RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 POGZQ7Z3K3 1410 aa33.68■■■□□ 2.98
CDKN3-204ENST00000442975 ARHGEF40Q8TER5 1519 aa33.66■■■□□ 2.98
CDKN3-204ENST00000442975 MTUS2Q5JR59 1369 aa33.63■■■□□ 2.97
CDKN3-204ENST00000442975 ZMYM4Q5VZL5 1548 aa33.63■■■□□ 2.97
CDKN3-204ENST00000442975 PREX2Q70Z35 1606 aa33.61■■■□□ 2.97
CDKN3-204ENST00000442975 ZFYVE16Q7Z3T8 1539 aa33.59■■■□□ 2.97
CDKN3-204ENST00000442975 ARID4BQ4LE39 1312 aaPredicted RBP33.58■■■□□ 2.97
CDKN3-204ENST00000442975 YEATS2Q9ULM3 1422 aa33.56■■■□□ 2.96
CDKN3-204ENST00000442975 MAGI2Q86UL8 1455 aa33.54■■■□□ 2.96
CDKN3-204ENST00000442975 VPS8Q8N3P4 1428 aa33.53■■■□□ 2.96
CDKN3-204ENST00000442975 ZNF518AQ6AHZ1 1483 aa33.53■■■□□ 2.96
CDKN3-204ENST00000442975 CDC42BPBQ9Y5S2 1711 aa33.53■■■□□ 2.96
CDKN3-204ENST00000442975 EHBP1L1Q8N3D4 1523 aa33.52■■■□□ 2.96
CDKN3-204ENST00000442975 CCNB3Q8WWL7 1395 aa33.49■■■□□ 2.95
CDKN3-204ENST00000442975 ABCC1P33527 1531 aa33.49■■■□□ 2.95
CDKN3-204ENST00000442975 GPATCH8Q9UKJ3 1502 aaKnown RBP33.48■■■□□ 2.95
CDKN3-204ENST00000442975 CDC42BPAQ5VT25 1732 aa33.48■■■□□ 2.95
CDKN3-204ENST00000442975 ZNF777Q9ULD5 760 aaPredicted RBP33.48■■■□□ 2.95
CDKN3-204ENST00000442975 AFAP1Q8N556 730 aa33.47■■■□□ 2.95
CDKN3-204ENST00000442975 MYT1LQ9UL68 1186 aa33.45■■■□□ 2.95
CDKN3-204ENST00000442975 KDM5CP41229 1560 aa33.43■■■□□ 2.94
CDKN3-204ENST00000442975 ARHGEF12Q9NZN5 1544 aa33.43■■■□□ 2.94
CDKN3-204ENST00000442975 CFDP1Q9UEE9 299 aaPredicted RBP33.42■■■□□ 2.94
CDKN3-204ENST00000442975 TRAPPC8Q9Y2L5 1435 aa33.42■■■□□ 2.94
CDKN3-204ENST00000442975 TIAM1Q13009 1591 aa33.4■■■□□ 2.94
CDKN3-204ENST00000442975 SAMD9LQ8IVG5 1584 aa33.38■■■□□ 2.93
CDKN3-204ENST00000442975 HECW2Q9P2P5 1572 aa33.38■■■□□ 2.93
CDKN3-204ENST00000442975 BCORL1Q5H9F3 1711 aa33.38■■■□□ 2.93
CDKN3-204ENST00000442975 ITSN2Q9NZM3 1697 aa33.38■■■□□ 2.93
CDKN3-204ENST00000442975 C9orf84Q5VXU9 1444 aa33.37■■■□□ 2.93
CDKN3-204ENST00000442975 SYCP2Q9BX26 1530 aa33.37■■■□□ 2.93
CDKN3-204ENST00000442975 ATP10AO60312 1499 aa33.37■■■□□ 2.93
CDKN3-204ENST00000442975 ADAMTSL3P82987 1691 aa33.36■■■□□ 2.93
CDKN3-204ENST00000442975 MADDQ8WXG6 1647 aa33.33■■■□□ 2.93
CDKN3-204ENST00000442975 MLECQ14165 292 aa33.32■■■□□ 2.92
CDKN3-204ENST00000442975 SIGLEC1Q9BZZ2 1709 aa33.32■■■□□ 2.92
CDKN3-204ENST00000442975 PTPRMP28827 1452 aa33.31■■■□□ 2.92
CDKN3-204ENST00000442975 NCOA2Q15596 1464 aa33.31■■■□□ 2.92
CDKN3-204ENST00000442975 PLEKHH2Q8IVE3 1493 aa33.31■■■□□ 2.92
CDKN3-204ENST00000442975 MLH3Q9UHC1 1453 aa33.31■■■□□ 2.92
CDKN3-204ENST00000442975 HNRNPMP52272 730 aaKnown RBP eCLIP33.29■■■□□ 2.92
CDKN3-204ENST00000442975 DIP2CQ9Y2E4 1556 aa33.29■■■□□ 2.92
CDKN3-204ENST00000442975 SUPT6HQ7KZ85 1726 aaKnown RBP33.28■■■□□ 2.92
CDKN3-204ENST00000442975 LRRC9Q6ZRR7 1453 aa33.27■■■□□ 2.92
CDKN3-204ENST00000442975 ABCA6Q8N139 1617 aa33.26■■■□□ 2.91
CDKN3-204ENST00000442975 KIAA1107Q9UPP5 1409 aa33.26■■■□□ 2.91
CDKN3-204ENST00000442975 ZNF644Q9H582 1327 aaPredicted RBP33.24■■■□□ 2.91
CDKN3-204ENST00000442975 SPAG9O60271 1321 aaKnown RBP33.22■■■□□ 2.91
CDKN3-204ENST00000442975 RIMS1Q86UR5 1692 aaKnown RBP33.2■■■□□ 2.91
CDKN3-204ENST00000442975 MAP3K1Q13233 1512 aa33.2■■■□□ 2.91
CDKN3-204ENST00000442975 KANK4Q5T7N3 995 aaPredicted RBP33.18■■■□□ 2.9
CDKN3-204ENST00000442975 PLPPR3Q6T4P5 718 aa33.18■■■□□ 2.9
CDKN3-204ENST00000442975 REREQ9P2R6 1566 aa33.17■■■□□ 2.9
CDKN3-204ENST00000442975 APLP2Q06481 763 aa33.16■■■□□ 2.9
CDKN3-204ENST00000442975 KIDINS220Q9ULH0 1771 aa33.16■■■□□ 2.9
CDKN3-204ENST00000442975 ATP7AQ04656 1500 aa33.13■■■□□ 2.89
CDKN3-204ENST00000442975 CAMSAP2Q08AD1 1489 aa33.12■■■□□ 2.89
CDKN3-204ENST00000442975 MBD5Q9P267 1494 aa33.11■■■□□ 2.89
CDKN3-204ENST00000442975 INO80Q9ULG1 1556 aaPredicted RBP33.1■■■□□ 2.89
CDKN3-204ENST00000442975 FER1L4A9Z1Z3 1794 aa33.09■■■□□ 2.89
CDKN3-204ENST00000442975 AGLP35573 1532 aa33.07■■■□□ 2.88
CDKN3-204ENST00000442975 CCDC141Q6ZP82 1450 aa33.04■■■□□ 2.88
CDKN3-204ENST00000442975 MYOM3Q5VTT5 1437 aa33.01■■■□□ 2.87
CDKN3-204ENST00000442975 A2MP01023 1474 aa32.99■■■□□ 2.87
CDKN3-204ENST00000442975 ESF1Q9H501 851 aaKnown RBP32.97■■■□□ 2.87
CDKN3-204ENST00000442975 PLXNC1O60486 1568 aa32.96■■■□□ 2.87
CDKN3-204ENST00000442975 RTEL1-TNFRSF6BF6WH68 1400 aa32.94■■■□□ 2.86
CDKN3-204ENST00000442975 CEBPAP49715 358 aaPredicted RBP32.93■■■□□ 2.86
CDKN3-204ENST00000442975 MIA2Q96PC5 1412 aa32.93■■■□□ 2.86
CDKN3-204ENST00000442975 RSPH4AQ5TD94 716 aa32.92■■■□□ 2.86
CDKN3-204ENST00000442975 LMTK3Q96Q04 1460 aa32.92■■■□□ 2.86
CDKN3-204ENST00000442975 ARHGEF5Q12774 1597 aa32.92■■■□□ 2.86
CDKN3-204ENST00000442975 ADGBQ8N7X0 1667 aa32.88■■■□□ 2.85
CDKN3-204ENST00000442975 TSPY4P0CV99 314 aa32.86■■■□□ 2.85
CDKN3-204ENST00000442975 TSPY10P0CW01 314 aa32.86■■■□□ 2.85
CDKN3-204ENST00000442975 CNTLNQ9NXG0 1405 aa32.85■■■□□ 2.85
CDKN3-204ENST00000442975 GGT6Q6P531 493 aa32.83■■■□□ 2.85
CDKN3-204ENST00000442975 DHX29Q7Z478 1369 aaKnown RBP32.82■■■□□ 2.84
CDKN3-204ENST00000442975 HSPA2P54652 639 aa32.79■■■□□ 2.84
CDKN3-204ENST00000442975 FGD6Q6ZV73 1430 aa32.78■■■□□ 2.84
CDKN3-204ENST00000442975 PTPN23Q9H3S7 1636 aa32.77■■■□□ 2.84
CDKN3-204ENST00000442975 C3P01024 1663 aa32.75■■■□□ 2.83
CDKN3-204ENST00000442975 MAST1Q9Y2H9 1570 aa32.74■■■□□ 2.83
CDKN3-204ENST00000442975 KIF3BO15066 747 aa32.73■■■□□ 2.83
CDKN3-204ENST00000442975 UHRF1BP1Q6BDS2 1440 aa32.72■■■□□ 2.83
CDKN3-204ENST00000442975 PREX1Q8TCU6 1659 aa32.71■■■□□ 2.83
CDKN3-204ENST00000442975 ZMYM3Q14202 1370 aa32.7■■■□□ 2.82
CDKN3-204ENST00000442975 CLTCQ00610 1675 aaKnown RBP32.69■■■□□ 2.82
CDKN3-204ENST00000442975 TCOF1Q13428 1488 aaKnown RBP32.68■■■□□ 2.82
CDKN3-204ENST00000442975 MROH2AA6NES4 1674 aa32.68■■■□□ 2.82
CDKN3-204ENST00000442975 ABCC5O15440 1437 aa32.67■■■□□ 2.82
CDKN3-204ENST00000442975 SHANK2Q9UPX8 1470 aa32.66■■■□□ 2.82
CDKN3-204ENST00000442975 DAPK1P53355 1430 aa32.64■■■□□ 2.82
CDKN3-204ENST00000442975 PPP6R1Q9UPN7 881 aa32.64■■■□□ 2.82
CDKN3-204ENST00000442975 NPATQ14207 1427 aa32.61■■■□□ 2.81
CDKN3-204ENST00000442975 CROCC2H7BZ55 1655 aa32.6■■■□□ 2.81
CDKN3-204ENST00000442975 KDM5DQ9BY66 1539 aa32.6■■■□□ 2.81
CDKN3-204ENST00000442975 KIF15Q9NS87 1388 aa32.59■■■□□ 2.81
CDKN3-204ENST00000442975 DNMT1P26358 1616 aaKnown RBP32.59■■■□□ 2.81
CDKN3-204ENST00000442975 FAM50AQ14320 339 aaKnown RBP32.59■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms