RNA–Protein interactions for RNA: ENST00000443908.5

SF1-210, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-210ENST00000443908 PTPRMP28827 1452 aa20.71■□□□□ 0.91
SF1-210ENST00000443908 NCOA2Q15596 1464 aa20.69■□□□□ 0.9
SF1-210ENST00000443908 AKNAQ7Z591 1439 aa20.68■□□□□ 0.9
SF1-210ENST00000443908 DENND4BO75064 1496 aaPredicted RBP20.68■□□□□ 0.9
SF1-210ENST00000443908 KIF14Q15058 1648 aa20.66■□□□□ 0.9
SF1-210ENST00000443908 MLECQ14165 292 aa20.65■□□□□ 0.9
SF1-210ENST00000443908 TRIM26Q12899 539 aaPredicted RBP20.64■□□□□ 0.89
SF1-210ENST00000443908 FBXO41Q8TF61 875 aa20.64■□□□□ 0.89
SF1-210ENST00000443908 FANCAO15360 1455 aa20.63■□□□□ 0.89
SF1-210ENST00000443908 RRBP1Q9P2E9 1410 aaKnown RBP20.62■□□□□ 0.89
SF1-210ENST00000443908 ADAMTSL3P82987 1691 aa20.62■□□□□ 0.89
SF1-210ENST00000443908 MYOM3Q5VTT5 1437 aa20.61■□□□□ 0.89
SF1-210ENST00000443908 MYT1LQ9UL68 1186 aa20.58■□□□□ 0.89
SF1-210ENST00000443908 POGZQ7Z3K3 1410 aa20.58■□□□□ 0.88
SF1-210ENST00000443908 FRMPD1Q5SYB0 1578 aa20.58■□□□□ 0.88
SF1-210ENST00000443908 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.58■□□□□ 0.882e-6■□□□□ 11.2
SF1-210ENST00000443908 HSPA2P54652 639 aa20.57■□□□□ 0.88
SF1-210ENST00000443908 BCORL1Q5H9F3 1711 aa20.57■□□□□ 0.88
SF1-210ENST00000443908 EFCAB2Q5VUJ9 269 aa20.57■□□□□ 0.88
SF1-210ENST00000443908 MIA2Q96PC5 1412 aa20.56■□□□□ 0.88
SF1-210ENST00000443908 ITSN2Q9NZM3 1697 aa20.56■□□□□ 0.88
SF1-210ENST00000443908 FGD6Q6ZV73 1430 aa20.55■□□□□ 0.88
SF1-210ENST00000443908 SCAPERQ9BY12 1400 aa20.55■□□□□ 0.88
SF1-210ENST00000443908 MADDQ8WXG6 1647 aa20.55■□□□□ 0.88
SF1-210ENST00000443908 CCNB3Q8WWL7 1395 aa20.54■□□□□ 0.88
SF1-210ENST00000443908 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.54■□□□□ 0.88
SF1-210ENST00000443908 PLCH2O75038 1416 aa20.53■□□□□ 0.88
SF1-210ENST00000443908 YEATS2Q9ULM3 1422 aa20.53■□□□□ 0.88
SF1-210ENST00000443908 GPATCH8Q9UKJ3 1502 aaKnown RBP20.52■□□□□ 0.87
SF1-210ENST00000443908 TTC37Q6PGP7 1564 aa20.51■□□□□ 0.87
SF1-210ENST00000443908 CFAP74Q9C0B2 1584 aa20.51■□□□□ 0.87
SF1-210ENST00000443908 TCOF1Q13428 1488 aaKnown RBP20.5■□□□□ 0.87
SF1-210ENST00000443908 ARHGEF40Q8TER5 1519 aa20.49■□□□□ 0.87
SF1-210ENST00000443908 CDC42BPAQ5VT25 1732 aa20.49■□□□□ 0.87
SF1-210ENST00000443908 RICTORQ6R327 1708 aa20.49■□□□□ 0.87
SF1-210ENST00000443908 PREX2Q70Z35 1606 aa20.49■□□□□ 0.87
SF1-210ENST00000443908 RIMS1Q86UR5 1692 aaKnown RBP20.48■□□□□ 0.87
SF1-210ENST00000443908 ZFYVE16Q7Z3T8 1539 aa20.48■□□□□ 0.87
SF1-210ENST00000443908 MAGI2Q86UL8 1455 aa20.48■□□□□ 0.87
SF1-210ENST00000443908 LMTK3Q96Q04 1460 aa20.48■□□□□ 0.87
SF1-210ENST00000443908 PTPN23Q9H3S7 1636 aa20.47■□□□□ 0.87
SF1-210ENST00000443908 AFAP1Q8N556 730 aa20.46■□□□□ 0.87
SF1-210ENST00000443908 MYO5CQ9NQX4 1742 aa20.46■□□□□ 0.87
SF1-210ENST00000443908 CEBPAP49715 358 aaPredicted RBP20.45■□□□□ 0.86
SF1-210ENST00000443908 ATP10AO60312 1499 aa20.43■□□□□ 0.86
SF1-210ENST00000443908 ZMYM4Q5VZL5 1548 aa20.42■□□□□ 0.86
SF1-210ENST00000443908 PCGF6Q9BYE7 350 aa20.41■□□□□ 0.86
SF1-210ENST00000443908 CDC42BPBQ9Y5S2 1711 aa20.41■□□□□ 0.86
SF1-210ENST00000443908 CFDP1Q9UEE9 299 aaPredicted RBP20.4■□□□□ 0.86
SF1-210ENST00000443908 ESF1Q9H501 851 aaKnown RBP20.39■□□□□ 0.85
SF1-210ENST00000443908 CAMSAP2Q08AD1 1489 aa20.38■□□□□ 0.85
SF1-210ENST00000443908 ARHGAP5Q13017 1502 aa20.37■□□□□ 0.85
SF1-210ENST00000443908 C9orf84Q5VXU9 1444 aa20.37■□□□□ 0.85
SF1-210ENST00000443908 CERKQ8TCT0 537 aa20.37■□□□□ 0.85
SF1-210ENST00000443908 SAMD9LQ8IVG5 1584 aa20.35■□□□□ 0.85
SF1-210ENST00000443908 FAM50AQ14320 339 aaKnown RBP20.35■□□□□ 0.85
SF1-210ENST00000443908 PLEKHH2Q8IVE3 1493 aa20.35■□□□□ 0.85
SF1-210ENST00000443908 SIGLEC1Q9BZZ2 1709 aa20.33■□□□□ 0.85
SF1-210ENST00000443908 ZNF518AQ6AHZ1 1483 aa20.33■□□□□ 0.85
SF1-210ENST00000443908 DNMT1P26358 1616 aaKnown RBP20.33■□□□□ 0.84
SF1-210ENST00000443908 ZNF777Q9ULD5 760 aaPredicted RBP20.32■□□□□ 0.84
SF1-210ENST00000443908 DMRT2Q9Y5R5 561 aa20.32■□□□□ 0.84
SF1-210ENST00000443908 ARHGEF5Q12774 1597 aa20.31■□□□□ 0.84
SF1-210ENST00000443908 KIAA1107Q9UPP5 1409 aa20.31■□□□□ 0.84
SF1-210ENST00000443908 FER1L4A9Z1Z3 1794 aa20.3■□□□□ 0.84
SF1-210ENST00000443908 ABCC1P33527 1531 aa20.29■□□□□ 0.84
SF1-210ENST00000443908 ZNF644Q9H582 1327 aaPredicted RBP20.28■□□□□ 0.84
SF1-210ENST00000443908 DAPK1P53355 1430 aa20.27■□□□□ 0.84
SF1-210ENST00000443908 ARHGEF12Q9NZN5 1544 aa20.27■□□□□ 0.84
SF1-210ENST00000443908 MBD5Q9P267 1494 aa20.27■□□□□ 0.84
SF1-210ENST00000443908 CROCC2H7BZ55 1655 aa20.26■□□□□ 0.83
SF1-210ENST00000443908 SHANK2Q9UPX8 1470 aa20.26■□□□□ 0.83
SF1-210ENST00000443908 ABCC5O15440 1437 aa20.26■□□□□ 0.83
SF1-210ENST00000443908 SYCP2Q9BX26 1530 aa20.25■□□□□ 0.83
SF1-210ENST00000443908 RSPH4AQ5TD94 716 aa20.24■□□□□ 0.83
SF1-210ENST00000443908 PTPRKQ15262 1439 aa20.24■□□□□ 0.83
SF1-210ENST00000443908 CCDC141Q6ZP82 1450 aa20.24■□□□□ 0.83
SF1-210ENST00000443908 UHRF1BP1Q6BDS2 1440 aa20.23■□□□□ 0.83
SF1-210ENST00000443908 TRAPPC8Q9Y2L5 1435 aa20.23■□□□□ 0.83
SF1-210ENST00000443908 HNRNPMP52272 730 aaKnown RBP eCLIP20.21■□□□□ 0.83
SF1-210ENST00000443908 MAST1Q9Y2H9 1570 aa20.21■□□□□ 0.83
SF1-210ENST00000443908 ROCK1Q13464 1354 aa20.21■□□□□ 0.83
SF1-210ENST00000443908 ADGRL2O95490 1459 aa20.2■□□□□ 0.82
SF1-210ENST00000443908 MLH3Q9UHC1 1453 aa20.2■□□□□ 0.82
SF1-210ENST00000443908 ITGAEP38570 1179 aa20.19■□□□□ 0.82
SF1-210ENST00000443908 KDM5CP41229 1560 aa20.19■□□□□ 0.82
SF1-210ENST00000443908 ADGBQ8N7X0 1667 aa20.18■□□□□ 0.82
SF1-210ENST00000443908 HFM1A2PYH4 1435 aa20.18■□□□□ 0.82
SF1-210ENST00000443908 SPAG9O60271 1321 aaKnown RBP20.17■□□□□ 0.82
SF1-210ENST00000443908 SETD1BQ9UPS6 1966 aaKnown RBP20.17■□□□□ 0.82
SF1-210ENST00000443908 DIP2CQ9Y2E4 1556 aa20.17■□□□□ 0.82
SF1-210ENST00000443908 PREX1Q8TCU6 1659 aa20.16■□□□□ 0.82
SF1-210ENST00000443908 GCC2Q8IWJ2 1684 aa20.14■□□□□ 0.81
SF1-210ENST00000443908 NAIPQ13075 1403 aa20.12■□□□□ 0.81
SF1-210ENST00000443908 SETD5Q9C0A6 1442 aa20.12■□□□□ 0.81
SF1-210ENST00000443908 TSPY4P0CV99 314 aa20.12■□□□□ 0.81
SF1-210ENST00000443908 TSPY10P0CW01 314 aa20.12■□□□□ 0.81
SF1-210ENST00000443908 NCOA1Q15788 1441 aa20.11■□□□□ 0.81
SF1-210ENST00000443908 GGT6Q6P531 493 aa20.11■□□□□ 0.81
SF1-210ENST00000443908 ABCA6Q8N139 1617 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms