RNA–Protein interactions for RNA: ENST00000447009.1

APTR-205, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 2 BASIC

Gene APTR, Length 902 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-205ENST00000447009 SCAPERQ9BY12 1400 aa33.79■■■■□ 3
APTR-205ENST00000447009 LRRIQ1Q96JM4 1722 aa33.79■■■■□ 3
APTR-205ENST00000447009 POGZQ7Z3K3 1410 aa33.79■■■■□ 3
APTR-205ENST00000447009 MAGI2Q86UL8 1455 aa33.76■■■□□ 2.99
APTR-205ENST00000447009 PCF11O94913 1555 aaKnown RBP33.75■■■□□ 2.99
APTR-205ENST00000447009 CDK11AQ9UQ88 783 aaPredicted RBP33.74■■■□□ 2.99
APTR-205ENST00000447009 TROQ12816 1431 aaPredicted RBP33.71■■■□□ 2.99
APTR-205ENST00000447009 PLPPR3Q6T4P5 718 aa33.7■■■□□ 2.99
APTR-205ENST00000447009 LMTK3Q96Q04 1460 aa33.69■■■□□ 2.98
APTR-205ENST00000447009 EFCAB2Q5VUJ9 269 aa33.68■■■□□ 2.98
APTR-205ENST00000447009 CLIP1P30622 1438 aa33.68■■■□□ 2.98
APTR-205ENST00000447009 FER1L4A9Z1Z3 1794 aa33.67■■■□□ 2.98
APTR-205ENST00000447009 ARHGAP5Q13017 1502 aa33.67■■■□□ 2.98
APTR-205ENST00000447009 MLECQ14165 292 aa33.66■■■□□ 2.98
APTR-205ENST00000447009 ATP10AO60312 1499 aa33.6■■■□□ 2.97
APTR-205ENST00000447009 C9orf84Q5VXU9 1444 aa33.6■■■□□ 2.97
APTR-205ENST00000447009 CDC42BPBQ9Y5S2 1711 aa33.58■■■□□ 2.97
APTR-205ENST00000447009 ZNF518AQ6AHZ1 1483 aa33.57■■■□□ 2.97
APTR-205ENST00000447009 CASKIN1Q8WXD9 1431 aa33.55■■■□□ 2.96
APTR-205ENST00000447009 CCDC18Q5T9S5 1454 aa33.55■■■□□ 2.96
APTR-205ENST00000447009 KDM5CP41229 1560 aa33.55■■■□□ 2.96
APTR-205ENST00000447009 ARHGEF12Q9NZN5 1544 aa33.53■■■□□ 2.96
APTR-205ENST00000447009 PREX2Q70Z35 1606 aa33.53■■■□□ 2.96
APTR-205ENST00000447009 HSPA2P54652 639 aa33.51■■■□□ 2.95
APTR-205ENST00000447009 AFAP1Q8N556 730 aa33.5■■■□□ 2.95
APTR-205ENST00000447009 MYT1LQ9UL68 1186 aa33.49■■■□□ 2.95
APTR-205ENST00000447009 DIP2CQ9Y2E4 1556 aa33.47■■■□□ 2.95
APTR-205ENST00000447009 ABCC1P33527 1531 aa33.45■■■□□ 2.95
APTR-205ENST00000447009 ITSN2Q9NZM3 1697 aa33.45■■■□□ 2.94
APTR-205ENST00000447009 ABCA6Q8N139 1617 aa33.44■■■□□ 2.94
APTR-205ENST00000447009 CDC42BPAQ5VT25 1732 aa33.44■■■□□ 2.94
APTR-205ENST00000447009 FYCO1Q9BQS8 1478 aa33.44■■■□□ 2.94
APTR-205ENST00000447009 FBXO41Q8TF61 875 aa33.43■■■□□ 2.94
APTR-205ENST00000447009 TRAPPC8Q9Y2L5 1435 aa33.39■■■□□ 2.94
APTR-205ENST00000447009 PREX1Q8TCU6 1659 aa33.38■■■□□ 2.93
APTR-205ENST00000447009 REREQ9P2R6 1566 aa33.37■■■□□ 2.93
APTR-205ENST00000447009 MLH3Q9UHC1 1453 aa33.37■■■□□ 2.93
APTR-205ENST00000447009 CEBPAP49715 358 aaPredicted RBP33.35■■■□□ 2.93
APTR-205ENST00000447009 KIDINS220Q9ULH0 1771 aa33.3■■■□□ 2.92
APTR-205ENST00000447009 SAMD9LQ8IVG5 1584 aa33.28■■■□□ 2.92
APTR-205ENST00000447009 ZNF777Q9ULD5 760 aaPredicted RBP33.26■■■□□ 2.91
APTR-205ENST00000447009 AGLP35573 1532 aa33.25■■■□□ 2.91
APTR-205ENST00000447009 SYCP2Q9BX26 1530 aa33.25■■■□□ 2.91
APTR-205ENST00000447009 C3P01024 1663 aa33.24■■■□□ 2.91
APTR-205ENST00000447009 GPATCH8Q9UKJ3 1502 aaKnown RBP33.23■■■□□ 2.91
APTR-205ENST00000447009 UHRF1BP1Q6BDS2 1440 aa33.19■■■□□ 2.9
APTR-205ENST00000447009 SETD1BQ9UPS6 1966 aaKnown RBP33.16■■■□□ 2.9
APTR-205ENST00000447009 ESF1Q9H501 851 aaKnown RBP33.16■■■□□ 2.9
APTR-205ENST00000447009 STRCQ7RTU9 1775 aa33.14■■■□□ 2.9
APTR-205ENST00000447009 HNRNPMP52272 730 aaKnown RBP eCLIP33.13■■■□□ 2.89
APTR-205ENST00000447009 MTUS2Q5JR59 1369 aa33.12■■■□□ 2.89
APTR-205ENST00000447009 CCNB3Q8WWL7 1395 aa33.12■■■□□ 2.89
APTR-205ENST00000447009 SUPT6HQ7KZ85 1726 aaKnown RBP33.12■■■□□ 2.89
APTR-205ENST00000447009 SPAG9O60271 1321 aaKnown RBP33.11■■■□□ 2.89
APTR-205ENST00000447009 ATP7AQ04656 1500 aa33.09■■■□□ 2.89
APTR-205ENST00000447009 CFDP1Q9UEE9 299 aaPredicted RBP33.09■■■□□ 2.89
APTR-205ENST00000447009 CERKQ8TCT0 537 aa33.08■■■□□ 2.89
APTR-205ENST00000447009 INO80Q9ULG1 1556 aaPredicted RBP33.08■■■□□ 2.89
APTR-205ENST00000447009 PLEKHH2Q8IVE3 1493 aa33.07■■■□□ 2.88
APTR-205ENST00000447009 CNTLNQ9NXG0 1405 aa33.07■■■□□ 2.88
APTR-205ENST00000447009 KIAA1107Q9UPP5 1409 aa33.05■■■□□ 2.88
APTR-205ENST00000447009 TIAM1Q13009 1591 aa33.04■■■□□ 2.88
APTR-205ENST00000447009 EHBP1L1Q8N3D4 1523 aa33.03■■■□□ 2.88
APTR-205ENST00000447009 MROH2AA6NES4 1674 aa33.03■■■□□ 2.88
APTR-205ENST00000447009 PLXNC1O60486 1568 aa33■■■□□ 2.87
APTR-205ENST00000447009 CEP162Q5TB80 1403 aa32.99■■■□□ 2.87
APTR-205ENST00000447009 DMRT2Q9Y5R5 561 aa32.98■■■□□ 2.87
APTR-205ENST00000447009 A2MP01023 1474 aa32.98■■■□□ 2.87
APTR-205ENST00000447009 CLTCQ00610 1675 aaKnown RBP32.97■■■□□ 2.87
APTR-205ENST00000447009 ZNF644Q9H582 1327 aaPredicted RBP32.94■■■□□ 2.86
APTR-205ENST00000447009 ADGBQ8N7X0 1667 aa32.93■■■□□ 2.86
APTR-205ENST00000447009 ZMYM3Q14202 1370 aa32.91■■■□□ 2.86
APTR-205ENST00000447009 NPATQ14207 1427 aa32.91■■■□□ 2.86
APTR-205ENST00000447009 PTPRTO14522 1441 aa32.89■■■□□ 2.86
APTR-205ENST00000447009 NCOA1Q15788 1441 aa32.87■■■□□ 2.85
APTR-205ENST00000447009 MBD5Q9P267 1494 aa32.86■■■□□ 2.85
APTR-205ENST00000447009 GGT6Q6P531 493 aa32.86■■■□□ 2.85
APTR-205ENST00000447009 CAMSAP1Q5T5Y3 1602 aa32.85■■■□□ 2.85
APTR-205ENST00000447009 MYO3AQ8NEV4 1616 aa32.84■■■□□ 2.85
APTR-205ENST00000447009 NCOA2Q15596 1464 aa32.81■■■□□ 2.84
APTR-205ENST00000447009 ZNF142P52746 1687 aaPredicted RBP32.8■■■□□ 2.84
APTR-205ENST00000447009 CAMSAP2Q08AD1 1489 aa32.78■■■□□ 2.84
APTR-205ENST00000447009 RTEL1-TNFRSF6BF6WH68 1400 aa32.77■■■□□ 2.84
APTR-205ENST00000447009 PTPRKQ15262 1439 aa32.77■■■□□ 2.84
APTR-205ENST00000447009 CEP170BQ9Y4F5 1589 aaPredicted RBP32.75■■■□□ 2.83
APTR-205ENST00000447009 CCDC141Q6ZP82 1450 aa32.75■■■□□ 2.83
APTR-205ENST00000447009 LTBP4Q8N2S1 1624 aa32.74■■■□□ 2.83
APTR-205ENST00000447009 NCKAP5LQ9HCH0 1330 aa32.71■■■□□ 2.83
APTR-205ENST00000447009 DHX29Q7Z478 1369 aaKnown RBP32.7■■■□□ 2.83
APTR-205ENST00000447009 PPP6R1Q9UPN7 881 aa32.68■■■□□ 2.82
APTR-205ENST00000447009 VPS8Q8N3P4 1428 aa32.65■■■□□ 2.82
APTR-205ENST00000447009 PLA2R1Q13018 1463 aa32.65■■■□□ 2.82
APTR-205ENST00000447009 KIF3BO15066 747 aa32.64■■■□□ 2.82
APTR-205ENST00000447009 ARHGEF5Q12774 1597 aa32.62■■■□□ 2.81
APTR-205ENST00000447009 KDM5DQ9BY66 1539 aa32.61■■■□□ 2.81
APTR-205ENST00000447009 LOC105371045A0A1W2PR82 267 aa32.61■■■□□ 2.81
APTR-205ENST00000447009 LRRC9Q6ZRR7 1453 aa32.61■■■□□ 2.81
APTR-205ENST00000447009 TCOF1Q13428 1488 aaKnown RBP32.6■■■□□ 2.81
APTR-205ENST00000447009 A2ML1A8K2U0 1454 aa32.59■■■□□ 2.81
APTR-205ENST00000447009 IQSEC2Q5JU85 1478 aa32.59■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms