RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 MAGI2Q86UL8 1455 aa19.17■□□□□ 0.66
TTC28-203ENST00000442232 MADDQ8WXG6 1647 aa19.17■□□□□ 0.66
TTC28-203ENST00000442232 SCAPERQ9BY12 1400 aa19.17■□□□□ 0.66
TTC28-203ENST00000442232 PTPRMP28827 1452 aa19.16■□□□□ 0.66
TTC28-203ENST00000442232 POGZQ7Z3K3 1410 aa19.16■□□□□ 0.66
TTC28-203ENST00000442232 ARHGAP5Q13017 1502 aa19.15■□□□□ 0.66
TTC28-203ENST00000442232 EFCAB2Q5VUJ9 269 aa19.15■□□□□ 0.66
TTC28-203ENST00000442232 CASKIN1Q8WXD9 1431 aa19.15■□□□□ 0.66
TTC28-203ENST00000442232 RIMS1Q86UR5 1692 aaKnown RBP19.14■□□□□ 0.65
TTC28-203ENST00000442232 FYCO1Q9BQS8 1478 aa19.12■□□□□ 0.65
TTC28-203ENST00000442232 YEATS2Q9ULM3 1422 aa19.1■□□□□ 0.65
TTC28-203ENST00000442232 ZNF518AQ6AHZ1 1483 aa19.09■□□□□ 0.65
TTC28-203ENST00000442232 PREX2Q70Z35 1606 aa19.09■□□□□ 0.65
TTC28-203ENST00000442232 CDC42BPBQ9Y5S2 1711 aa19.08■□□□□ 0.64
TTC28-203ENST00000442232 FER1L4A9Z1Z3 1794 aa19.07■□□□□ 0.64
TTC28-203ENST00000442232 MYT1LQ9UL68 1186 aa19.05■□□□□ 0.64
TTC28-203ENST00000442232 C9orf84Q5VXU9 1444 aa19.05■□□□□ 0.64
TTC28-203ENST00000442232 SIGLEC1Q9BZZ2 1709 aa19.05■□□□□ 0.64
TTC28-203ENST00000442232 ATP10AO60312 1499 aa19.04■□□□□ 0.64
TTC28-203ENST00000442232 KDM5CP41229 1560 aa19.03■□□□□ 0.64
TTC28-203ENST00000442232 CDC42BPAQ5VT25 1732 aa19.03■□□□□ 0.64
TTC28-203ENST00000442232 MLECQ14165 292 aa19.02■□□□□ 0.64
TTC28-203ENST00000442232 ITSN2Q9NZM3 1697 aa19.01■□□□□ 0.63
TTC28-203ENST00000442232 ABCC1P33527 1531 aa19■□□□□ 0.63
TTC28-203ENST00000442232 PLPPR3Q6T4P5 718 aa18.99■□□□□ 0.63
TTC28-203ENST00000442232 AFAP1Q8N556 730 aa18.97■□□□□ 0.63
TTC28-203ENST00000442232 DIP2CQ9Y2E4 1556 aa18.97■□□□□ 0.63
TTC28-203ENST00000442232 ARHGEF12Q9NZN5 1544 aa18.96■□□□□ 0.63
TTC28-203ENST00000442232 LMTK3Q96Q04 1460 aa18.96■□□□□ 0.63
TTC28-203ENST00000442232 ABCA6Q8N139 1617 aa18.95■□□□□ 0.62
TTC28-203ENST00000442232 REREQ9P2R6 1566 aa18.94■□□□□ 0.62
TTC28-203ENST00000442232 MLH3Q9UHC1 1453 aa18.94■□□□□ 0.62
TTC28-203ENST00000442232 MTUS2Q5JR59 1369 aa18.93■□□□□ 0.62
TTC28-203ENST00000442232 ILDR1Q86SU0 546 aaPredicted RBP18.93■□□□□ 0.62
TTC28-203ENST00000442232 ZNF777Q9ULD5 760 aaPredicted RBP18.92■□□□□ 0.62
TTC28-203ENST00000442232 TRAPPC8Q9Y2L5 1435 aa18.91■□□□□ 0.62
TTC28-203ENST00000442232 SAMD9LQ8IVG5 1584 aa18.9■□□□□ 0.62
TTC28-203ENST00000442232 CCNB3Q8WWL7 1395 aa18.9■□□□□ 0.62
TTC28-203ENST00000442232 CEP162Q5TB80 1403 aa18.9■□□□□ 0.62
TTC28-203ENST00000442232 SYCP2Q9BX26 1530 aa18.9■□□□□ 0.62
TTC28-203ENST00000442232 PREX1Q8TCU6 1659 aa18.89■□□□□ 0.61
TTC28-203ENST00000442232 KIDINS220Q9ULH0 1771 aa18.89■□□□□ 0.61
TTC28-203ENST00000442232 PLEKHH2Q8IVE3 1493 aa18.89■□□□□ 0.61
TTC28-203ENST00000442232 EHBP1L1Q8N3D4 1523 aa18.89■□□□□ 0.61
TTC28-203ENST00000442232 GPATCH8Q9UKJ3 1502 aaKnown RBP18.89■□□□□ 0.61
TTC28-203ENST00000442232 ESF1Q9H501 851 aaKnown RBP18.87■□□□□ 0.61
TTC28-203ENST00000442232 AGLP35573 1532 aa18.86■□□□□ 0.61
TTC28-203ENST00000442232 CFDP1Q9UEE9 299 aaPredicted RBP18.86■□□□□ 0.61
TTC28-203ENST00000442232 SPAG9O60271 1321 aaKnown RBP18.83■□□□□ 0.61
TTC28-203ENST00000442232 TIAM1Q13009 1591 aa18.82■□□□□ 0.6
TTC28-203ENST00000442232 HSPA2P54652 639 aa18.82■□□□□ 0.6
TTC28-203ENST00000442232 ATP7AQ04656 1500 aa18.82■□□□□ 0.6
TTC28-203ENST00000442232 KIAA1107Q9UPP5 1409 aa18.82■□□□□ 0.6
TTC28-203ENST00000442232 C3P01024 1663 aa18.81■□□□□ 0.6
TTC28-203ENST00000442232 SETD1BQ9UPS6 1966 aaKnown RBP18.81■□□□□ 0.6
TTC28-203ENST00000442232 HNRNPMP52272 730 aaKnown RBP eCLIP18.8■□□□□ 0.6
TTC28-203ENST00000442232 INO80Q9ULG1 1556 aaPredicted RBP18.8■□□□□ 0.6
TTC28-203ENST00000442232 SUPT6HQ7KZ85 1726 aaKnown RBP18.8■□□□□ 0.6
TTC28-203ENST00000442232 CEBPAP49715 358 aaPredicted RBP18.79■□□□□ 0.6
TTC28-203ENST00000442232 UHRF1BP1Q6BDS2 1440 aa18.79■□□□□ 0.6
TTC28-203ENST00000442232 CNTLNQ9NXG0 1405 aa18.79■□□□□ 0.6
TTC28-203ENST00000442232 ADGBQ8N7X0 1667 aa18.76■□□□□ 0.59
TTC28-203ENST00000442232 MROH2AA6NES4 1674 aa18.76■□□□□ 0.59
TTC28-203ENST00000442232 FBXO41Q8TF61 875 aa18.74■□□□□ 0.59
TTC28-203ENST00000442232 PLXNC1O60486 1568 aa18.73■□□□□ 0.59
TTC28-203ENST00000442232 A2MP01023 1474 aa18.73■□□□□ 0.59
TTC28-203ENST00000442232 NCOA2Q15596 1464 aa18.71■□□□□ 0.59
TTC28-203ENST00000442232 VPS8Q8N3P4 1428 aa18.71■□□□□ 0.59
TTC28-203ENST00000442232 CLTCQ00610 1675 aaKnown RBP18.7■□□□□ 0.58
TTC28-203ENST00000442232 DMRT2Q9Y5R5 561 aa18.68■□□□□ 0.58
TTC28-203ENST00000442232 CAMSAP2Q08AD1 1489 aa18.68■□□□□ 0.58
TTC28-203ENST00000442232 ZNF644Q9H582 1327 aaPredicted RBP18.68■□□□□ 0.58
TTC28-203ENST00000442232 CCDC141Q6ZP82 1450 aa18.67■□□□□ 0.58
TTC28-203ENST00000442232 RTEL1-TNFRSF6BF6WH68 1400 aa18.66■□□□□ 0.58
TTC28-203ENST00000442232 MBD5Q9P267 1494 aa18.66■□□□□ 0.58
TTC28-203ENST00000442232 STRCQ7RTU9 1775 aa18.66■□□□□ 0.58
TTC28-203ENST00000442232 NPATQ14207 1427 aa18.66■□□□□ 0.58
TTC28-203ENST00000442232 LOC105371045A0A1W2PR82 267 aa18.65■□□□□ 0.58
TTC28-203ENST00000442232 GGT6Q6P531 493 aa18.64■□□□□ 0.57
TTC28-203ENST00000442232 LRRC9Q6ZRR7 1453 aa18.64■□□□□ 0.57
TTC28-203ENST00000442232 ZMYM3Q14202 1370 aa18.63■□□□□ 0.57
TTC28-203ENST00000442232 RSPH4AQ5TD94 716 aa18.62■□□□□ 0.57
TTC28-203ENST00000442232 ARHGEF5Q12774 1597 aa18.61■□□□□ 0.57
TTC28-203ENST00000442232 MAP3K1Q13233 1512 aa18.6■□□□□ 0.57
TTC28-203ENST00000442232 PPP6R1Q9UPN7 881 aa18.6■□□□□ 0.57
TTC28-203ENST00000442232 MYO3AQ8NEV4 1616 aa18.6■□□□□ 0.57
TTC28-203ENST00000442232 DHX29Q7Z478 1369 aaKnown RBP18.59■□□□□ 0.57
TTC28-203ENST00000442232 CERKQ8TCT0 537 aa18.59■□□□□ 0.57
TTC28-203ENST00000442232 ZNF142P52746 1687 aaPredicted RBP18.59■□□□□ 0.57
TTC28-203ENST00000442232 PTPRTO14522 1441 aa18.57■□□□□ 0.56
TTC28-203ENST00000442232 TSPY4P0CV99 314 aa18.57■□□□□ 0.56
TTC28-203ENST00000442232 TSPY10P0CW01 314 aa18.57■□□□□ 0.56
TTC28-203ENST00000442232 FAM135AQ9P2D6 1515 aa18.57■□□□□ 0.56
TTC28-203ENST00000442232 CAMSAP1Q5T5Y3 1602 aa18.56■□□□□ 0.56
TTC28-203ENST00000442232 NCOA1Q15788 1441 aa18.56■□□□□ 0.56
TTC28-203ENST00000442232 APLP2Q06481 763 aa18.55■□□□□ 0.56
TTC28-203ENST00000442232 PTPRKQ15262 1439 aa18.55■□□□□ 0.56
TTC28-203ENST00000442232 CEP170BQ9Y4F5 1589 aaPredicted RBP18.55■□□□□ 0.56
TTC28-203ENST00000442232 KDM5DQ9BY66 1539 aa18.54■□□□□ 0.56
TTC28-203ENST00000442232 KIF3BO15066 747 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms