RNA–Protein interactions for RNA: ENST00000448325.1

RAB28P3-201, Transcript of RAB28, member RAS oncogene family pseudogene 3, humanhuman

BASIC

Gene RAB28P3, Length 597 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P3-201ENST00000448325 PSEN1P49768 467 aa10.33□□□□□ -0.76
RAB28P3-201ENST00000448325 ASTLQ6HA08 431 aaPredicted RBP10.32□□□□□ -0.76
RAB28P3-201ENST00000448325 BARGINQ6ZT62 677 aa10.31□□□□□ -0.76
RAB28P3-201ENST00000448325 GPBP1L1Q9HC44 474 aaPredicted RBP10.3□□□□□ -0.76
RAB28P3-201ENST00000448325 SPNS2Q8IVW8 549 aa10.29□□□□□ -0.76
RAB28P3-201ENST00000448325 FBXO22Q8NEZ5 403 aa10.29□□□□□ -0.76
RAB28P3-201ENST00000448325 ATMINO43313 823 aaPredicted RBP10.28□□□□□ -0.76
RAB28P3-201ENST00000448325 SMYD5Q6GMV2 418 aa10.28□□□□□ -0.76
RAB28P3-201ENST00000448325 NCKAP5LQ9HCH0 1330 aa10.28□□□□□ -0.76
RAB28P3-201ENST00000448325 EFCAB3Q8N7B9 438 aa10.27□□□□□ -0.77
RAB28P3-201ENST00000448325 NLRP6P59044 892 aa10.26□□□□□ -0.77
RAB28P3-201ENST00000448325 IL27Q8NEV9 243 aa10.26□□□□□ -0.77
RAB28P3-201ENST00000448325 LARP6Q9BRS8 491 aaKnown RBP10.26□□□□□ -0.77
RAB28P3-201ENST00000448325 ZMYND15Q9H091 742 aa10.26□□□□□ -0.77
RAB28P3-201ENST00000448325 PHF8Q9UPP1 1060 aa10.26□□□□□ -0.77
RAB28P3-201ENST00000448325 AK7Q96M32 723 aa10.24□□□□□ -0.77
RAB28P3-201ENST00000448325 CABP2Q9NPB3 220 aa10.22□□□□□ -0.77
RAB28P3-201ENST00000448325 RBM26Q5T8P6 1007 aaKnown RBP10.21□□□□□ -0.77
RAB28P3-201ENST00000448325 SOX12O15370 315 aa10.2□□□□□ -0.78
RAB28P3-201ENST00000448325 MFSD10Q14728 455 aa10.2□□□□□ -0.78
RAB28P3-201ENST00000448325 KRI1Q8N9T8 703 aaKnown RBP10.2□□□□□ -0.78
RAB28P3-201ENST00000448325 RSPH6AQ9H0K4 717 aa10.2□□□□□ -0.78
RAB28P3-201ENST00000448325 CCDC61Q9Y6R9 512 aa10.2□□□□□ -0.78
RAB28P3-201ENST00000448325 PDE4AP27815 886 aa10.19□□□□□ -0.78
RAB28P3-201ENST00000448325 TRIM26Q12899 539 aaPredicted RBP10.19□□□□□ -0.78
RAB28P3-201ENST00000448325 KDM4CQ9H3R0 1056 aa10.19□□□□□ -0.78
RAB28P3-201ENST00000448325 MS4A3Q96HJ5 214 aa10.18□□□□□ -0.78
RAB28P3-201ENST00000448325 ARIH1Q9Y4X5 557 aaPredicted RBP10.18□□□□□ -0.78
RAB28P3-201ENST00000448325 MLLT3P42568 568 aaPredicted RBP10.17□□□□□ -0.78
RAB28P3-201ENST00000448325 IFNL1Q8IU54 200 aa10.17□□□□□ -0.78
RAB28P3-201ENST00000448325 GPIHBP1Q8IV16 184 aa10.17□□□□□ -0.78
RAB28P3-201ENST00000448325 DDX27Q96GQ7 796 aaKnown RBP10.15□□□□□ -0.78
RAB28P3-201ENST00000448325 ARID3AQ99856 593 aa10.15□□□□□ -0.78
RAB28P3-201ENST00000448325 CRISPLD2Q9H0B8 497 aa10.15□□□□□ -0.78
RAB28P3-201ENST00000448325 TRIM66O15016 1216 aa10.14□□□□□ -0.79
RAB28P3-201ENST00000448325 CAMK2BQ13554 666 aa10.14□□□□□ -0.79
RAB28P3-201ENST00000448325 ST18O60284 1047 aa10.13□□□□□ -0.79
RAB28P3-201ENST00000448325 PDE4DQ08499 809 aa10.13□□□□□ -0.79
RAB28P3-201ENST00000448325 MS4A4AQ96JQ5 239 aa10.13□□□□□ -0.79
RAB28P3-201ENST00000448325 HRCP23327 699 aa10.11□□□□□ -0.79
RAB28P3-201ENST00000448325 RANGAP1P46060 587 aaPredicted RBP10.11□□□□□ -0.79
RAB28P3-201ENST00000448325 ATN1P54259 1190 aaPredicted RBP10.11□□□□□ -0.79
RAB28P3-201ENST00000448325 C1orf115Q9H7X2 142 aa10.11□□□□□ -0.79
RAB28P3-201ENST00000448325 MAP3K13O43283 966 aa10.09□□□□□ -0.79
RAB28P3-201ENST00000448325 MKRN3Q13064 507 aaKnown RBP10.09□□□□□ -0.79
RAB28P3-201ENST00000448325 FAM117AQ9C073 453 aa10.07□□□□□ -0.8
RAB28P3-201ENST00000448325 ARID3CA6NKF2 412 aa10.05□□□□□ -0.8
RAB28P3-201ENST00000448325 KIF12Q96FN5 646 aa10.05□□□□□ -0.8
RAB28P3-201ENST00000448325 POTEFA5A3E0 1075 aa10.04□□□□□ -0.8
RAB28P3-201ENST00000448325 SEC24BO95487 1268 aa10.04□□□□□ -0.8
RAB28P3-201ENST00000448325 ZNF316A6NFI3 1004 aaPredicted RBP10.03□□□□□ -0.8
RAB28P3-201ENST00000448325 SLAIN1Q8ND83 568 aa10.02□□□□□ -0.81
RAB28P3-201ENST00000448325 PLEKHG3A1L390 1219 aa10□□□□□ -0.81
RAB28P3-201ENST00000448325 DPYSL4O14531 572 aa10□□□□□ -0.81
RAB28P3-201ENST00000448325 GPR37O15354 613 aa9.99□□□□□ -0.81
RAB28P3-201ENST00000448325 PPP1R15BQ5SWA1 713 aa9.99□□□□□ -0.81
RAB28P3-201ENST00000448325 TMEM121BQ9BXQ6 578 aaPredicted RBP9.99□□□□□ -0.81
RAB28P3-201ENST00000448325 APBB1O00213 710 aa9.98□□□□□ -0.81
RAB28P3-201ENST00000448325 EMILIN3Q9NT22 766 aa9.98□□□□□ -0.81
RAB28P3-201ENST00000448325 NPM2Q86SE8 214 aaKnown RBP9.97□□□□□ -0.81
RAB28P3-201ENST00000448325 BMP2KQ9NSY1 1161 aaPredicted RBP9.94□□□□□ -0.82
RAB28P3-201ENST00000448325 SPDYE16A6NNV3 312 aaPredicted RBP9.93□□□□□ -0.82
RAB28P3-201ENST00000448325 DDRGK1Q96HY6 314 aa9.93□□□□□ -0.82
RAB28P3-201ENST00000448325 GPHNQ9NQX3 736 aaPredicted RBP9.93□□□□□ -0.82
RAB28P3-201ENST00000448325 MINK1Q8N4C8 1332 aaPredicted RBP9.92□□□□□ -0.82
RAB28P3-201ENST00000448325 GOLGA2Q08379 1002 aa9.92□□□□□ -0.82
RAB28P3-201ENST00000448325 PDIA6Q15084 440 aa9.92□□□□□ -0.82
RAB28P3-201ENST00000448325 CCDC102AQ96A19 550 aa9.92□□□□□ -0.82
RAB28P3-201ENST00000448325 COLQQ9Y215 455 aaPredicted RBP9.92□□□□□ -0.82
RAB28P3-201ENST00000448325 FLIIQ13045 1269 aa9.91□□□□□ -0.82
RAB28P3-201ENST00000448325 PARP9Q8IXQ6 854 aa9.91□□□□□ -0.82
RAB28P3-201ENST00000448325 TMEM106CQ9BVX2 250 aa9.89□□□□□ -0.83
RAB28P3-201ENST00000448325 NUTM2FA1L443 756 aa9.88□□□□□ -0.83
RAB28P3-201ENST00000448325 IRF6O14896 467 aa9.88□□□□□ -0.83
RAB28P3-201ENST00000448325 MAP2K5Q13163 448 aa9.88□□□□□ -0.83
RAB28P3-201ENST00000448325 DSG2Q14126 1118 aa9.88□□□□□ -0.83
RAB28P3-201ENST00000448325 AMHR2Q16671 573 aa9.88□□□□□ -0.83
RAB28P3-201ENST00000448325 MARVELD3Q96A59 401 aa9.88□□□□□ -0.83
RAB28P3-201ENST00000448325 SNPHO15079 494 aa9.87□□□□□ -0.83
RAB28P3-201ENST00000448325 ONECUT3O60422 494 aaPredicted RBP9.87□□□□□ -0.83
RAB28P3-201ENST00000448325 GRXCR2A6NFK2 248 aa9.86□□□□□ -0.83
RAB28P3-201ENST00000448325 PDIA4P13667 645 aaKnown RBP9.86□□□□□ -0.83
RAB28P3-201ENST00000448325 TIE1P35590 1138 aa9.86□□□□□ -0.83
RAB28P3-201ENST00000448325 CLUAP1Q96AJ1 413 aa9.86□□□□□ -0.83
RAB28P3-201ENST00000448325 TRPC6Q9Y210 931 aa9.85□□□□□ -0.83
RAB28P3-201ENST00000448325 FECHP22830 423 aa9.84□□□□□ -0.83
RAB28P3-201ENST00000448325 CCDC82Q8N4S0 544 aa9.84□□□□□ -0.83
RAB28P3-201ENST00000448325 TRAK2O60296 914 aa9.83□□□□□ -0.84
RAB28P3-201ENST00000448325 A6NJR5 290 aa9.82□□□□□ -0.84
RAB28P3-201ENST00000448325 GNPATO15228 680 aa9.82□□□□□ -0.84
RAB28P3-201ENST00000448325 NECTIN2Q92692 538 aa9.82□□□□□ -0.84
RAB28P3-201ENST00000448325 ZBTB7CA1YPR0 619 aa9.81□□□□□ -0.84
RAB28P3-201ENST00000448325 IER5LQ5T953 404 aa9.81□□□□□ -0.84
RAB28P3-201ENST00000448325 TTLL12Q14166 644 aaPredicted RBP9.8□□□□□ -0.84
RAB28P3-201ENST00000448325 GOPCQ9HD26 462 aa9.79□□□□□ -0.84
RAB28P3-201ENST00000448325 OSBPP22059 807 aa9.78□□□□□ -0.84
RAB28P3-201ENST00000448325 DPY19L2Q6NUT2 758 aa9.78□□□□□ -0.84
RAB28P3-201ENST00000448325 PCMTD1Q96MG8 357 aaPredicted RBP9.78□□□□□ -0.84
RAB28P3-201ENST00000448325 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.78□□□□□ -0.84
RAB28P3-201ENST00000448325 MS4A1P11836 297 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms