RNA–Protein interactions for RNA: ENST00000441796.1

CRAT-204, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 5

Gene CRAT, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-204ENST00000441796 ARHGAP5Q13017 1502 aa36.43■■■■□ 3.42
CRAT-204ENST00000441796 POGZQ7Z3K3 1410 aa36.38■■■■□ 3.41
CRAT-204ENST00000441796 RICTORQ6R327 1708 aa36.37■■■■□ 3.41
CRAT-204ENST00000441796 PREX2Q70Z35 1606 aa36.34■■■■□ 3.41
CRAT-204ENST00000441796 ZMYM4Q5VZL5 1548 aa36.34■■■■□ 3.41
CRAT-204ENST00000441796 MAGI2Q86UL8 1455 aa36.32■■■■□ 3.41
CRAT-204ENST00000441796 EHBP1L1Q8N3D4 1523 aa36.32■■■■□ 3.4
CRAT-204ENST00000441796 GPATCH8Q9UKJ3 1502 aaKnown RBP36.32■■■■□ 3.4
CRAT-204ENST00000441796 CDC42BPBQ9Y5S2 1711 aa36.3■■■■□ 3.4
CRAT-204ENST00000441796 CCNB3Q8WWL7 1395 aa36.27■■■■□ 3.4
CRAT-204ENST00000441796 ZNF518AQ6AHZ1 1483 aa36.26■■■■□ 3.4
CRAT-204ENST00000441796 ARHGEF40Q8TER5 1519 aa36.25■■■■□ 3.39
CRAT-204ENST00000441796 TIAM1Q13009 1591 aa36.23■■■■□ 3.39
CRAT-204ENST00000441796 CDC42BPAQ5VT25 1732 aa36.23■■■■□ 3.39
CRAT-204ENST00000441796 AFAP1Q8N556 730 aa36.23■■■■□ 3.39
CRAT-204ENST00000441796 CFDP1Q9UEE9 299 aaPredicted RBP36.22■■■■□ 3.39
CRAT-204ENST00000441796 ZFYVE16Q7Z3T8 1539 aa36.22■■■■□ 3.39
CRAT-204ENST00000441796 YEATS2Q9ULM3 1422 aa36.21■■■■□ 3.39
CRAT-204ENST00000441796 ABCC1P33527 1531 aa36.2■■■■□ 3.39
CRAT-204ENST00000441796 MAP3K1Q13233 1512 aa36.19■■■■□ 3.38
CRAT-204ENST00000441796 ARHGEF12Q9NZN5 1544 aa36.18■■■■□ 3.38
CRAT-204ENST00000441796 ZNF777Q9ULD5 760 aaPredicted RBP36.18■■■■□ 3.38
CRAT-204ENST00000441796 KDM5CP41229 1560 aa36.17■■■■□ 3.38
CRAT-204ENST00000441796 TRAPPC8Q9Y2L5 1435 aa36.15■■■■□ 3.38
CRAT-204ENST00000441796 LRRC9Q6ZRR7 1453 aa36.14■■■■□ 3.38
CRAT-204ENST00000441796 ARID4BQ4LE39 1312 aaPredicted RBP36.13■■■■□ 3.37
CRAT-204ENST00000441796 KIAA1107Q9UPP5 1409 aa36.12■■■■□ 3.37
CRAT-204ENST00000441796 NCOA2Q15596 1464 aa36.11■■■■□ 3.37
CRAT-204ENST00000441796 SAMD9LQ8IVG5 1584 aa36.11■■■■□ 3.37
CRAT-204ENST00000441796 PLEKHH2Q8IVE3 1493 aa36.11■■■■□ 3.37
CRAT-204ENST00000441796 MLH3Q9UHC1 1453 aa36.1■■■■□ 3.37
CRAT-204ENST00000441796 ATP10AO60312 1499 aa36.09■■■■□ 3.37
CRAT-204ENST00000441796 ITSN2Q9NZM3 1697 aa36.07■■■■□ 3.36
CRAT-204ENST00000441796 SUPT6HQ7KZ85 1726 aaKnown RBP36.06■■■■□ 3.36
CRAT-204ENST00000441796 KANK4Q5T7N3 995 aaPredicted RBP36.06■■■■□ 3.36
CRAT-204ENST00000441796 HNRNPMP52272 730 aaKnown RBP eCLIP36.05■■■■□ 3.36
CRAT-204ENST00000441796 C9orf84Q5VXU9 1444 aa36.04■■■■□ 3.36
CRAT-204ENST00000441796 MYT1LQ9UL68 1186 aa36.04■■■■□ 3.36
CRAT-204ENST00000441796 SYCP2Q9BX26 1530 aa36.03■■■■□ 3.36
CRAT-204ENST00000441796 HECW2Q9P2P5 1572 aa36.03■■■■□ 3.36
CRAT-204ENST00000441796 APLP2Q06481 763 aa36.03■■■■□ 3.36
CRAT-204ENST00000441796 ZNF644Q9H582 1327 aaPredicted RBP36■■■■□ 3.35
CRAT-204ENST00000441796 ADAMTSL3P82987 1691 aa35.99■■■■□ 3.35
CRAT-204ENST00000441796 BCORL1Q5H9F3 1711 aa35.99■■■■□ 3.35
CRAT-204ENST00000441796 SPAG9O60271 1321 aaKnown RBP35.95■■■■□ 3.35
CRAT-204ENST00000441796 DIP2CQ9Y2E4 1556 aa35.93■■■■□ 3.34
CRAT-204ENST00000441796 MBD5Q9P267 1494 aa35.92■■■■□ 3.34
CRAT-204ENST00000441796 SIGLEC1Q9BZZ2 1709 aa35.91■■■■□ 3.34
CRAT-204ENST00000441796 REREQ9P2R6 1566 aa35.9■■■■□ 3.34
CRAT-204ENST00000441796 PTPRMP28827 1452 aa35.88■■■■□ 3.33
CRAT-204ENST00000441796 ABCA6Q8N139 1617 aa35.88■■■■□ 3.33
CRAT-204ENST00000441796 KIDINS220Q9ULH0 1771 aa35.87■■■■□ 3.33
CRAT-204ENST00000441796 RSPH4AQ5TD94 716 aa35.86■■■■□ 3.33
CRAT-204ENST00000441796 MLECQ14165 292 aa35.85■■■■□ 3.33
CRAT-204ENST00000441796 CAMSAP2Q08AD1 1489 aa35.85■■■■□ 3.33
CRAT-204ENST00000441796 MADDQ8WXG6 1647 aa35.84■■■■□ 3.33
CRAT-204ENST00000441796 AGLP35573 1532 aa35.82■■■■□ 3.32
CRAT-204ENST00000441796 MYOM3Q5VTT5 1437 aa35.82■■■■□ 3.32
CRAT-204ENST00000441796 MIA2Q96PC5 1412 aa35.82■■■■□ 3.32
CRAT-204ENST00000441796 ATP7AQ04656 1500 aa35.81■■■■□ 3.32
CRAT-204ENST00000441796 INO80Q9ULG1 1556 aaPredicted RBP35.78■■■■□ 3.32
CRAT-204ENST00000441796 RTEL1-TNFRSF6BF6WH68 1400 aa35.78■■■■□ 3.32
CRAT-204ENST00000441796 CCDC141Q6ZP82 1450 aa35.77■■■■□ 3.32
CRAT-204ENST00000441796 A2MP01023 1474 aa35.7■■■■□ 3.31
CRAT-204ENST00000441796 ARHGEF5Q12774 1597 aa35.7■■■■□ 3.31
CRAT-204ENST00000441796 RIMS1Q86UR5 1692 aaKnown RBP35.7■■■■□ 3.31
CRAT-204ENST00000441796 TSPY4P0CV99 314 aa35.67■■■■□ 3.3
CRAT-204ENST00000441796 TSPY10P0CW01 314 aa35.67■■■■□ 3.3
CRAT-204ENST00000441796 PLXNC1O60486 1568 aa35.64■■■■□ 3.3
CRAT-204ENST00000441796 FER1L4A9Z1Z3 1794 aa35.61■■■■□ 3.29
CRAT-204ENST00000441796 DHX29Q7Z478 1369 aaKnown RBP35.6■■■■□ 3.29
CRAT-204ENST00000441796 FGD6Q6ZV73 1430 aa35.58■■■■□ 3.29
CRAT-204ENST00000441796 ESF1Q9H501 851 aaKnown RBP35.57■■■■□ 3.28
CRAT-204ENST00000441796 ADGBQ8N7X0 1667 aa35.56■■■■□ 3.28
CRAT-204ENST00000441796 PLPPR3Q6T4P5 718 aa35.54■■■■□ 3.28
CRAT-204ENST00000441796 TCOF1Q13428 1488 aaKnown RBP35.54■■■■□ 3.28
CRAT-204ENST00000441796 CNTLNQ9NXG0 1405 aa35.53■■■■□ 3.28
CRAT-204ENST00000441796 MAST1Q9Y2H9 1570 aa35.51■■■■□ 3.28
CRAT-204ENST00000441796 PTPN23Q9H3S7 1636 aa35.51■■■■□ 3.28
CRAT-204ENST00000441796 CEBPAP49715 358 aaPredicted RBP35.51■■■■□ 3.28
CRAT-204ENST00000441796 PPP6R1Q9UPN7 881 aa35.5■■■■□ 3.27
CRAT-204ENST00000441796 GGT6Q6P531 493 aa35.48■■■■□ 3.27
CRAT-204ENST00000441796 ABCC5O15440 1437 aa35.47■■■■□ 3.27
CRAT-204ENST00000441796 LMTK3Q96Q04 1460 aa35.43■■■■□ 3.26
CRAT-204ENST00000441796 KIF3BO15066 747 aa35.42■■■■□ 3.26
CRAT-204ENST00000441796 SHANK2Q9UPX8 1470 aa35.41■■■■□ 3.26
CRAT-204ENST00000441796 DAPK1P53355 1430 aa35.4■■■■□ 3.26
CRAT-204ENST00000441796 ZMYM3Q14202 1370 aa35.38■■■■□ 3.26
CRAT-204ENST00000441796 DNMT1P26358 1616 aaKnown RBP35.35■■■■□ 3.25
CRAT-204ENST00000441796 FAM50AQ14320 339 aaKnown RBP35.32■■■■□ 3.24
CRAT-204ENST00000441796 MROH2AA6NES4 1674 aa35.32■■■■□ 3.24
CRAT-204ENST00000441796 C3P01024 1663 aa35.32■■■■□ 3.24
CRAT-204ENST00000441796 KIF15Q9NS87 1388 aa35.29■■■■□ 3.24
CRAT-204ENST00000441796 DUOX2Q9NRD8 1548 aa35.29■■■■□ 3.24
CRAT-204ENST00000441796 FAM135AQ9P2D6 1515 aa35.28■■■■□ 3.24
CRAT-204ENST00000441796 CROCC2H7BZ55 1655 aa35.28■■■■□ 3.24
CRAT-204ENST00000441796 NPATQ14207 1427 aa35.28■■■■□ 3.24
CRAT-204ENST00000441796 PPARGC1BQ86YN6 1023 aaKnown RBP35.26■■■■□ 3.24
CRAT-204ENST00000441796 RRP7BPQ9NSQ0 103 aa35.26■■■■□ 3.24
CRAT-204ENST00000441796 UHRF1BP1Q6BDS2 1440 aa35.25■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms