RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 TCOF1Q13428 1488 aaKnown RBP12.6□□□□□ -0.39
BRAFP1-201ENST00000445336 SIGLEC1Q9BZZ2 1709 aa12.6□□□□□ -0.39
BRAFP1-201ENST00000445336 IQGAP2Q13576 1575 aa12.6□□□□□ -0.39
BRAFP1-201ENST00000445336 UGGT2Q9NYU1 1516 aa12.6□□□□□ -0.39
BRAFP1-201ENST00000445336 TRAPPC8Q9Y2L5 1435 aa12.6□□□□□ -0.39
BRAFP1-201ENST00000445336 DENND4BO75064 1496 aaPredicted RBP12.59□□□□□ -0.39
BRAFP1-201ENST00000445336 CAMSAP1Q5T5Y3 1602 aa12.58□□□□□ -0.39
BRAFP1-201ENST00000445336 C3P01024 1663 aa12.58□□□□□ -0.4
BRAFP1-201ENST00000445336 RNF17Q9BXT8 1623 aaKnown RBP12.58□□□□□ -0.4
BRAFP1-201ENST00000445336 MROH2AA6NES4 1674 aa12.58□□□□□ -0.4
BRAFP1-201ENST00000445336 DISP1Q96F81 1524 aa12.58□□□□□ -0.4
BRAFP1-201ENST00000445336 SYNMO15061 1565 aa12.57□□□□□ -0.4
BRAFP1-201ENST00000445336 ABCA8O94911 1581 aa12.56□□□□□ -0.4
BRAFP1-201ENST00000445336 AGLP35573 1532 aa12.56□□□□□ -0.4
BRAFP1-201ENST00000445336 RAPGEF2Q9Y4G8 1499 aa12.55□□□□□ -0.4
BRAFP1-201ENST00000445336 C9orf84Q5VXU9 1444 aa12.55□□□□□ -0.4
BRAFP1-201ENST00000445336 POTEAQ6S8J7 498 aa12.54□□□□□ -0.4
BRAFP1-201ENST00000445336 CNTLNQ9NXG0 1405 aa12.53□□□□□ -0.4
BRAFP1-201ENST00000445336 ATP10AO60312 1499 aa12.51□□□□□ -0.41
BRAFP1-201ENST00000445336 RAPGEF3O95398 923 aa12.51□□□□□ -0.41
BRAFP1-201ENST00000445336 PCDH10Q9P2E7 1040 aa12.51□□□□□ -0.41
BRAFP1-201ENST00000445336 ZNF335Q9H4Z2 1342 aaPredicted RBP12.5□□□□□ -0.41
BRAFP1-201ENST00000445336 SHANK2Q9UPX8 1470 aa12.48□□□□□ -0.41
BRAFP1-201ENST00000445336 POLR1AO95602 1720 aaPredicted RBP12.46□□□□□ -0.42
BRAFP1-201ENST00000445336 RAPGEF6Q8TEU7 1601 aa12.45□□□□□ -0.42
BRAFP1-201ENST00000445336 LRRC7Q96NW7 1537 aa12.44□□□□□ -0.42
BRAFP1-201ENST00000445336 SUPT6HQ7KZ85 1726 aaKnown RBP12.44□□□□□ -0.42
BRAFP1-201ENST00000445336 CDK13Q14004 1512 aaKnown RBP12.44□□□□□ -0.42
BRAFP1-201ENST00000445336 NHSL1Q5SYE7 1610 aa12.42□□□□□ -0.42
BRAFP1-201ENST00000445336 VWDEQ8N2E2 1590 aa12.42□□□□□ -0.42
BRAFP1-201ENST00000445336 HECW1Q76N89 1606 aa12.42□□□□□ -0.42
BRAFP1-201ENST00000445336 ZRANB1Q9UGI0 708 aa12.4□□□□□ -0.42
BRAFP1-201ENST00000445336 FAM135BQ49AJ0 1406 aa12.39□□□□□ -0.43
BRAFP1-201ENST00000445336 MYO3AQ8NEV4 1616 aa12.39□□□□□ -0.43
BRAFP1-201ENST00000445336 PIP4K2BP78356 416 aa12.39□□□□□ -0.43
BRAFP1-201ENST00000445336 KDM5CP41229 1560 aa12.39□□□□□ -0.43
BRAFP1-201ENST00000445336 PPP6R1Q9UPN7 881 aa12.39□□□□□ -0.43
BRAFP1-201ENST00000445336 GOLGA3Q08378 1498 aa12.37□□□□□ -0.43
BRAFP1-201ENST00000445336 CEP170BQ9Y4F5 1589 aaPredicted RBP12.37□□□□□ -0.43
BRAFP1-201ENST00000445336 SLC34A2O95436 690 aa12.37□□□□□ -0.43
BRAFP1-201ENST00000445336 SCAF1Q9H7N4 1312 aaKnown RBP12.36□□□□□ -0.43
BRAFP1-201ENST00000445336 DEPDC5O75140 1603 aa12.36□□□□□ -0.43
BRAFP1-201ENST00000445336 RBM33Q96EV2 1170 aaKnown RBP12.36□□□□□ -0.43
BRAFP1-201ENST00000445336 ZNF772Q68DY9 489 aaPredicted RBP12.35□□□□□ -0.43
BRAFP1-201ENST00000445336 SETBP1Q9Y6X0 1596 aa12.33□□□□□ -0.44
BRAFP1-201ENST00000445336 LRRC9Q6ZRR7 1453 aa12.32□□□□□ -0.44
BRAFP1-201ENST00000445336 NEURL4Q96JN8 1562 aa12.32□□□□□ -0.44
BRAFP1-201ENST00000445336 MED14O60244 1454 aa12.32□□□□□ -0.44
BRAFP1-201ENST00000445336 IGF1RP08069 1367 aa12.3□□□□□ -0.44
BRAFP1-201ENST00000445336 KIF14Q15058 1648 aa12.29□□□□□ -0.44
BRAFP1-201ENST00000445336 CCDC125Q86Z20 511 aa12.28□□□□□ -0.44
BRAFP1-201ENST00000445336 NCKAP5LQ9HCH0 1330 aa12.28□□□□□ -0.44
BRAFP1-201ENST00000445336 KCNH8Q96L42 1107 aa12.28□□□□□ -0.44
BRAFP1-201ENST00000445336 A2ML1A8K2U0 1454 aa12.27□□□□□ -0.45
BRAFP1-201ENST00000445336 CEBPAP49715 358 aaPredicted RBP12.26□□□□□ -0.45
BRAFP1-201ENST00000445336 KDM5DQ9BY66 1539 aa12.25□□□□□ -0.45
BRAFP1-201ENST00000445336 FGD6Q6ZV73 1430 aa12.25□□□□□ -0.45
BRAFP1-201ENST00000445336 ATP10BO94823 1461 aa12.24□□□□□ -0.45
BRAFP1-201ENST00000445336 NWD1Q149M9 1564 aa12.23□□□□□ -0.45
BRAFP1-201ENST00000445336 DIP2CQ9Y2E4 1556 aa12.23□□□□□ -0.45
BRAFP1-201ENST00000445336 ATAD2Q6PL18 1390 aa12.23□□□□□ -0.45
BRAFP1-201ENST00000445336 PLPPR3Q6T4P5 718 aa12.22□□□□□ -0.45
BRAFP1-201ENST00000445336 KIF27Q86VH2 1401 aa12.22□□□□□ -0.45
BRAFP1-201ENST00000445336 DNMT1P26358 1616 aaKnown RBP12.22□□□□□ -0.45
BRAFP1-201ENST00000445336 JCADQ9P266 1359 aa12.22□□□□□ -0.45
BRAFP1-201ENST00000445336 SPATA31A6Q5VVP1 1343 aa12.21□□□□□ -0.45
BRAFP1-201ENST00000445336 SHPRHQ149N8 1683 aa12.21□□□□□ -0.45
BRAFP1-201ENST00000445336 FAM135AQ9P2D6 1515 aa12.19□□□□□ -0.46
BRAFP1-201ENST00000445336 RXRBP28702 533 aa12.18□□□□□ -0.46
BRAFP1-201ENST00000445336 CARMIL1Q5VZK9 1371 aa12.17□□□□□ -0.46
BRAFP1-201ENST00000445336 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.17□□□□□ -0.46
BRAFP1-201ENST00000445336 MLECQ14165 292 aa12.17□□□□□ -0.46
BRAFP1-201ENST00000445336 ZNF518AQ6AHZ1 1483 aa12.17□□□□□ -0.46
BRAFP1-201ENST00000445336 MLH3Q9UHC1 1453 aa12.17□□□□□ -0.46
BRAFP1-201ENST00000445336 IQGAP1P46940 1657 aa12.16□□□□□ -0.46
BRAFP1-201ENST00000445336 STRCP1A6NGW2 1772 aa12.16□□□□□ -0.46
BRAFP1-201ENST00000445336 FAM9AQ8IZU1 332 aaPredicted RBP12.16□□□□□ -0.46
BRAFP1-201ENST00000445336 CTTNBP2Q8WZ74 1663 aa12.15□□□□□ -0.46
BRAFP1-201ENST00000445336 XIRP1Q702N8 1843 aaKnown RBP12.14□□□□□ -0.47
BRAFP1-201ENST00000445336 YY1P25490 414 aa12.14□□□□□ -0.47
BRAFP1-201ENST00000445336 ESF1Q9H501 851 aaKnown RBP12.14□□□□□ -0.47
BRAFP1-201ENST00000445336 PHLPP1O60346 1717 aa12.13□□□□□ -0.47
BRAFP1-201ENST00000445336 ROBO1Q9Y6N7 1651 aa12.13□□□□□ -0.47
BRAFP1-201ENST00000445336 ABCC3O15438 1527 aa12.11□□□□□ -0.47
BRAFP1-201ENST00000445336 NPHP4O75161 1426 aaPredicted RBP12.1□□□□□ -0.47
BRAFP1-201ENST00000445336 ABCA6Q8N139 1617 aa12.1□□□□□ -0.47
BRAFP1-201ENST00000445336 RGS12O14924 1447 aa12.09□□□□□ -0.47
BRAFP1-201ENST00000445336 SCAPERQ9BY12 1400 aa12.09□□□□□ -0.47
BRAFP1-201ENST00000445336 COL16A1Q07092 1604 aaPredicted RBP12.09□□□□□ -0.47
BRAFP1-201ENST00000445336 ATP7AQ04656 1500 aa12.08□□□□□ -0.48
BRAFP1-201ENST00000445336 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.08□□□□□ -0.48
BRAFP1-201ENST00000445336 ZMYM3Q14202 1370 aa12.07□□□□□ -0.48
BRAFP1-201ENST00000445336 TTBK1Q5TCY1 1321 aaPredicted RBP12.07□□□□□ -0.48
BRAFP1-201ENST00000445336 PLCH2O75038 1416 aa12.07□□□□□ -0.48
BRAFP1-201ENST00000445336 ZC3H13Q5T200 1668 aaKnown RBP12.07□□□□□ -0.48
BRAFP1-201ENST00000445336 SENP3-EIF4A1A0A087X0R7 540 aa12.05□□□□□ -0.48
BRAFP1-201ENST00000445336 LRP6O75581 1613 aa12.05□□□□□ -0.48
BRAFP1-201ENST00000445336 TRIM52Q96A61 297 aa12.04□□□□□ -0.48
BRAFP1-201ENST00000445336 AHDC1Q5TGY3 1603 aaPredicted RBP12.04□□□□□ -0.48
BRAFP1-201ENST00000445336 UNC13BO14795 1591 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms