RNA–Protein interactions for RNA: ENST00000446273.1

TNRC6B-205, Transcript of trinucleotide repeat containing 6B, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TNRC6B, Length 4,741 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-205ENST00000446273 NISCHQ9Y2I1 1504 aa15.5■□□□□ 0.07
TNRC6B-205ENST00000446273 DCAF8L2P0C7V8 631 aa14.76□□□□□ -0.05
TNRC6B-205ENST00000446273 SHROOM4Q9ULL8 1493 aa13.68□□□□□ -0.22
TNRC6B-205ENST00000446273 SUPT5HO00267 1087 aaKnown RBP13.62□□□□□ -0.23
TNRC6B-205ENST00000446273 ABCC9O60706 1549 aa13.39□□□□□ -0.27
TNRC6B-205ENST00000446273 FAM9AQ8IZU1 332 aaPredicted RBP13.26□□□□□ -0.29
TNRC6B-205ENST00000446273 CCDC180Q9P1Z9 1646 aa13.17□□□□□ -0.3
TNRC6B-205ENST00000446273 PABPN1Q86U42 306 aaKnown RBP eCLIP13□□□□□ -0.33
TNRC6B-205ENST00000446273 ZCCHC6Q5VYS8 1495 aaKnown RBP12.98□□□□□ -0.33
TNRC6B-205ENST00000446273 APLP2Q06481 763 aa12.91□□□□□ -0.34
TNRC6B-205ENST00000446273 TRIM41Q8WV44 630 aa12.87□□□□□ -0.35
TNRC6B-205ENST00000446273 ZEB1P37275 1124 aaPredicted RBP12.82□□□□□ -0.36
TNRC6B-205ENST00000446273 EHMT2Q96KQ7 1210 aa12.78□□□□□ -0.36
TNRC6B-205ENST00000446273 CHIC1Q5VXU3 224 aa12.76□□□□□ -0.37
TNRC6B-205ENST00000446273 DCAF1Q9Y4B6 1507 aa12.71□□□□□ -0.38
TNRC6B-205ENST00000446273 PCGF6Q9BYE7 350 aa12.67□□□□□ -0.38
TNRC6B-205ENST00000446273 RB1CC1Q8TDY2 1594 aa12.66□□□□□ -0.38
TNRC6B-205ENST00000446273 SCRIBQ14160 1630 aa12.59□□□□□ -0.39
TNRC6B-205ENST00000446273 TRIM26Q12899 539 aaPredicted RBP12.57□□□□□ -0.4
TNRC6B-205ENST00000446273 NACADO15069 1562 aa12.56□□□□□ -0.4
TNRC6B-205ENST00000446273 RANGAP1P46060 587 aaPredicted RBP12.48□□□□□ -0.41
TNRC6B-205ENST00000446273 UBTFP17480 764 aaKnown RBP12.47□□□□□ -0.41
TNRC6B-205ENST00000446273 HRCP23327 699 aa12.45□□□□□ -0.42
TNRC6B-205ENST00000446273 PELP1Q8IZL8 1130 aaKnown RBP12.41□□□□□ -0.42
TNRC6B-205ENST00000446273 MYO15BQ96JP2 1530 aa12.41□□□□□ -0.42
TNRC6B-205ENST00000446273 ATP1B4Q9UN42 357 aaPredicted RBP12.4□□□□□ -0.42
TNRC6B-205ENST00000446273 CCER1Q8TC90 406 aaPredicted RBP12.38□□□□□ -0.43
TNRC6B-205ENST00000446273 LOC105371045A0A1W2PR82 267 aa12.32□□□□□ -0.44
TNRC6B-205ENST00000446273 CENPBP07199 599 aaPredicted RBP12.31□□□□□ -0.44
TNRC6B-205ENST00000446273 TTBK1Q5TCY1 1321 aaPredicted RBP12.24□□□□□ -0.45
TNRC6B-205ENST00000446273 RSF1Q96T23 1441 aaPredicted RBP12.23□□□□□ -0.45
TNRC6B-205ENST00000446273 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.18□□□□□ -0.46
TNRC6B-205ENST00000446273 HNRNPUL2Q1KMD3 747 aaKnown RBP12.18□□□□□ -0.46
TNRC6B-205ENST00000446273 FBLN2P98095 1184 aa12.18□□□□□ -0.46
TNRC6B-205ENST00000446273 BAZ1AQ9NRL2 1556 aaPredicted RBP12.15□□□□□ -0.46
TNRC6B-205ENST00000446273 EEA1Q15075 1411 aa12.15□□□□□ -0.46
TNRC6B-205ENST00000446273 CSRNP3Q8WYN3 585 aa12.12□□□□□ -0.47
TNRC6B-205ENST00000446273 BAZ1BQ9UIG0 1483 aaKnown RBP12.09□□□□□ -0.47
TNRC6B-205ENST00000446273 MYT1LQ9UL68 1186 aa12.08□□□□□ -0.48
TNRC6B-205ENST00000446273 CECR2Q9BXF3 1484 aa11.99□□□□□ -0.49
TNRC6B-205ENST00000446273 PPARGC1BQ86YN6 1023 aaKnown RBP11.99□□□□□ -0.49
TNRC6B-205ENST00000446273 ERCC6Q03468 1493 aa11.95□□□□□ -0.5
TNRC6B-205ENST00000446273 CDK11AQ9UQ88 783 aaPredicted RBP11.94□□□□□ -0.5
TNRC6B-205ENST00000446273 GOLGA3Q08378 1498 aa11.9□□□□□ -0.5
TNRC6B-205ENST00000446273 SMARCA2P51531 1590 aa11.9□□□□□ -0.51
TNRC6B-205ENST00000446273 NPM1P06748 294 aaKnown RBP eCLIP11.89□□□□□ -0.51
TNRC6B-205ENST00000446273 WRNQ14191 1432 aaPredicted RBP eCLIP11.88□□□□□ -0.51
TNRC6B-205ENST00000446273 MROH2BQ7Z745 1585 aa11.87□□□□□ -0.51
TNRC6B-205ENST00000446273 TNIKQ9UKE5 1360 aa11.87□□□□□ -0.51
TNRC6B-205ENST00000446273 CHMP7Q8WUX9 453 aaPredicted RBP11.87□□□□□ -0.51
TNRC6B-205ENST00000446273 TOP2AP11388 1531 aaKnown RBP11.86□□□□□ -0.51
TNRC6B-205ENST00000446273 NEFLP07196 543 aa11.85□□□□□ -0.51
TNRC6B-205ENST00000446273 CEP164Q9UPV0 1460 aa11.84□□□□□ -0.51
TNRC6B-205ENST00000446273 MYT1Q01538 1121 aa11.84□□□□□ -0.51
TNRC6B-205ENST00000446273 DIEXFQ68CQ4 756 aaKnown RBP11.83□□□□□ -0.52
TNRC6B-205ENST00000446273 ITGAEP38570 1179 aa11.82□□□□□ -0.52
TNRC6B-205ENST00000446273 P3H3Q8IVL6 736 aa11.81□□□□□ -0.52
TNRC6B-205ENST00000446273 PDS5BQ9NTI5 1447 aa11.8□□□□□ -0.52
TNRC6B-205ENST00000446273 CLIP1P30622 1438 aa11.79□□□□□ -0.52
TNRC6B-205ENST00000446273 CEP162Q5TB80 1403 aa11.78□□□□□ -0.52
TNRC6B-205ENST00000446273 ZNF316A6NFI3 1004 aaPredicted RBP11.77□□□□□ -0.53
TNRC6B-205ENST00000446273 ATAD2BQ9ULI0 1458 aa11.76□□□□□ -0.53
TNRC6B-205ENST00000446273 CCDC88BA6NC98 1476 aa11.75□□□□□ -0.53
TNRC6B-205ENST00000446273 KIF27Q86VH2 1401 aa11.75□□□□□ -0.53
TNRC6B-205ENST00000446273 SMARCA4P51532 1647 aa11.75□□□□□ -0.53
TNRC6B-205ENST00000446273 ACIN1Q9UKV3 1341 aaKnown RBP11.74□□□□□ -0.53
TNRC6B-205ENST00000446273 ARID3CA6NKF2 412 aa11.74□□□□□ -0.53
TNRC6B-205ENST00000446273 FAM50AQ14320 339 aaKnown RBP11.73□□□□□ -0.53
TNRC6B-205ENST00000446273 WIZO95785 1651 aa11.71□□□□□ -0.53
TNRC6B-205ENST00000446273 CADPSQ9ULU8 1353 aa11.71□□□□□ -0.54
TNRC6B-205ENST00000446273 YTHDC1Q96MU7 727 aaKnown RBP11.69□□□□□ -0.54
TNRC6B-205ENST00000446273 CLSPNQ9HAW4 1339 aa11.68□□□□□ -0.54
TNRC6B-205ENST00000446273 ESF1Q9H501 851 aaKnown RBP11.68□□□□□ -0.54
TNRC6B-205ENST00000446273 EIF4G1Q04637 1599 aaKnown RBP11.66□□□□□ -0.54
TNRC6B-205ENST00000446273 TRIM52Q96A61 297 aa11.61□□□□□ -0.55
TNRC6B-205ENST00000446273 NCAPD3P42695 1498 aa11.61□□□□□ -0.55
TNRC6B-205ENST00000446273 ZNF777Q9ULD5 760 aaPredicted RBP11.59□□□□□ -0.55
TNRC6B-205ENST00000446273 ERICH6Q7L0X2 663 aa11.59□□□□□ -0.55
TNRC6B-205ENST00000446273 FHAD1B1AJZ9 1412 aa11.58□□□□□ -0.56
TNRC6B-205ENST00000446273 VPS8Q8N3P4 1428 aa11.57□□□□□ -0.56
TNRC6B-205ENST00000446273 CUX2O14529 1486 aa11.56□□□□□ -0.56
TNRC6B-205ENST00000446273 SOGA1O94964 1423 aa11.56□□□□□ -0.56
TNRC6B-205ENST00000446273 ABCC8Q09428 1581 aa11.55□□□□□ -0.56
TNRC6B-205ENST00000446273 ANP32CO43423 234 aa11.54□□□□□ -0.56
TNRC6B-205ENST00000446273 FANCD2Q9BXW9 1451 aa11.52□□□□□ -0.57
TNRC6B-205ENST00000446273 TDRD9Q8NDG6 1382 aaKnown RBP11.52□□□□□ -0.57
TNRC6B-205ENST00000446273 MTUS2Q5JR59 1369 aa11.52□□□□□ -0.57
TNRC6B-205ENST00000446273 CC2D2AQ9P2K1 1620 aa11.51□□□□□ -0.57
TNRC6B-205ENST00000446273 TSPY4P0CV99 314 aa11.5□□□□□ -0.57
TNRC6B-205ENST00000446273 TSPY10P0CW01 314 aa11.5□□□□□ -0.57
TNRC6B-205ENST00000446273 NEUROD1Q13562 356 aa11.5□□□□□ -0.57
TNRC6B-205ENST00000446273 CARMIL1Q5VZK9 1371 aa11.5□□□□□ -0.57
TNRC6B-205ENST00000446273 PLEKHD1A6NEE1 506 aa11.5□□□□□ -0.57
TNRC6B-205ENST00000446273 TONSLQ96HA7 1378 aa11.49□□□□□ -0.57
TNRC6B-205ENST00000446273 DNAJC5BQ9UF47 199 aa11.48□□□□□ -0.57
TNRC6B-205ENST00000446273 KCNH8Q96L42 1107 aa11.48□□□□□ -0.57
TNRC6B-205ENST00000446273 BICRAQ9NZM4 1560 aa11.47□□□□□ -0.57
TNRC6B-205ENST00000446273 TIMELESSQ9UNS1 1208 aa11.46□□□□□ -0.58
TNRC6B-205ENST00000446273 POLR3GLQ9BT43 218 aa11.44□□□□□ -0.58
TNRC6B-205ENST00000446273 SLC4A1APQ9BWU0 796 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms