RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 NISCHQ9Y2I1 1504 aa18.14■□□□□ 0.49
BRAFP1-201ENST00000445336 DNAJC5Q9H3Z4 198 aa18.07■□□□□ 0.48
BRAFP1-201ENST00000445336 DNAJC5BQ9UF47 199 aa18.04■□□□□ 0.48
BRAFP1-201ENST00000445336 ABCC9O60706 1549 aa17.99■□□□□ 0.47
BRAFP1-201ENST00000445336 CCDC180Q9P1Z9 1646 aa17.37■□□□□ 0.37
BRAFP1-201ENST00000445336 RB1CC1Q8TDY2 1594 aa17.03■□□□□ 0.32
BRAFP1-201ENST00000445336 CUX2O14529 1486 aa16.76■□□□□ 0.27
BRAFP1-201ENST00000445336 SHROOM4Q9ULL8 1493 aa16.71■□□□□ 0.27
BRAFP1-201ENST00000445336 NACADO15069 1562 aa16.65■□□□□ 0.26
BRAFP1-201ENST00000445336 CECR2Q9BXF3 1484 aa16.59■□□□□ 0.25
BRAFP1-201ENST00000445336 UNC13AQ9UPW8 1703 aa16.5■□□□□ 0.23
BRAFP1-201ENST00000445336 CC2D2AQ9P2K1 1620 aa16.47■□□□□ 0.23
BRAFP1-201ENST00000445336 BICRAQ9NZM4 1560 aa16.43■□□□□ 0.22
BRAFP1-201ENST00000445336 PABPN1Q86U42 306 aaKnown RBP eCLIP16.22■□□□□ 0.19
BRAFP1-201ENST00000445336 MYO15BQ96JP2 1530 aa16.21■□□□□ 0.19
BRAFP1-201ENST00000445336 EIF4G1Q04637 1599 aaKnown RBP16.13■□□□□ 0.17
BRAFP1-201ENST00000445336 TRIM41Q8WV44 630 aa16.1■□□□□ 0.17
BRAFP1-201ENST00000445336 AEBP2Q6ZN18 517 aaPredicted RBP15.82■□□□□ 0.12
BRAFP1-201ENST00000445336 ERCC6Q03468 1493 aa15.78■□□□□ 0.12
BRAFP1-201ENST00000445336 THOC2Q8NI27 1593 aaKnown RBP15.62■□□□□ 0.09
BRAFP1-201ENST00000445336 ILDR1Q86SU0 546 aaPredicted RBP15.43■□□□□ 0.06
BRAFP1-201ENST00000445336 BAZ1AQ9NRL2 1556 aaPredicted RBP15.43■□□□□ 0.06
BRAFP1-201ENST00000445336 RIMBP3CA6NJZ7 1639 aa15.39■□□□□ 0.05
BRAFP1-201ENST00000445336 RIMBP3BA6NNM3 1639 aa15.39■□□□□ 0.05
BRAFP1-201ENST00000445336 RIMBP3Q9UFD9 1639 aa15.39■□□□□ 0.05
BRAFP1-201ENST00000445336 DCAF1Q9Y4B6 1507 aa15.34■□□□□ 0.05
BRAFP1-201ENST00000445336 OSCARQ8IYS5 282 aa15.29■□□□□ 0.04
BRAFP1-201ENST00000445336 NCAPD3P42695 1498 aa15.27■□□□□ 0.03
BRAFP1-201ENST00000445336 LAMC3Q9Y6N6 1575 aa15.23■□□□□ 0.03
BRAFP1-201ENST00000445336 SCRIBQ14160 1630 aa15.18■□□□□ 0.02
BRAFP1-201ENST00000445336 ARHGEF11O15085 1522 aa15.15■□□□□ 0.02
BRAFP1-201ENST00000445336 HMGXB3Q12766 1538 aa15.14■□□□□ 0.01
BRAFP1-201ENST00000445336 WDR62O43379 1518 aa15.12■□□□□ 0.01
BRAFP1-201ENST00000445336 PDS5BQ9NTI5 1447 aa15.04■□□□□ -0
BRAFP1-201ENST00000445336 KIF21AQ7Z4S6 1674 aa15.04■□□□□ -0
BRAFP1-201ENST00000445336 MRC2Q9UBG0 1479 aa15.01□□□□□ -0.01
BRAFP1-201ENST00000445336 DCAF8L2P0C7V8 631 aa15□□□□□ -0.01
BRAFP1-201ENST00000445336 NESP48681 1621 aa14.99□□□□□ -0.01
BRAFP1-201ENST00000445336 ERCC6L2Q5T890 1561 aa14.98□□□□□ -0.01
BRAFP1-201ENST00000445336 SMARCA2P51531 1590 aa14.98□□□□□ -0.01
BRAFP1-201ENST00000445336 TRHP20396 242 aaPredicted RBP14.97□□□□□ -0.01
BRAFP1-201ENST00000445336 RSF1Q96T23 1441 aaPredicted RBP14.88□□□□□ -0.03
BRAFP1-201ENST00000445336 ARAP1Q96P48 1450 aa14.86□□□□□ -0.03
BRAFP1-201ENST00000445336 ATAD2BQ9ULI0 1458 aa14.83□□□□□ -0.04
BRAFP1-201ENST00000445336 ZCCHC6Q5VYS8 1495 aaKnown RBP14.77□□□□□ -0.04
BRAFP1-201ENST00000445336 SOCS7O14512 581 aa14.77□□□□□ -0.05
BRAFP1-201ENST00000445336 FBXO41Q8TF61 875 aa14.77□□□□□ -0.05
BRAFP1-201ENST00000445336 LMTK3Q96Q04 1460 aa14.71□□□□□ -0.06
BRAFP1-201ENST00000445336 CYB5RLQ6IPT4 315 aa14.69□□□□□ -0.06
BRAFP1-201ENST00000445336 PEG3Q9GZU2 1588 aa14.66□□□□□ -0.06
BRAFP1-201ENST00000445336 CEP164Q9UPV0 1460 aa14.56□□□□□ -0.08
BRAFP1-201ENST00000445336 BAZ1BQ9UIG0 1483 aaKnown RBP14.56□□□□□ -0.08
BRAFP1-201ENST00000445336 CADPSQ9ULU8 1353 aa14.55□□□□□ -0.08
BRAFP1-201ENST00000445336 SMARCA4P51532 1647 aa14.5□□□□□ -0.09
BRAFP1-201ENST00000445336 HECW2Q9P2P5 1572 aa14.46□□□□□ -0.09
BRAFP1-201ENST00000445336 IFT140Q96RY7 1462 aa14.45□□□□□ -0.1
BRAFP1-201ENST00000445336 CHD1O14646 1710 aa14.45□□□□□ -0.1
BRAFP1-201ENST00000445336 KDM4FA0A1W2PPD8 638 aa14.44□□□□□ -0.1
BRAFP1-201ENST00000445336 CLASP1Q7Z460 1538 aa14.43□□□□□ -0.1
BRAFP1-201ENST00000445336 KIF13AQ9H1H9 1805 aa14.36□□□□□ -0.11
BRAFP1-201ENST00000445336 FANCD2Q9BXW9 1451 aa14.33□□□□□ -0.12
BRAFP1-201ENST00000445336 WDR97A6NE52 1622 aa14.29□□□□□ -0.12
BRAFP1-201ENST00000445336 URB2Q14146 1524 aaKnown RBP14.29□□□□□ -0.12
BRAFP1-201ENST00000445336 EIF4G3O43432 1585 aaKnown RBP14.28□□□□□ -0.12
BRAFP1-201ENST00000445336 SYNJ1O43426 1573 aa14.26□□□□□ -0.13
BRAFP1-201ENST00000445336 ILDR2Q71H61 639 aa14.21□□□□□ -0.13
BRAFP1-201ENST00000445336 SPATA31D1Q6ZQQ2 1576 aa14.2□□□□□ -0.14
BRAFP1-201ENST00000445336 KDM6BO15054 1643 aa14.2□□□□□ -0.14
BRAFP1-201ENST00000445336 PRDM2Q13029 1718 aa14.19□□□□□ -0.14
BRAFP1-201ENST00000445336 SYNJ2O15056 1496 aa14.19□□□□□ -0.14
BRAFP1-201ENST00000445336 ZNF608Q9ULD9 1512 aaPredicted RBP14.17□□□□□ -0.14
BRAFP1-201ENST00000445336 GAPVD1Q14C86 1478 aa14.16□□□□□ -0.14
BRAFP1-201ENST00000445336 CFTRP13569 1480 aa14.15□□□□□ -0.14
BRAFP1-201ENST00000445336 ABCC8Q09428 1581 aa14.15□□□□□ -0.14
BRAFP1-201ENST00000445336 ADGRL1O94910 1474 aa14.15□□□□□ -0.14
BRAFP1-201ENST00000445336 DISP3Q9P2K9 1392 aa14.14□□□□□ -0.15
BRAFP1-201ENST00000445336 TOP2BQ02880 1626 aa14.1□□□□□ -0.15
BRAFP1-201ENST00000445336 ABCC10Q5T3U5 1492 aa14.07□□□□□ -0.16
BRAFP1-201ENST00000445336 MAPKBP1O60336 1514 aa14.04□□□□□ -0.16
BRAFP1-201ENST00000445336 TARBP1Q13395 1621 aaKnown RBP14.03□□□□□ -0.16
BRAFP1-201ENST00000445336 MAGI1Q96QZ7 1491 aaPredicted RBP14□□□□□ -0.17
BRAFP1-201ENST00000445336 DIP2BQ9P265 1576 aa13.99□□□□□ -0.17
BRAFP1-201ENST00000445336 TOPBP1Q92547 1522 aa13.93□□□□□ -0.18
BRAFP1-201ENST00000445336 DNMBPQ6XZF7 1577 aa13.9□□□□□ -0.18
BRAFP1-201ENST00000445336 MROH2BQ7Z745 1585 aa13.88□□□□□ -0.19
BRAFP1-201ENST00000445336 SHROOM2Q13796 1616 aa13.87□□□□□ -0.19
BRAFP1-201ENST00000445336 AQRO60306 1485 aaKnown RBP eCLIP13.8□□□□□ -0.2
BRAFP1-201ENST00000445336 SNAPC4Q5SXM2 1469 aa13.8□□□□□ -0.2
BRAFP1-201ENST00000445336 GLI2P10070 1586 aa13.78□□□□□ -0.2
BRAFP1-201ENST00000445336 IQSEC2Q5JU85 1478 aa13.77□□□□□ -0.21
BRAFP1-201ENST00000445336 CERKQ8TCT0 537 aa13.76□□□□□ -0.21
BRAFP1-201ENST00000445336 CEP170Q5SW79 1584 aa13.74□□□□□ -0.21
BRAFP1-201ENST00000445336 GRIN2BQ13224 1484 aa13.73□□□□□ -0.21
BRAFP1-201ENST00000445336 FAM69CQ0P6D2 419 aa13.73□□□□□ -0.21
BRAFP1-201ENST00000445336 PCF11O94913 1555 aaKnown RBP13.71□□□□□ -0.21
BRAFP1-201ENST00000445336 FBLN2P98095 1184 aa13.7□□□□□ -0.22
BRAFP1-201ENST00000445336 PPRC1Q5VV67 1664 aaKnown RBP13.7□□□□□ -0.22
BRAFP1-201ENST00000445336 CHMP7Q8WUX9 453 aaPredicted RBP13.68□□□□□ -0.22
BRAFP1-201ENST00000445336 NUP160Q12769 1436 aa13.63□□□□□ -0.23
BRAFP1-201ENST00000445336 POLA1P09884 1462 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms