RNA–Protein interactions for RNA: ENST00000447419.6

PTX4-203, Transcript of pentraxin 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTX4, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX4-203ENST00000447419 DENND4BO75064 1496 aaPredicted RBP32.36■■■□□ 2.77
PTX4-203ENST00000447419 SCAPERQ9BY12 1400 aa32.35■■■□□ 2.77
PTX4-203ENST00000447419 FRMPD1Q5SYB0 1578 aa32.34■■■□□ 2.77
PTX4-203ENST00000447419 CCNB3Q8WWL7 1395 aa32.32■■■□□ 2.76
PTX4-203ENST00000447419 GPATCH8Q9UKJ3 1502 aaKnown RBP32.32■■■□□ 2.76
PTX4-203ENST00000447419 PREX2Q70Z35 1606 aa32.31■■■□□ 2.76
PTX4-203ENST00000447419 CDC42BPBQ9Y5S2 1711 aa32.31■■■□□ 2.76
PTX4-203ENST00000447419 CDC42BPAQ5VT25 1732 aa32.29■■■□□ 2.76
PTX4-203ENST00000447419 LRRC9Q6ZRR7 1453 aa32.28■■■□□ 2.76
PTX4-203ENST00000447419 APLP2Q06481 763 aa32.28■■■□□ 2.76
PTX4-203ENST00000447419 CFDP1Q9UEE9 299 aaPredicted RBP32.26■■■□□ 2.75
PTX4-203ENST00000447419 NCOA2Q15596 1464 aa32.24■■■□□ 2.75
PTX4-203ENST00000447419 POGZQ7Z3K3 1410 aa32.23■■■□□ 2.75
PTX4-203ENST00000447419 AFAP1Q8N556 730 aa32.23■■■□□ 2.75
PTX4-203ENST00000447419 RICTORQ6R327 1708 aa32.23■■■□□ 2.75
PTX4-203ENST00000447419 ARHGEF12Q9NZN5 1544 aa32.2■■■□□ 2.75
PTX4-203ENST00000447419 MAP3K1Q13233 1512 aa32.19■■■□□ 2.74
PTX4-203ENST00000447419 ZNF644Q9H582 1327 aaPredicted RBP32.19■■■□□ 2.74
PTX4-203ENST00000447419 SUPT6HQ7KZ85 1726 aaKnown RBP32.18■■■□□ 2.74
PTX4-203ENST00000447419 HNRNPMP52272 730 aaKnown RBP eCLIP32.16■■■□□ 2.74
PTX4-203ENST00000447419 MYT1LQ9UL68 1186 aa32.16■■■□□ 2.74
PTX4-203ENST00000447419 SAMD9LQ8IVG5 1584 aa32.16■■■□□ 2.74
PTX4-203ENST00000447419 ABCC1P33527 1531 aa32.16■■■□□ 2.74
PTX4-203ENST00000447419 YEATS2Q9ULM3 1422 aa32.16■■■□□ 2.74
PTX4-203ENST00000447419 TRAPPC8Q9Y2L5 1435 aa32.16■■■□□ 2.74
PTX4-203ENST00000447419 KDM4FA0A1W2PPD8 638 aa32.16■■■□□ 2.74
PTX4-203ENST00000447419 SYCP2Q9BX26 1530 aa32.11■■■□□ 2.73
PTX4-203ENST00000447419 ZNF518AQ6AHZ1 1483 aa32.11■■■□□ 2.73
PTX4-203ENST00000447419 ZMYM4Q5VZL5 1548 aa32.1■■■□□ 2.73
PTX4-203ENST00000447419 AEBP2Q6ZN18 517 aaPredicted RBP32.09■■■□□ 2.73
PTX4-203ENST00000447419 ZFYVE16Q7Z3T8 1539 aa32.08■■■□□ 2.73
PTX4-203ENST00000447419 ARID4BQ4LE39 1312 aaPredicted RBP32.08■■■□□ 2.73
PTX4-203ENST00000447419 ITSN2Q9NZM3 1697 aa32.07■■■□□ 2.72
PTX4-203ENST00000447419 ARHGEF40Q8TER5 1519 aa32.06■■■□□ 2.72
PTX4-203ENST00000447419 PPARGC1BQ86YN6 1023 aaKnown RBP32.05■■■□□ 2.72
PTX4-203ENST00000447419 KDM5CP41229 1560 aa32.01■■■□□ 2.72
PTX4-203ENST00000447419 MAGI2Q86UL8 1455 aa32.01■■■□□ 2.71
PTX4-203ENST00000447419 CAMSAP2Q08AD1 1489 aa31.98■■■□□ 2.71
PTX4-203ENST00000447419 PLEKHH2Q8IVE3 1493 aa31.98■■■□□ 2.71
PTX4-203ENST00000447419 KIAA1107Q9UPP5 1409 aa31.98■■■□□ 2.71
PTX4-203ENST00000447419 HECW2Q9P2P5 1572 aa31.97■■■□□ 2.71
PTX4-203ENST00000447419 MYOM3Q5VTT5 1437 aa31.96■■■□□ 2.71
PTX4-203ENST00000447419 SPAG9O60271 1321 aaKnown RBP31.95■■■□□ 2.7
PTX4-203ENST00000447419 MLECQ14165 292 aa31.94■■■□□ 2.7
PTX4-203ENST00000447419 SIGLEC1Q9BZZ2 1709 aa31.93■■■□□ 2.7
PTX4-203ENST00000447419 MBD5Q9P267 1494 aa31.93■■■□□ 2.7
PTX4-203ENST00000447419 ATP10AO60312 1499 aa31.92■■■□□ 2.7
PTX4-203ENST00000447419 MLH3Q9UHC1 1453 aa31.92■■■□□ 2.7
PTX4-203ENST00000447419 ABCA6Q8N139 1617 aa31.89■■■□□ 2.7
PTX4-203ENST00000447419 DIP2CQ9Y2E4 1556 aa31.88■■■□□ 2.69
PTX4-203ENST00000447419 C9orf84Q5VXU9 1444 aa31.88■■■□□ 2.69
PTX4-203ENST00000447419 KIDINS220Q9ULH0 1771 aa31.86■■■□□ 2.69
PTX4-203ENST00000447419 MIA2Q96PC5 1412 aa31.83■■■□□ 2.69
PTX4-203ENST00000447419 ATP7AQ04656 1500 aa31.82■■■□□ 2.68
PTX4-203ENST00000447419 CCDC141Q6ZP82 1450 aa31.81■■■□□ 2.68
PTX4-203ENST00000447419 FGD6Q6ZV73 1430 aa31.79■■■□□ 2.68
PTX4-203ENST00000447419 BCORL1Q5H9F3 1711 aa31.79■■■□□ 2.68
PTX4-203ENST00000447419 INO80Q9ULG1 1556 aaPredicted RBP31.78■■■□□ 2.68
PTX4-203ENST00000447419 PLPPR3Q6T4P5 718 aa31.77■■■□□ 2.68
PTX4-203ENST00000447419 PTPN23Q9H3S7 1636 aa31.75■■■□□ 2.67
PTX4-203ENST00000447419 ADAMTSL3P82987 1691 aa31.74■■■□□ 2.67
PTX4-203ENST00000447419 MADDQ8WXG6 1647 aa31.74■■■□□ 2.67
PTX4-203ENST00000447419 TSPY4P0CV99 314 aa31.73■■■□□ 2.67
PTX4-203ENST00000447419 TSPY10P0CW01 314 aa31.73■■■□□ 2.67
PTX4-203ENST00000447419 FAM50AQ14320 339 aaKnown RBP31.72■■■□□ 2.67
PTX4-203ENST00000447419 ARHGEF5Q12774 1597 aa31.72■■■□□ 2.67
PTX4-203ENST00000447419 RSPH4AQ5TD94 716 aa31.71■■■□□ 2.67
PTX4-203ENST00000447419 A2MP01023 1474 aa31.68■■■□□ 2.66
PTX4-203ENST00000447419 REREQ9P2R6 1566 aa31.67■■■□□ 2.66
PTX4-203ENST00000447419 RTEL1-TNFRSF6BF6WH68 1400 aa31.67■■■□□ 2.66
PTX4-203ENST00000447419 PTPRMP28827 1452 aa31.65■■■□□ 2.66
PTX4-203ENST00000447419 TCOF1Q13428 1488 aaKnown RBP31.65■■■□□ 2.66
PTX4-203ENST00000447419 RIMS1Q86UR5 1692 aaKnown RBP31.64■■■□□ 2.65
PTX4-203ENST00000447419 ABCC5O15440 1437 aa31.64■■■□□ 2.65
PTX4-203ENST00000447419 CHIC2Q9UKJ5 165 aa31.62■■■□□ 2.65
PTX4-203ENST00000447419 AGLP35573 1532 aa31.61■■■□□ 2.65
PTX4-203ENST00000447419 DAPK1P53355 1430 aa31.6■■■□□ 2.65
PTX4-203ENST00000447419 PLXNC1O60486 1568 aa31.59■■■□□ 2.65
PTX4-203ENST00000447419 GGT6Q6P531 493 aa31.59■■■□□ 2.65
PTX4-203ENST00000447419 DHX29Q7Z478 1369 aaKnown RBP31.57■■■□□ 2.64
PTX4-203ENST00000447419 ADGBQ8N7X0 1667 aa31.57■■■□□ 2.64
PTX4-203ENST00000447419 CEBPAP49715 358 aaPredicted RBP31.56■■■□□ 2.64
PTX4-203ENST00000447419 FER1L4A9Z1Z3 1794 aa31.55■■■□□ 2.64
PTX4-203ENST00000447419 RRP7BPQ9NSQ0 103 aa31.54■■■□□ 2.64
PTX4-203ENST00000447419 KIF3BO15066 747 aa31.54■■■□□ 2.64
PTX4-203ENST00000447419 DNMT1P26358 1616 aaKnown RBP31.53■■■□□ 2.64
PTX4-203ENST00000447419 MAST1Q9Y2H9 1570 aa31.53■■■□□ 2.64
PTX4-203ENST00000447419 ESF1Q9H501 851 aaKnown RBP31.53■■■□□ 2.64
PTX4-203ENST00000447419 ITGAEP38570 1179 aa31.52■■■□□ 2.64
PTX4-203ENST00000447419 CROCC2H7BZ55 1655 aa31.5■■■□□ 2.63
PTX4-203ENST00000447419 SHANK2Q9UPX8 1470 aa31.47■■■□□ 2.63
PTX4-203ENST00000447419 KIF15Q9NS87 1388 aa31.46■■■□□ 2.63
PTX4-203ENST00000447419 PTPRKQ15262 1439 aa31.43■■■□□ 2.62
PTX4-203ENST00000447419 ANKRD30AQ9BXX3 1397 aa31.39■■■□□ 2.62
PTX4-203ENST00000447419 DUOX2Q9NRD8 1548 aa31.36■■■□□ 2.61
PTX4-203ENST00000447419 NCOA1Q15788 1441 aa31.35■■■□□ 2.61
PTX4-203ENST00000447419 CLTCQ00610 1675 aaKnown RBP31.34■■■□□ 2.61
PTX4-203ENST00000447419 ZMYM3Q14202 1370 aa31.34■■■□□ 2.61
PTX4-203ENST00000447419 CNTLNQ9NXG0 1405 aa31.33■■■□□ 2.61
PTX4-203ENST00000447419 RRBP1Q9P2E9 1410 aaKnown RBP31.31■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 167.1 ms