448502 ZCCHC6Q5VYS8 1495 aaKnown RBP42.34■■■■■ 4.37
UBE2F-217ENST00000448502 DCAF1Q9Y4B6 1507 aa42.18■■■■■ 4.34
UBE2F-217ENST00000448502 SCRIBQ14160 1630 aa41.78■■■■■ 4.28
UBE2F-217ENST00000448502 SHROOM4Q9ULL8 1493 aa41.78■■■■■ 4.28
UBE2F-217ENST00000448502 CC2D2AQ9P2K1 1620 aa41.44■■■■■ 4.22
UBE2F-217ENST00000448502 EIF4G1Q04637 1599 aaKnown RBP41.34■■■■■ 4.21
UBE2F-217ENST00000448502 CECR2Q9BXF3 1484 aa41.29■■■■■ 4.2
UBE2F-217ENST00000448502 NCAPD3P42695 1498 aa40■■■■□ 3.99
UBE2F-217ENST00000448502 ATAD2BQ9ULI0 1458 aa39.89■■■■□ 3.98
UBE2F-217ENST00000448502 SMARCA4P51532 1647 aa39.86■■■■□ 3.97
UBE2F-217ENST00000448502 SMARCA2P51531 1590 aa39.76■■■■□ 3.95
UBE2F-217ENST00000448502 HMGXB3Q12766 1538 aa39.71■■■■□ 3.95
UBE2F-217ENST00000448502 BAZ1AQ9NRL2 1556 aaPredicted RBP39.63■■■■□ 3.93
UBE2F-217ENST00000448502 ERCC6Q03468 1493 aa39.56■■■■□ 3.92
UBE2F-217ENST00000448502 CUX2O14529 1486 aa39.5■■■■□ 3.91
UBE2F-217ENST00000448502 DNAJC5Q9H3Z4 198 aa39.49■■■■□ 3.91
UBE2F-217ENST00000448502 BAZ1BQ9UIG0 1483 aaKnown RBP39.48■■■■□ 3.91
UBE2F-217ENST00000448502 PEG3Q9GZU2 1588 aa39.47■■■■□ 3.91
UBE2F-217ENST00000448502 NESP48681 1621 aa39.41■■■■□ 3.9
UBE2F-217ENST00000448502 MROH2BQ7Z745 1585 aa39.38■■■■□ 3.89
UBE2F-217ENST00000448502 LAMC3Q9Y6N6 1575 aa39.1■■■■□ 3.85
UBE2F-217ENST00000448502 THOC2Q8NI27 1593 aaKnown RBP39.02■■■■□ 3.84
UBE2F-217ENST00000448502 KIF21AQ7Z4S6 1674 aa38.92■■■■□ 3.82
UBE2F-217ENST00000448502 WIZO95785 1651 aa38.9■■■■□ 3.82
UBE2F-217ENST00000448502 PDS5BQ9NTI5 1447 aa38.84■■■■□ 3.81
UBE2F-217ENST00000448502 CADPSQ9ULU8 1353 aa38.77■■■■□ 3.8
UBE2F-217ENST00000448502 RSF1Q96T23 1441 aaPredicted RBP38.54■■■■□ 3.76
UBE2F-217ENST00000448502 MRC2Q9UBG0 1479 aa38.54■■■■□ 3.76
UBE2F-217ENST00000448502 WDR62O43379 1518 aa38.47■■■■□ 3.75
UBE2F-217ENST00000448502 TOP2AP11388 1531 aaKnown RBP38.39■■■■□ 3.74
UBE2F-217ENST00000448502 CEP164Q9UPV0 1460 aa38.38■■■■□ 3.73
UBE2F-217ENST00000448502 CFTRP13569 1480 aa38.35■■■■□ 3.73
UBE2F-217ENST00000448502 FANCD2Q9BXW9 1451 aa38.35■■■■□ 3.73
UBE2F-217ENST00000448502 URB2Q14146 1524 aaKnown RBP38.07■■■■□ 3.68
UBE2F-217ENST00000448502 PRDM2Q13029 1718 aa38■■■■□ 3.67
UBE2F-217ENST00000448502 CCDC88BA6NC98 1476 aa37.96■■■■□ 3.67
UBE2F-217ENST00000448502 TRIM41Q8WV44 630 aa37.74■■■■□ 3.63
UBE2F-217ENST00000448502 OSCARQ8IYS5 282 aa37.66■■■■□ 3.62
UBE2F-217ENST00000448502 TOPBP1Q92547 1522 aa37.63■■■■□ 3.61
UBE2F-217ENST00000448502 IFT140Q96RY7 1462 aa37.61■■■■□ 3.61
UBE2F-217ENST00000448502 ZNF608Q9ULD9 1512 aaPredicted RBP37.59■■■■□ 3.61
UBE2F-217ENST00000448502 ABCC8Q09428 1581 aa37.5■■■■□ 3.59
UBE2F-217ENST00000448502 DNMBPQ6XZF7 1577 aa37.49■■■■□ 3.59
UBE2F-217ENST00000448502 EIF4G3O43432 1585 aaKnown RBP37.38■■■■□ 3.58
UBE2F-217ENST00000448502 TARBP1Q13395 1621 aaKnown RBP37.32■■■■□ 3.57
UBE2F-217ENST00000448502 POLA1P09884 1462 aaPredicted RBP37.25■■■■□ 3.55
UBE2F-217ENST00000448502 RIMBP3CA6NJZ7 1639 aa37.25■■■■□ 3.55
UBE2F-217ENST00000448502 RIMBP3BA6NNM3 1639 aa37.25■■■■□ 3.55
UBE2F-217ENST00000448502 RIMBP3Q9UFD9 1639 aa37.25■■■■□ 3.55
UBE2F-217ENST00000448502 AQRO60306 1485 aaKnown RBP eCLIP37.23■■■■□ 3.55
UBE2F-217ENST00000448502 ARHGEF11O15085 1522 aa37.12■■■■□ 3.53
UBE2F-217ENST00000448502 CHD1O14646 1710 aa37.12■■■■□ 3.53
UBE2F-217ENST00000448502 RAD54L2Q9Y4B4 1467 aa37.12■■■■□ 3.53
UBE2F-217ENST00000448502 SOGA1O94964 1423 aa37.04■■■■□ 3.52
UBE2F-217ENST00000448502 FGD5Q6ZNL6 1462 aa37.01■■■■□ 3.51
UBE2F-217ENST00000448502 CUX1P39880 1505 aa37■■■■□ 3.51
UBE2F-217ENST00000448502 TDRD9Q8NDG6 1382 aaKnown RBP36.99■■■■□ 3.51
UBE2F-217ENST00000448502 FBLN2P98095 1184 aa36.94■■■■□ 3.5
UBE2F-217ENST00000448502 WDR97A6NE52 1622 aa36.9■■■■□ 3.5
UBE2F-217ENST00000448502 SNAPC4Q5SXM2 1469 aa36.85■■■■□ 3.49
UBE2F-217ENST00000448502 CYB5RLQ6IPT4 315 aa36.8■■■■□ 3.48
UBE2F-217ENST00000448502 SUPT5HO00267 1087 aaKnown RBP36.78■■■■□ 3.48
UBE2F-217ENST00000448502 ARAP1Q96P48 1450 aa36.76■■■■□ 3.48
UBE2F-217ENST00000448502 MAGI1Q96QZ7 1491 aaPredicted RBP36.74■■■■□ 3.47
UBE2F-217ENST00000448502 GRIN2BQ13224 1484 aa36.73■■■■□ 3.47
UBE2F-217ENST00000448502 CLASP1Q7Z460 1538 aa36.69■■■■□ 3.46
UBE2F-217ENST00000448502 CHMP7Q8WUX9 453 aaPredicted RBP36.66■■■■□ 3.46
UBE2F-217ENST00000448502 PBRM1Q86U86 1689 aa36.63■■■■□ 3.45
UBE2F-217ENST00000448502 SYNJ1O43426 1573 aa36.62■■■■□ 3.45
UBE2F-217ENST00000448502 SYNJ2O15056 1496 aa36.62■■■■□ 3.45
UBE2F-217ENST00000448502 GAPVD1Q14C86 1478 aa36.61■■■■□ 3.45
UBE2F-217ENST00000448502 ABCA10Q8WWZ4 1543 aa36.59■■■■□ 3.45
UBE2F-217ENST00000448502 ABCA5Q8WWZ7 1642 aa36.56■■■■□ 3.44
UBE2F-217ENST00000448502 BIVM-ERCC5R4GMW8 1640 aa36.4■■■■□ 3.42
UBE2F-217ENST00000448502 WRNQ14191 1432 aaPredicted RBP eCLIP36.4■■■■□ 3.42
UBE2F-217ENST00000448502 TOP2BQ02880 1626 aa36.38■■■■□ 3.41
UBE2F-217ENST00000448502 TRHP20396 242 aaPredicted RBP36.37■■■■□ 3.41
UBE2F-217ENST00000448502 GRIN2AQ12879 1464 aa36.28■■■■□ 3.4
UBE2F-217ENST00000448502 ADAMTS12P58397 1594 aa36.27■■■■□ 3.4
UBE2F-217ENST00000448502 CEP170Q5SW79 1584 aa36.17■■■■□ 3.38
UBE2F-217ENST00000448502 NUP160Q12769 1436 aa36.17■■■■□ 3.38
UBE2F-217ENST00000448502 FHAD1B1AJZ9 1412 aa36.14■■■■□ 3.38
UBE2F-217ENST00000448502 ERCC6L2Q5T890 1561 aa36.14■■■■□ 3.38
UBE2F-217ENST00000448502 ERICH3Q5RHP9 1530 aa36.12■■■■□ 3.37
UBE2F-217ENST00000448502 SHROOM2Q13796 1616 aa36.02■■■■□ 3.36
UBE2F-217ENST00000448502 PRG4Q92954 1404 aaPredicted RBP35.8■■■■□ 3.32
UBE2F-217ENST00000448502 RUSC2Q8N2Y8 1516 aa35.77■■■■□ 3.32
UBE2F-217ENST00000448502 JPH4Q96JJ6 628 aa35.75■■■■□ 3.31
UBE2F-217ENST00000448502 IGF1RP08069 1367 aa35.65■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms