RNA–Protein interactions for RNA: ENST00000446996.5

APOE-204, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-204ENST00000446996 CDC42BPBQ9Y5S2 1711 aa34.51■■■■□ 3.12
APOE-204ENST00000446996 SUPT6HQ7KZ85 1726 aaKnown RBP34.5■■■■□ 3.11
APOE-204ENST00000446996 ARHGAP5Q13017 1502 aa34.47■■■■□ 3.11
APOE-204ENST00000446996 GPATCH8Q9UKJ3 1502 aaKnown RBP34.47■■■■□ 3.11
APOE-204ENST00000446996 CCNB3Q8WWL7 1395 aa34.47■■■■□ 3.11
APOE-204ENST00000446996 KANK4Q5T7N3 995 aaPredicted RBP34.44■■■■□ 3.1
APOE-204ENST00000446996 NCOA2Q15596 1464 aa34.43■■■■□ 3.1
APOE-204ENST00000446996 DENND4BO75064 1496 aaPredicted RBP34.4■■■■□ 3.1
APOE-204ENST00000446996 ADGRL1O94910 1474 aa34.39■■■■□ 3.1
APOE-204ENST00000446996 ITSN2Q9NZM3 1697 aa34.38■■■■□ 3.09
APOE-204ENST00000446996 AEBP2Q6ZN18 517 aaPredicted RBP34.37■■■■□ 3.09
APOE-204ENST00000446996 SCAPERQ9BY12 1400 aa34.36■■■■□ 3.09
APOE-204ENST00000446996 CFDP1Q9UEE9 299 aaPredicted RBP34.35■■■■□ 3.09
APOE-204ENST00000446996 RICTORQ6R327 1708 aa34.33■■■■□ 3.09
APOE-204ENST00000446996 RAPGEF3O95398 923 aa34.32■■■■□ 3.08
APOE-204ENST00000446996 FRMPD1Q5SYB0 1578 aa34.3■■■■□ 3.08
APOE-204ENST00000446996 PLEKHH2Q8IVE3 1493 aa34.28■■■■□ 3.08
APOE-204ENST00000446996 ABCC1P33527 1531 aa34.28■■■■□ 3.08
APOE-204ENST00000446996 POGZQ7Z3K3 1410 aa34.28■■■■□ 3.08
APOE-204ENST00000446996 KIAA1107Q9UPP5 1409 aa34.26■■■■□ 3.07
APOE-204ENST00000446996 SAMD9LQ8IVG5 1584 aa34.26■■■■□ 3.07
APOE-204ENST00000446996 ZMYM4Q5VZL5 1548 aa34.24■■■■□ 3.07
APOE-204ENST00000446996 ZNF518AQ6AHZ1 1483 aa34.23■■■■□ 3.07
APOE-204ENST00000446996 ZNF777Q9ULD5 760 aaPredicted RBP34.23■■■■□ 3.07
APOE-204ENST00000446996 MAGI2Q86UL8 1455 aa34.21■■■■□ 3.07
APOE-204ENST00000446996 MYOM3Q5VTT5 1437 aa34.2■■■■□ 3.06
APOE-204ENST00000446996 MIA2Q96PC5 1412 aa34.2■■■■□ 3.06
APOE-204ENST00000446996 ARHGEF12Q9NZN5 1544 aa34.2■■■■□ 3.06
APOE-204ENST00000446996 KDM5CP41229 1560 aa34.17■■■■□ 3.06
APOE-204ENST00000446996 SYCP2Q9BX26 1530 aa34.14■■■■□ 3.06
APOE-204ENST00000446996 TRAPPC8Q9Y2L5 1435 aa34.13■■■■□ 3.05
APOE-204ENST00000446996 AFAP1Q8N556 730 aa34.13■■■■□ 3.05
APOE-204ENST00000446996 RSPH4AQ5TD94 716 aa34.11■■■■□ 3.05
APOE-204ENST00000446996 ZNF644Q9H582 1327 aaPredicted RBP34.1■■■■□ 3.05
APOE-204ENST00000446996 HNRNPMP52272 730 aaKnown RBP eCLIP34.1■■■■□ 3.05
APOE-204ENST00000446996 CAMSAP2Q08AD1 1489 aa34.09■■■■□ 3.05
APOE-204ENST00000446996 MLH3Q9UHC1 1453 aa34.09■■■■□ 3.05
APOE-204ENST00000446996 MBD5Q9P267 1494 aa34.08■■■■□ 3.05
APOE-204ENST00000446996 ZFYVE16Q7Z3T8 1539 aa34.07■■■■□ 3.04
APOE-204ENST00000446996 ARHGEF40Q8TER5 1519 aa34.07■■■■□ 3.04
APOE-204ENST00000446996 HECW2Q9P2P5 1572 aa34.05■■■■□ 3.04
APOE-204ENST00000446996 KDM4FA0A1W2PPD8 638 aa34.01■■■■□ 3.03
APOE-204ENST00000446996 FGD6Q6ZV73 1430 aa34.01■■■■□ 3.03
APOE-204ENST00000446996 ARHGEF5Q12774 1597 aa34.01■■■■□ 3.03
APOE-204ENST00000446996 YEATS2Q9ULM3 1422 aa34■■■■□ 3.03
APOE-204ENST00000446996 SPAG9O60271 1321 aaKnown RBP33.98■■■■□ 3.03
APOE-204ENST00000446996 PTPN23Q9H3S7 1636 aa33.97■■■■□ 3.03
APOE-204ENST00000446996 ATP10AO60312 1499 aa33.97■■■■□ 3.03
APOE-204ENST00000446996 CCDC141Q6ZP82 1450 aa33.97■■■■□ 3.03
APOE-204ENST00000446996 TCOF1Q13428 1488 aaKnown RBP33.96■■■■□ 3.03
APOE-204ENST00000446996 KIDINS220Q9ULH0 1771 aa33.96■■■■□ 3.03
APOE-204ENST00000446996 MYT1LQ9UL68 1186 aa33.94■■■■□ 3.02
APOE-204ENST00000446996 RTEL1-TNFRSF6BF6WH68 1400 aa33.94■■■■□ 3.02
APOE-204ENST00000446996 INO80Q9ULG1 1556 aaPredicted RBP33.91■■■■□ 3.02
APOE-204ENST00000446996 DIP2CQ9Y2E4 1556 aa33.91■■■■□ 3.02
APOE-204ENST00000446996 C9orf84Q5VXU9 1444 aa33.91■■■■□ 3.02
APOE-204ENST00000446996 REREQ9P2R6 1566 aa33.9■■■■□ 3.02
APOE-204ENST00000446996 ATP7AQ04656 1500 aa33.9■■■■□ 3.02
APOE-204ENST00000446996 TSPY4P0CV99 314 aa33.88■■■■□ 3.01
APOE-204ENST00000446996 TSPY10P0CW01 314 aa33.88■■■■□ 3.01
APOE-204ENST00000446996 ABCA6Q8N139 1617 aa33.88■■■■□ 3.01
APOE-204ENST00000446996 PPARGC1BQ86YN6 1023 aaKnown RBP33.85■■■■□ 3.01
APOE-204ENST00000446996 MAST1Q9Y2H9 1570 aa33.83■■■■□ 3.01
APOE-204ENST00000446996 ARID4BQ4LE39 1312 aaPredicted RBP33.79■■■■□ 3
APOE-204ENST00000446996 DNMT1P26358 1616 aaKnown RBP33.79■■■■□ 3
APOE-204ENST00000446996 AGLP35573 1532 aa33.79■■■■□ 3
APOE-204ENST00000446996 ADGBQ8N7X0 1667 aa33.77■■■■□ 3
APOE-204ENST00000446996 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.77■■■■□ 3
APOE-204ENST00000446996 ABCC5O15440 1437 aa33.77■■■■□ 3
APOE-204ENST00000446996 SHANK2Q9UPX8 1470 aa33.76■■■■□ 3
APOE-204ENST00000446996 BCORL1Q5H9F3 1711 aa33.76■■■■□ 3
APOE-204ENST00000446996 SIGLEC1Q9BZZ2 1709 aa33.76■■■■□ 3
APOE-204ENST00000446996 DAPK1P53355 1430 aa33.75■■■□□ 2.99
APOE-204ENST00000446996 CROCC2H7BZ55 1655 aa33.74■■■□□ 2.99
APOE-204ENST00000446996 A2MP01023 1474 aa33.73■■■□□ 2.99
APOE-204ENST00000446996 FAM50AQ14320 339 aaKnown RBP33.72■■■□□ 2.99
APOE-204ENST00000446996 ADAMTSL3P82987 1691 aa33.71■■■□□ 2.99
APOE-204ENST00000446996 PLXNC1O60486 1568 aa33.7■■■□□ 2.99
APOE-204ENST00000446996 DHX29Q7Z478 1369 aaKnown RBP33.69■■■□□ 2.98
APOE-204ENST00000446996 RRBP1Q9P2E9 1410 aaKnown RBP33.69■■■□□ 2.98
APOE-204ENST00000446996 ADGRL2O95490 1459 aa33.58■■■□□ 2.97
APOE-204ENST00000446996 ANKRD30AQ9BXX3 1397 aa33.58■■■□□ 2.97
APOE-204ENST00000446996 MLECQ14165 292 aa33.56■■■□□ 2.96
APOE-204ENST00000446996 DUOX2Q9NRD8 1548 aa33.56■■■□□ 2.96
APOE-204ENST00000446996 MADDQ8WXG6 1647 aa33.56■■■□□ 2.96
APOE-204ENST00000446996 NCOA1Q15788 1441 aa33.54■■■□□ 2.96
APOE-204ENST00000446996 PPP6R1Q9UPN7 881 aa33.54■■■□□ 2.96
APOE-204ENST00000446996 KIF15Q9NS87 1388 aa33.52■■■□□ 2.96
APOE-204ENST00000446996 FER1L4A9Z1Z3 1794 aa33.52■■■□□ 2.96
APOE-204ENST00000446996 CHIC2Q9UKJ5 165 aa33.51■■■□□ 2.95
APOE-204ENST00000446996 EIF2AK4Q9P2K8 1649 aaKnown RBP33.5■■■□□ 2.95
APOE-204ENST00000446996 PTPRKQ15262 1439 aa33.49■■■□□ 2.95
APOE-204ENST00000446996 ROCK1Q13464 1354 aa33.48■■■□□ 2.95
APOE-204ENST00000446996 RRP7BPQ9NSQ0 103 aa33.48■■■□□ 2.95
APOE-204ENST00000446996 KIF3BO15066 747 aa33.47■■■□□ 2.95
APOE-204ENST00000446996 PTPRMP28827 1452 aa33.47■■■□□ 2.95
APOE-204ENST00000446996 ERBINQ96RT1 1412 aa33.46■■■□□ 2.95
APOE-204ENST00000446996 RIMS1Q86UR5 1692 aaKnown RBP33.46■■■□□ 2.95
APOE-204ENST00000446996 CNTLNQ9NXG0 1405 aa33.45■■■□□ 2.94
APOE-204ENST00000446996 GGT6Q6P531 493 aa33.42■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms