RNA–Protein interactions for RNA: ENST00000448190.6

SNHG4-201, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-201ENST00000448190 AFAP1Q8N556 730 aa20.91■□□□□ 0.94
SNHG4-201ENST00000448190 TIAM1Q13009 1591 aa20.9■□□□□ 0.94
SNHG4-201ENST00000448190 GPATCH8Q9UKJ3 1502 aaKnown RBP20.9■□□□□ 0.94
SNHG4-201ENST00000448190 LRRC9Q6ZRR7 1453 aa20.9■□□□□ 0.94
SNHG4-201ENST00000448190 ZNF644Q9H582 1327 aaPredicted RBP20.9■□□□□ 0.94
SNHG4-201ENST00000448190 HNRNPMP52272 730 aaKnown RBP eCLIP20.9■□□□□ 0.94
SNHG4-201ENST00000448190 DENND4BO75064 1496 aaPredicted RBP20.89■□□□□ 0.94
SNHG4-201ENST00000448190 ADGRL1O94910 1474 aa20.88■□□□□ 0.93
SNHG4-201ENST00000448190 MYT1LQ9UL68 1186 aa20.87■□□□□ 0.93
SNHG4-201ENST00000448190 EHBP1L1Q8N3D4 1523 aa20.86■□□□□ 0.93
SNHG4-201ENST00000448190 NCOA2Q15596 1464 aa20.86■□□□□ 0.93
SNHG4-201ENST00000448190 MAP3K1Q13233 1512 aa20.83■□□□□ 0.92
SNHG4-201ENST00000448190 MYO5CQ9NQX4 1742 aa20.81■□□□□ 0.92
SNHG4-201ENST00000448190 ARHGEF12Q9NZN5 1544 aa20.8■□□□□ 0.92
SNHG4-201ENST00000448190 TRAPPC8Q9Y2L5 1435 aa20.79■□□□□ 0.92
SNHG4-201ENST00000448190 POGZQ7Z3K3 1410 aa20.78■□□□□ 0.92
SNHG4-201ENST00000448190 ARID4BQ4LE39 1312 aaPredicted RBP20.78■□□□□ 0.92
SNHG4-201ENST00000448190 CFAP74Q9C0B2 1584 aa20.77■□□□□ 0.92
SNHG4-201ENST00000448190 KDM4FA0A1W2PPD8 638 aa20.77■□□□□ 0.92
SNHG4-201ENST00000448190 CDC42BPBQ9Y5S2 1711 aa20.77■□□□□ 0.92
SNHG4-201ENST00000448190 PREX2Q70Z35 1606 aa20.75■□□□□ 0.91
SNHG4-201ENST00000448190 YEATS2Q9ULM3 1422 aa20.75■□□□□ 0.91
SNHG4-201ENST00000448190 FRMPD1Q5SYB0 1578 aa20.75■□□□□ 0.91
SNHG4-201ENST00000448190 CDC42BPAQ5VT25 1732 aa20.74■□□□□ 0.91
SNHG4-201ENST00000448190 SUPT6HQ7KZ85 1726 aaKnown RBP20.73■□□□□ 0.91
SNHG4-201ENST00000448190 SPAG9O60271 1321 aaKnown RBP20.72■□□□□ 0.91
SNHG4-201ENST00000448190 AEBP2Q6ZN18 517 aaPredicted RBP20.71■□□□□ 0.91
SNHG4-201ENST00000448190 SAMD9LQ8IVG5 1584 aa20.71■□□□□ 0.91
SNHG4-201ENST00000448190 KIAA1107Q9UPP5 1409 aa20.7■□□□□ 0.9
SNHG4-201ENST00000448190 ZNF518AQ6AHZ1 1483 aa20.7■□□□□ 0.9
SNHG4-201ENST00000448190 ABCC1P33527 1531 aa20.69■□□□□ 0.9
SNHG4-201ENST00000448190 MLECQ14165 292 aa20.69■□□□□ 0.9
SNHG4-201ENST00000448190 SYCP2Q9BX26 1530 aa20.68■□□□□ 0.9
SNHG4-201ENST00000448190 MYOM3Q5VTT5 1437 aa20.68■□□□□ 0.9
SNHG4-201ENST00000448190 PLEKHH2Q8IVE3 1493 aa20.67■□□□□ 0.9
SNHG4-201ENST00000448190 RICTORQ6R327 1708 aa20.67■□□□□ 0.9
SNHG4-201ENST00000448190 MAGI2Q86UL8 1455 aa20.65■□□□□ 0.9
SNHG4-201ENST00000448190 MBD5Q9P267 1494 aa20.65■□□□□ 0.9
SNHG4-201ENST00000448190 ZFYVE16Q7Z3T8 1539 aa20.64■□□□□ 0.9
SNHG4-201ENST00000448190 FAM50AQ14320 339 aaKnown RBP20.64■□□□□ 0.89
SNHG4-201ENST00000448190 CAMSAP2Q08AD1 1489 aa20.63■□□□□ 0.89
SNHG4-201ENST00000448190 TSPY4P0CV99 314 aa20.63■□□□□ 0.89
SNHG4-201ENST00000448190 TSPY10P0CW01 314 aa20.63■□□□□ 0.89
SNHG4-201ENST00000448190 ZMYM4Q5VZL5 1548 aa20.63■□□□□ 0.89
SNHG4-201ENST00000448190 ATP10AO60312 1499 aa20.62■□□□□ 0.89
SNHG4-201ENST00000448190 RSPH4AQ5TD94 716 aa20.62■□□□□ 0.89
SNHG4-201ENST00000448190 MLH3Q9UHC1 1453 aa20.62■□□□□ 0.89
SNHG4-201ENST00000448190 MIA2Q96PC5 1412 aa20.61■□□□□ 0.89
SNHG4-201ENST00000448190 FGD6Q6ZV73 1430 aa20.59■□□□□ 0.89
SNHG4-201ENST00000448190 KDM5CP41229 1560 aa20.59■□□□□ 0.89
SNHG4-201ENST00000448190 ITSN2Q9NZM3 1697 aa20.58■□□□□ 0.89
SNHG4-201ENST00000448190 PLPPR3Q6T4P5 718 aa20.57■□□□□ 0.88
SNHG4-201ENST00000448190 CHIC2Q9UKJ5 165 aa20.57■□□□□ 0.88
SNHG4-201ENST00000448190 ARHGEF40Q8TER5 1519 aa20.57■□□□□ 0.88
SNHG4-201ENST00000448190 C9orf84Q5VXU9 1444 aa20.56■□□□□ 0.88
SNHG4-201ENST00000448190 CCDC141Q6ZP82 1450 aa20.54■□□□□ 0.88
SNHG4-201ENST00000448190 HECW2Q9P2P5 1572 aa20.53■□□□□ 0.88
SNHG4-201ENST00000448190 ITGAEP38570 1179 aa20.52■□□□□ 0.88
SNHG4-201ENST00000448190 RRP7BPQ9NSQ0 103 aa20.51■□□□□ 0.87
SNHG4-201ENST00000448190 DIP2CQ9Y2E4 1556 aa20.51■□□□□ 0.87
SNHG4-201ENST00000448190 GGT6Q6P531 493 aa20.5■□□□□ 0.87
SNHG4-201ENST00000448190 ABCC5O15440 1437 aa20.5■□□□□ 0.87
SNHG4-201ENST00000448190 ATP7AQ04656 1500 aa20.49■□□□□ 0.87
SNHG4-201ENST00000448190 RTEL1-TNFRSF6BF6WH68 1400 aa20.49■□□□□ 0.87
SNHG4-201ENST00000448190 ABCA6Q8N139 1617 aa20.49■□□□□ 0.87
SNHG4-201ENST00000448190 PTPN23Q9H3S7 1636 aa20.49■□□□□ 0.87
SNHG4-201ENST00000448190 KIDINS220Q9ULH0 1771 aa20.49■□□□□ 0.87
SNHG4-201ENST00000448190 KIF3BO15066 747 aa20.47■□□□□ 0.87
SNHG4-201ENST00000448190 SIGLEC1Q9BZZ2 1709 aa20.47■□□□□ 0.87
SNHG4-201ENST00000448190 DHX29Q7Z478 1369 aaKnown RBP20.46■□□□□ 0.87
SNHG4-201ENST00000448190 A2MP01023 1474 aa20.46■□□□□ 0.87
SNHG4-201ENST00000448190 TCOF1Q13428 1488 aaKnown RBP20.46■□□□□ 0.87
SNHG4-201ENST00000448190 CEBPAP49715 358 aaPredicted RBP20.45■□□□□ 0.86
SNHG4-201ENST00000448190 ESF1Q9H501 851 aaKnown RBP20.45■□□□□ 0.86
SNHG4-201ENST00000448190 ARHGEF5Q12774 1597 aa20.45■□□□□ 0.86
SNHG4-201ENST00000448190 DAPK1P53355 1430 aa20.44■□□□□ 0.86
SNHG4-201ENST00000448190 INO80Q9ULG1 1556 aaPredicted RBP20.42■□□□□ 0.86
SNHG4-201ENST00000448190 BCORL1Q5H9F3 1711 aa20.39■□□□□ 0.86
SNHG4-201ENST00000448190 PTPRMP28827 1452 aa20.38■□□□□ 0.85
SNHG4-201ENST00000448190 PTPRKQ15262 1439 aa20.38■□□□□ 0.85
SNHG4-201ENST00000448190 AGLP35573 1532 aa20.37■□□□□ 0.85
SNHG4-201ENST00000448190 KIF15Q9NS87 1388 aa20.37■□□□□ 0.85
SNHG4-201ENST00000448190 ADAMTSL3P82987 1691 aa20.37■□□□□ 0.85
SNHG4-201ENST00000448190 REREQ9P2R6 1566 aa20.36■□□□□ 0.85
SNHG4-201ENST00000448190 ANKRD30AQ9BXX3 1397 aa20.35■□□□□ 0.85
SNHG4-201ENST00000448190 MADDQ8WXG6 1647 aa20.35■□□□□ 0.85
SNHG4-201ENST00000448190 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.35■□□□□ 0.858e-8■■□□□ 13.5
SNHG4-201ENST00000448190 NCOA1Q15788 1441 aa20.33■□□□□ 0.84
SNHG4-201ENST00000448190 MAST1Q9Y2H9 1570 aa20.32■□□□□ 0.84
SNHG4-201ENST00000448190 DNMT1P26358 1616 aaKnown RBP20.31■□□□□ 0.84
SNHG4-201ENST00000448190 WASHC2CQ9Y4E1 1318 aa20.31■□□□□ 0.84
SNHG4-201ENST00000448190 SHANK2Q9UPX8 1470 aa20.3■□□□□ 0.84
SNHG4-201ENST00000448190 RRBP1Q9P2E9 1410 aaKnown RBP20.3■□□□□ 0.84
SNHG4-201ENST00000448190 PLXNC1O60486 1568 aa20.29■□□□□ 0.84
SNHG4-201ENST00000448190 PPP6R1Q9UPN7 881 aa20.29■□□□□ 0.84
SNHG4-201ENST00000448190 ZMYM3Q14202 1370 aa20.29■□□□□ 0.84
SNHG4-201ENST00000448190 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.29■□□□□ 0.84
SNHG4-201ENST00000448190 RIMS1Q86UR5 1692 aaKnown RBP20.28■□□□□ 0.84
SNHG4-201ENST00000448190 ADGBQ8N7X0 1667 aa20.26■□□□□ 0.83
SNHG4-201ENST00000448190 DUOX2Q9NRD8 1548 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms