RNA–Protein interactions for RNA: ENST00000446273.1

TNRC6B-205, Transcript of trinucleotide repeat containing 6B, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TNRC6B, Length 4,741 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-205ENST00000446273 CARD11Q9BXL7 1154 aa10.98□□□□□ -0.65
TNRC6B-205ENST00000446273 RGL3Q3MIN7 710 aa10.97□□□□□ -0.65
TNRC6B-205ENST00000446273 EHBP1L1Q8N3D4 1523 aa10.97□□□□□ -0.65
TNRC6B-205ENST00000446273 SPAG9O60271 1321 aaKnown RBP10.97□□□□□ -0.65
TNRC6B-205ENST00000446273 ROCK2O75116 1388 aaKnown RBP10.97□□□□□ -0.65
TNRC6B-205ENST00000446273 WDR43Q15061 677 aaKnown RBP eCLIP10.97□□□□□ -0.65
TNRC6B-205ENST00000446273 URB2Q14146 1524 aaKnown RBP10.97□□□□□ -0.65
TNRC6B-205ENST00000446273 UACAQ9BZF9 1416 aa10.97□□□□□ -0.65
TNRC6B-205ENST00000446273 CANXP27824 592 aaKnown RBP10.97□□□□□ -0.65
TNRC6B-205ENST00000446273 SENP3Q9H4L4 574 aaPredicted RBP10.96□□□□□ -0.66
TNRC6B-205ENST00000446273 HNRNPMP52272 730 aaKnown RBP eCLIP10.95□□□□□ -0.66
TNRC6B-205ENST00000446273 MIA2Q96PC5 1412 aa10.94□□□□□ -0.66
TNRC6B-205ENST00000446273 NPM2Q86SE8 214 aaKnown RBP10.93□□□□□ -0.66
TNRC6B-205ENST00000446273 KIF3BO15066 747 aa10.93□□□□□ -0.66
TNRC6B-205ENST00000446273 CCDC136Q96JN2 1154 aa10.93□□□□□ -0.66
TNRC6B-205ENST00000446273 HECW1Q76N89 1606 aa10.92□□□□□ -0.66
TNRC6B-205ENST00000446273 SYNJ2O15056 1496 aa10.92□□□□□ -0.66
TNRC6B-205ENST00000446273 MAGI1Q96QZ7 1491 aaPredicted RBP10.92□□□□□ -0.66
TNRC6B-205ENST00000446273 HSPA5P11021 654 aaKnown RBP10.92□□□□□ -0.66
TNRC6B-205ENST00000446273 PHLDB1Q86UU1 1377 aa10.92□□□□□ -0.66
TNRC6B-205ENST00000446273 NCOA2Q15596 1464 aa10.92□□□□□ -0.66
TNRC6B-205ENST00000446273 CFAP53Q96M91 514 aa10.91□□□□□ -0.66
TNRC6B-205ENST00000446273 HAP1P54257 671 aaPredicted RBP10.91□□□□□ -0.66
TNRC6B-205ENST00000446273 POGKQ9P215 609 aa10.91□□□□□ -0.66
TNRC6B-205ENST00000446273 PKD2Q13563 968 aa10.9□□□□□ -0.66
TNRC6B-205ENST00000446273 TMF1P82094 1093 aa10.9□□□□□ -0.66
TNRC6B-205ENST00000446273 HIRIP3Q9BW71 556 aaPredicted RBP10.9□□□□□ -0.66
TNRC6B-205ENST00000446273 KIAA0586Q9BVV6 1533 aa10.9□□□□□ -0.67
TNRC6B-205ENST00000446273 NUP155O75694 1391 aa10.89□□□□□ -0.67
TNRC6B-205ENST00000446273 PPP4R2Q9NY27 417 aa10.89□□□□□ -0.67
TNRC6B-205ENST00000446273 KNSTRNQ9Y448 316 aa10.89□□□□□ -0.67
TNRC6B-205ENST00000446273 ZNF608Q9ULD9 1512 aaPredicted RBP10.89□□□□□ -0.67
TNRC6B-205ENST00000446273 SUPT6HQ7KZ85 1726 aaKnown RBP10.88□□□□□ -0.67
TNRC6B-205ENST00000446273 RALBP1Q15311 655 aa10.88□□□□□ -0.67
TNRC6B-205ENST00000446273 STAC3Q96MF2 364 aa10.88□□□□□ -0.67
TNRC6B-205ENST00000446273 EID1Q9Y6B2 187 aa10.88□□□□□ -0.67
TNRC6B-205ENST00000446273 WASHC2CQ9Y4E1 1318 aa10.87□□□□□ -0.67
TNRC6B-205ENST00000446273 HFM1A2PYH4 1435 aa10.87□□□□□ -0.67
TNRC6B-205ENST00000446273 THOC2Q8NI27 1593 aaKnown RBP10.87□□□□□ -0.67
TNRC6B-205ENST00000446273 GRIN2AQ12879 1464 aa10.85□□□□□ -0.67
TNRC6B-205ENST00000446273 SUPT16HQ9Y5B9 1047 aaKnown RBP10.85□□□□□ -0.67
TNRC6B-205ENST00000446273 PNNQ9H307 717 aaKnown RBP10.85□□□□□ -0.67
TNRC6B-205ENST00000446273 PRDM2Q13029 1718 aa10.85□□□□□ -0.67
TNRC6B-205ENST00000446273 DCAF11Q8TEB1 546 aa10.84□□□□□ -0.67
TNRC6B-205ENST00000446273 L3MBTL2Q969R5 705 aa10.84□□□□□ -0.67
TNRC6B-205ENST00000446273 UPF2Q9HAU5 1272 aaKnown RBP10.84□□□□□ -0.67
TNRC6B-205ENST00000446273 EIF3AQ14152 1382 aaKnown RBP10.84□□□□□ -0.67
TNRC6B-205ENST00000446273 KTN1Q86UP2 1357 aaKnown RBP10.83□□□□□ -0.68
TNRC6B-205ENST00000446273 NUDCQ9Y266 331 aa10.83□□□□□ -0.68
TNRC6B-205ENST00000446273 IQGAP2Q13576 1575 aa10.82□□□□□ -0.68
TNRC6B-205ENST00000446273 EIF5BO60841 1220 aaKnown RBP10.82□□□□□ -0.68
TNRC6B-205ENST00000446273 ROCK1Q13464 1354 aa10.81□□□□□ -0.68
TNRC6B-205ENST00000446273 PLEKHH2Q8IVE3 1493 aa10.81□□□□□ -0.68
TNRC6B-205ENST00000446273 PCF11O94913 1555 aaKnown RBP10.8□□□□□ -0.68
TNRC6B-205ENST00000446273 TROQ12816 1431 aaPredicted RBP10.8□□□□□ -0.68
TNRC6B-205ENST00000446273 AEBP2Q6ZN18 517 aaPredicted RBP10.8□□□□□ -0.68
TNRC6B-205ENST00000446273 DDRGK1Q96HY6 314 aa10.8□□□□□ -0.68
TNRC6B-205ENST00000446273 PDE3BQ13370 1112 aa10.79□□□□□ -0.68
TNRC6B-205ENST00000446273 CCDC144AA2RUR9 1427 aa10.79□□□□□ -0.68
TNRC6B-205ENST00000446273 MS4A1P11836 297 aa10.79□□□□□ -0.68
TNRC6B-205ENST00000446273 KIF15Q9NS87 1388 aa10.78□□□□□ -0.68
TNRC6B-205ENST00000446273 AKNAQ7Z591 1439 aa10.78□□□□□ -0.68
TNRC6B-205ENST00000446273 CHMP4AQ9BY43 222 aa10.77□□□□□ -0.69
TNRC6B-205ENST00000446273 PLEKHG5O94827 1062 aa10.77□□□□□ -0.69
TNRC6B-205ENST00000446273 CHMP4BQ9H444 224 aaKnown RBP10.76□□□□□ -0.69
TNRC6B-205ENST00000446273 EPRSP07814 1512 aaKnown RBP10.76□□□□□ -0.69
TNRC6B-205ENST00000446273 ANKRD50Q9ULJ7 1429 aa10.76□□□□□ -0.69
TNRC6B-205ENST00000446273 HDGFL2Q7Z4V5 671 aaPredicted RBP10.75□□□□□ -0.69
TNRC6B-205ENST00000446273 NLRP13Q86W25 1043 aa10.75□□□□□ -0.69
TNRC6B-205ENST00000446273 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.74□□□□□ -0.69
TNRC6B-205ENST00000446273 AFAP1Q8N556 730 aa10.74□□□□□ -0.69
TNRC6B-205ENST00000446273 KIF21AQ7Z4S6 1674 aa10.74□□□□□ -0.69
TNRC6B-205ENST00000446273 ZBTB7CA1YPR0 619 aa10.73□□□□□ -0.69
TNRC6B-205ENST00000446273 LMOD2Q6P5Q4 547 aa10.73□□□□□ -0.69
TNRC6B-205ENST00000446273 WDR62O43379 1518 aa10.73□□□□□ -0.69
TNRC6B-205ENST00000446273 NGEFQ8N5V2 710 aa10.73□□□□□ -0.69
TNRC6B-205ENST00000446273 ARHGAP5Q13017 1502 aa10.73□□□□□ -0.69
TNRC6B-205ENST00000446273 CTTNBP2Q8WZ74 1663 aa10.73□□□□□ -0.69
TNRC6B-205ENST00000446273 ZNF644Q9H582 1327 aaPredicted RBP10.72□□□□□ -0.69
TNRC6B-205ENST00000446273 FOXD1Q16676 465 aa10.72□□□□□ -0.69
TNRC6B-205ENST00000446273 CNTLNQ9NXG0 1405 aa10.72□□□□□ -0.69
TNRC6B-205ENST00000446273 USP47Q96K76 1375 aa10.72□□□□□ -0.69
TNRC6B-205ENST00000446273 VGFO15240 615 aaPredicted RBP10.72□□□□□ -0.69
TNRC6B-205ENST00000446273 PTPN23Q9H3S7 1636 aa10.71□□□□□ -0.69
TNRC6B-205ENST00000446273 NAIPQ13075 1403 aa10.71□□□□□ -0.69
TNRC6B-205ENST00000446273 MYBBP1AQ9BQG0 1328 aaKnown RBP10.71□□□□□ -0.69
TNRC6B-205ENST00000446273 DAPK1P53355 1430 aa10.71□□□□□ -0.69
TNRC6B-205ENST00000446273 PRKRIP1Q9H875 184 aaPredicted RBP10.71□□□□□ -0.69
TNRC6B-205ENST00000446273 SALL2Q9Y467 1007 aaPredicted RBP10.71□□□□□ -0.69
TNRC6B-205ENST00000446273 ZBED9Q6R2W3 1325 aa10.71□□□□□ -0.7
TNRC6B-205ENST00000446273 MAPK8IP3Q9UPT6 1336 aa10.71□□□□□ -0.7
TNRC6B-205ENST00000446273 CCDC7Q96M83 1385 aa10.71□□□□□ -0.7
TNRC6B-205ENST00000446273 POGZQ7Z3K3 1410 aa10.71□□□□□ -0.7
TNRC6B-205ENST00000446273 KIAA1107Q9UPP5 1409 aa10.71□□□□□ -0.7
TNRC6B-205ENST00000446273 CFAP43Q8NDM7 1665 aa10.7□□□□□ -0.7
TNRC6B-205ENST00000446273 WDR97A6NE52 1622 aa10.7□□□□□ -0.7
TNRC6B-205ENST00000446273 MYH16Q9H6N6 1097 aa10.7□□□□□ -0.7
TNRC6B-205ENST00000446273 STK26Q9P289 416 aa10.7□□□□□ -0.7
TNRC6B-205ENST00000446273 SRPK2P78362 688 aaKnown RBP10.69□□□□□ -0.7
TNRC6B-205ENST00000446273 BECN1Q14457 450 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms